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  1. 1.   A high-resolution HLA reference panel capturing global population diversity enables multi-ancestry fine-mapping in HIV host response
  2. Luo, Yang; Kanai, Masahiro; Choi, Wanson; Li, Xinyi; Sakaue, Saori; Yamamoto, Kenichi; Ogawa, Kotaro; Gutierrez-Arcelus, Maria; Gregersen, Peter K.; Stuart, Philip E.; Elder, James T.; Forer, Lukas; Schoenherr, Sebastian; Fuchsberger, Christian; Smith, Albert V.; Fellay, Jacques; Carrington,Mary; Haas, David W.; Guo, Xiuqing; Palmer, Nicholette D.; Chen, Yii-Der Ida; Rotter, Jerome I.; Taylor, Kent D.; Rich, Stephen S.; Correa, Adolfo; Wilson, James G.; Kathiresan, Sekar; Cho, Michael H.; Metspalu, Andres; Esko, Tonu; Okada, Yukinori; Han, Buhm; McLaren, Paul J.; Raychaudhuri, Soumya
  3. Nature Genetics. 2021, Oct; 53(10): 1504-1516.
  1. 2.   Patterns of Human Leukocyte Antigen Class I and Class II Associations and Cancer
  2. Liu, Zhiwei; Derkach, Andriy; Yu, Kelly J.; Yeager, Meredith; Chang, Yu-Sun; Chen, Chien-Jen; Gyllensten, Ulf; Lan, Qing; Lee, Mei-Hsuan; McKay, James D.; Rothman, Nathaniel; Yang, Hwai-; Hildesheim, Allan; Pfeiffer, Ruth M.
  3. Cancer Research. 2021, Feb 15; 81(4): 1148-1152.
  1. 3.   Role of HLA-DP Expression in Graft-Versus-Host Disease After Unrelated Donor Transplantation
  2. Petersdorf, Effie W; Bengtsson, Mats; De Santis, Dianne; Dubois, Valerie; Fleischhauer, Katharina; Gooley, Ted; Horowitz, Mary; Madrigal, J Alejandro; Malkki, Mari; McKallor, Caroline; Morishima, Yasuo; Oudshoorn, Machteld; Spellman, Stephen R; Villard, Jean; Stevenson, Phil; Carrington,Mary
  3. Journal of clinical oncology : official journal of the American Society of Clinical Oncology. 2020, AUG 20; 38(24): 2712-+.
  1. 4.   The Interaction of LILRB2 with HLA-B is Associated with Psoriasis Susceptibility
  2. Yanovsky, Rebecca L; Chen, Haoyan; Leslie, Stephen; Carrington,Mary; Liao, Wilson
  3. The Journal of investigative dermatology. 2020, JUN; 140(6): 1292-+.
  1. 5.   APOL1 Nephropathy Risk Alleles and Risk of Sepsis in Blacks
  2. Chaudhary, Ninad S; Moore, Justin X; Zakai, Neil A; Judd, Suzanne E; Naik, Rakhi P; Limou, Sophie; Cushman, Mary; Lange, Leslie A; Wang, Henry E; Winkler,Cheryl; Irvin, Marguerite R; Kopp, Jeffrey B; Gutiérrez, Orlando M
  3. Clinical journal of the American Society of Nephrology : CJASN. 2019, Dec 6; 14(12): 1733-1740.
  1. 6.   Gene flow and pathogen transmission among bobcats (Lynx rufus) in a fragmented urban landscape
  2. Lee, J. S.; Ruell, E. W.; Boydston, E. E.; Lyren, L. M.; Alonso, R. S.; Troyer, J. L.; Crooks, K. R.; Vande Woude, S.
  3. Molecular Ecology. 2012, Apr; 21(7): 1617-1631.
  1. 7.   Fine mapping of 14q24.1 breast cancer susceptibility locus
  2. Lee, P.; Fu, Y. P.; Figueroa, J. D.; Prokunina-Olsson, L.; Gonzalez-Bosquet, J.; Kraft, P.; Wang, Z. M.; Jacobs, K. B.; Yeager, M.; Horner, M. J.; Hankinson, S. E.; Hutchinson, A.; Chatterjee, N.; Garcia-Closas, M.; Ziegler, R. G.; Berg, C. D.; Buys, S. S.; McCarty, C. A.; Feigelson, H. S.; Thun, M. J.; Diver, R.; Prentice, R.; Jackson, R.; Kooperberg, C.; Chlebowski, R.; Lissowska, J.; Peplonska, B.; Brinton, L. A.; Tucker, M.; Fraumeni, J. F.; Hoover, R. N.; Thomas, G.; Hunter, D. J.; Chanock, S. J.
