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  1. 1.   A monomeric envelope glycoprotein cytoplasmic tail is sufficient for HIV-1 Gag lattice trapping and incorporation
  2. Groves, Nicholas S; Clark, Austin R; Aguilar, Rebekah S; Hikichi,Yuta; Kostenko, Anastasiia; Bruns, Merissa M; Aron, Alegra T; Freed,Eric; van Engelenburg, Schuyler B
  3. Journal of virology. 2025, Apr 15; e0210524.
  1. 2.   Bromodomain protein BRD4 directs mitotic cell division of mouse fibroblasts by inhibiting DNA damage
  2. Wu, Tiyun; Hou, Haitong; Dey, Anup; Bachu, Mahesh; Chen,Jack; Wisniewski, Jan; Kudoh, Fuki; Chen, Chao; Chauhan, Sakshi; Xiao, Hua; Pan, Richard; Ozato, Keiko
  3. iScience. 2024, Jul 19; 27(7): 109797.
  1. 3.   Protocol for measuring BRAF autoinhibition in live cells using a proximity-based NanoBRET assay
  2. Smith,Russell; Morrison,Deborah
  3. STAR Protocols. 2023, Aug 16; 4(3): 102461.
  1. 4.   Reserpine maintains photoreceptor survival in retinal ciliopathy by resolving proteostasis imbalance and ciliogenesis defects
  2. Chen, Holly Y; Swaroop, Manju; Papal, Samantha; Mondal, Anupam; Song, Hyun Beom; Campello, Laura; Tawa, Gregory; Regent, Florian; Shimada, Hiroko; Nagashima, Kunio; de Val, Natalia; Jacobson, Samuel G; Zheng, Wei; Swaroop, Anand
  3. eLife. 2023, Mar 28; 12
  1. 5.   Manganese enhances DNA- or RNA-mediated innate immune response by inducing phosphorylation of TANK-binding kinase 1
  2. Sui, Hongyan; Chen, Qian; Yang, Jun; Srirattanapirom, Selena; Imamichi, Tomozumi
  3. iScience. 2022, Nov 18; 25(11): 105352.
  1. 6.   A transient conformation facilitates ligand binding to the adenine riboswitch
  2. Wu, Lin; Chen, Dian; Ding,Jienyu; Liu, Yu
  3. iScience. 2021, Dec 17; 24(12): 103512.
  1. 7.   A molecular mechanism for the generation of ligand-dependent differential outputs by the epidermal growth factor receptor
  2. Huang, Yongjian; Ognjenovic,Jana; Karandur, Deepti; Miller, Kate; Merk,Alan; Subramaniam, Sriram; Kuriyan, John
  3. Elife. 2021, Nov 30; 10
  1. 8.   Nitric Oxide Modulates Metabolic Processes in the Tumor Immune Microenvironment
  2. McGinity,Chris; Palmieri,Erika; Somasundaram, Veena; Bhattacharyya,Dana; Ridnour,Lisa; Cheng,Robert; Ryan, Aideen E.; Glynn, Sharon A.; Thomas, Douglas D.; Miranda, Katrina M.; Anderson,Steve; Lockett,Stephen; McVicar,Daniel; Wink,David
  3. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. 2021, Jul; 22(13):
  1. 9.   An optimized protocol for acquiring and processing cryo-EM data of human 26S proteasome with M1-Ub6
  2. Chen,Xiang; Shi,Dan; Zhang,Ping; Walters,Kylie
  3. STAR protocols. 2021, Mar 19; 2(1): 100278.
  1. 10.   Glycan Positioning Impacts HIV-1 Env Glycan-Shield Density, Function, and Recognition by Antibodies
  2. Wei, Qing; Hargett, Audra A; Knoppova, Barbora; Duverger, Alexandra; Rawi, Reda; Shen, Chen-Hsiang; Farney, S Katie; Hall, Stacy; Brown, Rhubell; Keele,Brandon; Heath, Sonya L; Saag, Michael S; Kutsch, Olaf; Chuang, Gwo-Yu; Kwong, Peter D; Moldoveanu, Zina; Raska, Milan; Renfrow, Matthew B; Novak, Jan
  3. iScience. 2020, Nov 20; 23(11): 101711.