  3. Human Genetics. 2012, Mar; 131(3): 479-490.
  1. 8.   Diversity of the KIR gene cluster in an urban Brazilian population
  2. Augusto, D. G.; Zehnder-Alves, L.; Pincerati, M. R.; Martin, M. P.; Carrington, M.; Petzl-Erler, M. L.
  3. Immunogenetics. 2012, Feb; 64(2): 143-152.
  1. 9.   Psoriasis Patients Are Enriched for Genetic Variants That Protect against HIV-1 Disease
  2. Chen, H. Y.; Hayashi, G.; Lai, O. Y.; Dilthey, A.; Kuebler, P. J.; Wong, T. V.; Martin, M. P.; Vina, M. A. F.; McVean, G.; Wabl, M.; Leslie, K. S.; Maurer, T.; Martin, J. N.; Deeks, S. G.; Carrington, M.; Bowcock, A. M.; Nixon, D. F.; Liao, W.
  3. Plos Genetics. 2012, Feb; 8(2):
  1. 10.   The Shaping of Modern Human Immune Systems by Multiregional Admixture with Archaic Humans
  2. Abi-Rached, L.; Jobin, M. J.; Kulkarni, S.; McWhinnie, A.; Dalva, K.; Gragert, L.; Babrzadeh, F.; Gharizadeh, B.; Luo, M.; Plummer, F. A.; Kimani, J.; Carrington, M.; Middleton, D.; Rajalingam, R.; Beksac, M.; Marsh, S. G. E.; Maiers, M.; Guethlein, L. A.; Tavoularis, S.; Little, A. M.; Green, R. E.; Norman, P. J.; Parham, P.
  3. Science. 2011, Oct; 333(6052): 89-94.
  1. 11.   HLA-A*7401-Mediated Control of HIV Viremia Is Independent of Its Linkage Disequilibrium with HLA-B*5703
  2. Matthews, P. C.; Adl, E.; Listgarten, J.; Leslie, A.; Mkhwanazi, N.; Carlson, J. M.; Harndahl, M.; Stryhn, A.; Payne, R. P.; Ogwu, A.; Huang, K. H. G.; Frater, J.; Paioni, P.; Kloverpris, H.; Jooste, P.; Goedhals, D.; van Vuuren, C.; Steyn, D.; Riddell, L.; Chen, F.; Luzzi, G.; Balachandran, T.; Ndung'u, T.; Buus, S.; Carrington, M.; Shapiro, R.; Heckerman, D.; Goulder, P. J. R.
  3. Journal of Immunology. 2011, May; 186(10): 5675-5686.
  1. 12.   Possession of HLA Class II DRB1*1303 Associates with Reduced Viral Loads in Chronic HIV-1 Clade C and B Infection
  2. Julg, B.; Moodley, E. S.; Qi, Y.; Ramduth, D.; Reddy, S.; Mncube, Z.; Gao, X. J.; Goulder, P. J.; Detels, R.; Ndung'u, T.; Walker, B. D.; Carrington, M.
  3. Journal of Infectious Diseases. 2011, Mar; 203(6): 803-809.
  1. 13.   Spontaneous Control of HCV Is Associated With Expression of HLA-B*57 and Preservation of Targeted Epitopes
  2. Kim, A. Y.; Kuntzen, T.; Timm, J.; Nolan, B. E.; Baca, M. A.; Reyor, L. L.; Berical, A. C.; Feller, A. J.; Johnson, K. L.; Zur Wiesch, J. S.; Robbins, G. K.; Chung, R. T.; Walker, B. D.; Carrington, M.; Allen, T. M.; Lauer, G. M.
  3. Gastroenterology. 2011, Feb; 140(2): 686-U434.
  1. 14.   HLA-Cw group 1 ligands for KIR increase susceptibility to invasive cervical cancer
  2. Martin, M. P.; Borecki, I. B.; Zhang, Z. Y.; Nguyen, L.; Ma, D. D.; Gao, X. J.; Qi, Y.; Carrington, M.; Rader, J. S.
  3. Immunogenetics. 2010, Dec; 62(11-12): 761-765.
  1. 15.   The Major Genetic Determinants of HIV-1 Control Affect HLA Class I Peptide Presentation
  2. Pereyra, F. P.; Jia, X. M.; McLaren, P. J.; Telenti, A.; de Bakker, P. I. W.; Walker, B. D.; Ripke, S.; Brumme, C. J.; Pulit, S. L.; Carrington, M.; Kadie, C. M.; Carlson, J. M.; Heckerman, D.; Graham, R. R.; Plenge, R. M.; Deeks, S. G.; Gianniny, L.; Crawford, G.; Sullivan, J.; Gonzalez, E.; Davies, L.; Camargo, A.; Moore, J. M.; Beattie, N.; Gupta, S.; Crenshaw, A.; Burtt, N. P.; Guiducci, C.; Gupta, N.; Gao, X. J.; Qi, Y.; Yuki, Y.; Piechocka-Trocha, A.; Cutrell, E.; Rosenberg, R.; Moss, K. L.; Lemay, P.; O'Leary, J.; Schaefer, T.; Verma, P.; Toth, I.; Block, B.; Baker, B.; Rothchild, A.; Lian, J.; Proudfoot, J.; Alvino, D. M. L.; Vine, S.; Addo, M. M.; Allen, T. M.; Altfeld, M.; Henn, M. R.; Le Gall, S.; Streeck, H.; Haas, D. W.; Kuritzkes, D. R.; Robbins, G. K.; Shafer, R. W.; Gulick, R. M.; Shikuma, C. M.; Haubrich, R.; Riddler, S.; Sax, P. E.; Daar, E. S.; Ribaudo, H. J.; Agan, B.; Agarwal, S.; Ahern, R. L.; Allen, B. L.; Altidor, S.; Altschuler, E. L.; Ambardar, S.; Anastos, K.; Anderson, B.; Anderson, V.; Andrady, U.; Antoniskis, D.; Bangsberg, D.; Barbaro, D.; Barrie, W.; Bartczak, J.; Barton, S.; Basden, P.; Basgoz, N.; Bazner, S.; Bellos, N. C.; Benson, A. M.; Berger, J.; Bernard, N. F.; Bernard, A. M.; Birch, C.; Bodner, S. J.; Bolan, R. K.; Boudreaux, E. T.; Bradley, M.; Braun, J. F.; Brndjar, J. E.; Brown, S. J.; Brown, K.; Brown, S. T.; Burack, J.; Bush, L. M.; Cafaro, V.; Campbell, O.; Campbell, J.; Carlson, R. H.; Carmichael, J. K.; Casey, K. K.; Cavacuiti, C.; Celestin, G.; Chambers, S. T.; Chez, N.; Chirch, L. M.; Cimoch, P. J.; Cohen, D.; Cohn, L. E.; Conway, B.; Cooper, D. A.; Cornelson, B.; Cox, D. T.; Cristofano, M. V.; Cuchural, G.; Czartoski, J. L.; Dahman, J. M.; Daly, J. S.; Davis, B. T.; Davis, K.; Davod, S. M.; DeJesus, E.; Dietz, C. A.; Dunham, E.; Dunn, M. E.; Ellerin, T. B.; Eron, J. J.; Fangman, J. J. W.; Farel, C. E.; Ferlazzo, H.; Fidler, S.; Fleenor-Ford, A.; Frankel, R.; Freedberg, K. A.; French, N. K.; Fuchs, J. D.; Fuller, J. D.; Gaberman, J.; Gallant, J. E.; Gandhi, R. T.; Garcia, E.; Garmon, D.; Gathe, J. C.; Gaultier, C. R.; Gebre, W.; Gilman, F. D.; Gilson, I.; Goepfert, P. A.; Gottlieb, M. S.; Goulston, C.; Groger, R. K.; Gurley, T. D.; Haber, S.; Hardwicke, R.; Hardy, W. D.; Harrigan, P. R.; Hawkins, T. N.; Heath, S.; Hecht, F. M.; Henry, W. K.; Hladek, M.; Hoffman, R. P.; Horton, J. M.; Hsu, R. K.; Huhn, G. D.; Hunt, P.; Hupert, M. J.; Illeman, M. L.; Jaeger, H.; Jellinger, R. M.; John, M.; Johnson, J. A.; Johnson, K. L.; Johnson, H.; Johnson, K.; Joly, J.; Jordan, W. C.; Kauffman, C. A.; Khanlou, H.; Killian, R. K.; Kim, A. Y.; Kim, D. D.; Kinder, C. A.; Kirchner, J. T.; Kogelman, L.; Kojic, E. M.; Korthuis, T.; Kurisu, W.; Kwon, D. S.; LaMar, M.; Lampiris, H.; Lanzafame, M.; Lederman, M. M.; Lee, D. M.; Lee, J. M. L.; Lee, M. J.; Lee, E. T. Y.; Lemoine, J.; Levy, J. A.; Llibre, J. M.; Liguori, M. A.; Little, S. J.; Liu, A. Y.; Lopez, A. J.; Loutfy, M. R.; Loy, D.; Mohammed, D. Y.; Man, A.; Mansour, M. K.; Marconi, V. C.; Markowitz, M.; Marques, R.; Martin, J. N.; Martin, H. L.; Mayer, K. H.; McElrath, M. J.; McGhee, T. A.; McGovern, B. H.; McGowan, K.; McIntyre, D.; McLeod, G. X.; Menezes, P.; Mesa, G.; Metroka, C. E.; Meyer-Olson, D.; Miller, A. O.; Montgomery, K.; Mounzer, K. C.; Nagami, E. H.; Nagin, I.; Nahass, R. G.; Nelson, M. O.; Nielsen, C.; Norene, D. L.; O'Connor, D. H.; Ojikutu, B. O.; Okulicz, J.; Oladehin, O. O.; Oldfield, E. C.; Olender, S. A.; Ostrowski, M.; Owen, W. F.; Pae, E.; Parsonnet, J.; Pavlatos, A. M.; Perlmutter, A. M.; Pierce, M. N.; Pincus, J. M.; Pisani, L.; Price, L. J.; Proia, L.; Prokesch, R. C.; Pujet, H. C.; Ramgopal, M.; Rathod, A.; Rausch, M.; Ravishankar, J.; Rhame, F. S.; Richards, C. S.; Richman, D. D.; Rodes, B.; Rodriguez, M.; Rose, R. C.; Rosenberg, E. S.; Rosenthal, D.; Ross, P. E.; Rubin, D. S.; Rumbaugh, E.; Saenz, L.; Salvaggio, M. R.; Sanchez, W. C.; Sanjana, V. M.; Santiago, S.; Schmidt, W.; Schuitemaker, H.; Sestak, P. M.; Shalit, P.; Shay, W.; Shirvani, V. N.; Silebi, V. I.; Sizemore, J. M.; Skolnik, P. R.; Sokol-Anderson, M.; Sosman, J. M.; Stabile, P.; Stapleton, J. T.; Starrett, S.; Stein, F.; Stellbrink, H. J.; Sterman, F. L.; Stone, V. E.; Stone, D. R.; Tambussi, G.; Taplitz, R. A.; Tedaldi, E. M.; Theisen, W.; Torres, R.; Tosiello, L.; Tremblay, C.; Tribble, M. A.; Trinh, P. D.; Tsao, A.; Ueda, P.; Vaccaro, A.; Valadas, E.; Vanig, T. J.; Vecino, I.; Vega, V. M.; Veikley, W.; Wade, B. H.; Walworth, C.; Wanidworanun, C.; Ward, D. J.; Warner, D. A.; Weber, R. D.; Webster, D.; Weis, S.; Wheeler, D. A.; White, D. J.; Wilkins, E.; Winston, A.; Wlodaver, C. G.; van't Wout, A.; Wright, D. P.; Yang, O. O.; Yurdin, D. L.; Zabukovic, B. W.; Zachary, K. C.; Zeeman, B.; Zhao, M.; Int, H. I. V. C. S.
  3. Science. 2010, Dec; 330(6010): 1551-1557.
  1. 16.   Alterations in Natural Killer Cell Receptor Profiles During HIV Type 1 Disease Progression Among Chronically Infected South African Adults
  2. Wong, A. H. W.; Williams, K.; Reddy, S.; Wilson, D.; Giddy, J.; Alter, G.; Ghebremichael, M.; Carrington, M. N.; Ndung'u, T.; Walker, B. D.; Altfeld, M.; Carr, W. H.
  3. Aids Research and Human Retroviruses. 2010, Apr; 26(4): 459-469.
  1. 17.   MHC Heterozygote Advantage in Simian Immunodeficiency Virus-Infected Mauritian Cynomolgus Macaques
  2. O'Connor, S. L.; Lhost, J. J.; Becker, E. A.; Detmer, A. M.; Johnson, R. C.; MacNair, C. E.; Wiseman, R. W.; Karl, J. A.; Greene, J. M.; Burwitz, B. J.; Bimber, B. N.; Lank, S. M.; Tuscher, J. J.; Mee, E. T.; Rose, N. J.; Desrosiers, R. C.; Hughes, A. L.; Friedrich, T. C.; Carrington, M.; O'Connor, D. H.
  3. Science Translational Medicine. 2010, Mar; 2(22): 9.
  1. 18.   Multistage Genomewide Association Study Identifies a Locus at 1q41 Associated with Rate of HIV-1 Disease Progression to Clinical AIDS
  2. Herbeck, J. T.; Gottlieb, G. S.; Winkler, C. A.; Nelson, G. W.; An, P.; Maust, B. S.; Wong, K. G.; Troyer, J. L.; Goedert, J. J.; Kessing, B. D.; Detels, R.; Wolinsky, S. M.; Martinson, J.; Buchbinder, S.; Kirk, G. D.; Jacobson, L. P.; Margolick, J. B.; Kaslow, R. A.; O'Brien, S. J.; Mullins, J. I.
  3. Journal of Infectious Diseases. 2010, Feb; 201(4): 618-626.
  1. 19.   Is There a Genetic Basis for Health Disparities in Human Immunodeficiency Virus Disease?
  2. Winkler, C.
  3. Mount Sinai Journal of Medicine. 2010, Mar-Apr; 77(2): 149-159.
  1. 20.   Impact of Select Immunologic and Virologic Biomarkers on CD4 Cell Count Decrease in Patients with Chronic HIV-1 Subtype C Infection: Results from Sinikithemba Cohort, Durban, South Africa
  2. Brumme, Z.; Wang, B. X.; Nair, K.; Brumme, C.; de Pierres, C.; Reddy, S.; Julg, B.; Moodley, E.; Thobakgale, C.; Lu, Z.; van der Stok, M.; Bishop, K.; Mncube, Z.; Chonco, F.; Yuki, Y.; Frahm, N.; Brander, C.; Carrington, M.; Freedberg, K.; Kiepiela
  3. Clinical Infectious Diseases. 2009 49(6): 956-964.
  1. 21.   Multiplex Manager 1.0: a cross-platform computer program that plans and optimizes multiplex PCR
  2. Holleley, C. E.; Geerts, P. G.
  3. Biotechniques. 2009 46(7): 511-517.
  1. 22.   Molecular genetic evidence for social group disruption of wild vicunas Vicugna vicugna captured for wool harvest in Chile
  2. Sarno, R. J.; Gonzalez, B. A.; Bonacic, C.; Zapata, B.; O'Brien, S. J.; Johnson, W. E.
  3. Small Ruminant Research. 2009 84(1-3): 28-34.
  1. 23.   High-throughput single nucleotide polymorphism genotyping using nanofluidic Dynamic Arrays
  2. Wang, J.; Lin, M.; Crenshaw, A.; Hutchinson, A.; Hicks, B.; Yeager, M.; Berndt, S.; Huang, W. Y.; Hayes, R. B.; Chanock, S. J.; Jones, R. C.; Ramakrishnan, R.
  3. Bmc Genomics. 2009 10
  1. 24.   Statistical Resolution of Ambiguous HLA Typing Data
  2. Listgarten, J.; Brumme, Z.; Kadie, C.; Gao, X. J.; Walker, B.; Carrington, M.; Goulder, P.; Heckerman, D.
  3. Plos Computational Biology. 2008 4(2):
  1. 25.   Maternal HLA homozygosity and mother-child HLA concordance increase the risk of vertical transmission of HIV-1
  2. Mackelprang, R. D.; John-Stewart, G.; Carrington, M.; Richardson, B.; Rowland-Jones, S.; Gao, X.; Mbori-Ngacha, D.; Mabuka, J.; Lohman-Payne, B.; Farquhar, C.
  3. Journal of Infectious Diseases. 2008 197(8): 1156-1161.
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