  1. 11.   A simple colorimetric experiment using mammalian cell culture to study metabolism
  2. Sharma, Kanika; Fizet, Kiel J; Montgomery, Kathlyene R; Smeltzer, Nathan A; Sikorski, Madison H; Brown, Kennedy G; Beyke, Brandon J; Burkhart, Ryan C; Lynn, Abigail N; Grandinetti, Giovanna
  3. Biochemistry and molecular biology education : a bimonthly publication of the International Union of Biochemistry and Molecular Biology. 2020, Sep 17;
  1. 12.   Fully Processed Recombinant KRAS4b: Isolating and Characterizing the Farnesylated and Methylated Protein
  2. Agamasu,Constance; Frank,Peter; Perkins,Shelley; Waybright,Tim; Messing,Simon; Gillette,Bill; Stephen,Andy
  3. Journal of visualized experiments : JoVE. 2020, Jan 16; (155):
  1. 13.   Tumor-targeting Salmonella typhimurium A1-R suppressed an imatinib-resistant gastrointestinal stromal tumor with c-kit exon 11 and 17 mutations
  2. Miyake, Kentaro; Kawaguchi, Kei; Miyake, Masuyo; Zhao, Ming; Kiyuna, Tasuku; Igarashi, Kentaro; Zhang, Zhiying; Murakami, Takashi; Li, Yunfeng; Nelson, Scott D; Bouvet, Michael; Elliott, Irmina; Russell, Tara A; Singh, Arun S; Hiroshima, Yukihiko; Momiyama, Masashi; Matsuyama, Ryusei; Chishima, Takashi; Singh, Shree Ram; Endo, Itaru; Eilber, Fritz C; Hoffman, Robert M
  3. Heliyon. 2018, Jun 6; 4(6): e00643.
  1. 14.   Targeting RAS driven human cancer cells with antibodies to upregulated and essential cell-surface proteins
  2. Martinko, Alexander John; Truillet, Charles; Julien, Olivier; Diaz, Juan; Horlbeck, Max A; Whiteley, Gordon; Blonder, Josip; Weissman, Jonathan S; Bandyopadhyay, Sourav; Evans, Michael; Wells, James A
  3. eLife. 2018, Jan 23; 7: pii: e31098.
  1. 15.   Factors That Contribute to Assay Variation in Quantitative Analysis of Sex Steroid Hormones Using Liquid and Gas Chromatography-Mass Spectrometry
  2. Xu, X.; Veenstra, T. D.
  3. Journal of Chemical Education. 2012, Feb; 89(2): 230-233.
  1. 16.   RsiteDB: a database of protein binding pockets that interact with RNA nucleotide bases
  2. Shulman-Peleg, A.; Nussinov, R.; Wolfson, H. J.
  3. Nucleic Acids Research. 2009 37(Database issue): D369-D373.
  1. 17.   Protein-DNA interactions: structural, thermodynamic and clustering patterns of conserved residues in DNA-binding proteins
  2. Ahmad, S.; Keskin, O.; Sarai, A.; Nussinov, R.
  3. Nucleic Acids Research. 2008 36(18): 5922-5932.
  1. 18.   Extensive variation between inbred mouse strains due to endogenous L1 retrotransposition
  2. Akagi, K.; Li, J. F.; Stephens, R. M.; Volfovsky, N.; Symer, D. E.
  3. Genome Research. 2008 18(6): 869-880.
  1. 19.   A microarray analysis for differential gene expression for two cancer cell lines, DU145 non-drug resistant and RC.01 drug-resistant using R & bioconductor
  2. Alvord, W. G.; Roayaei, J. A.; Reinhold, W. C.; Quinones, O. A.; Weinstein, J. N.
  3. Amino Acids. 2008 35(4): 775-776.
  1. 20.   Crystal engineering of HIV-1 reverse transcriptase for structure-based drug design
  2. Bauman, J. D.; Das, K.; Ho, W. C.; Baweja, M.; Himmel, D. M.; Clark, A. D.; Oren, D. A.; Boyer, P. L.; Hughes, S. H.; Shatkin, A. J.; Arnold, E.
  3. Nucleic Acids Research. 2008 36(15): 5083-5092.
  1. 21.   Intracellular interaction of interleukin-15 with its receptor alpha during production leads to mutual stabilization and increased bioactivity
  2. Bergamaschi, C.; Rosati, M.; Jalah, R.; Valentin, A.; Kulkarni, V.; Alicea, C.; Zhang, G. M.; Patel, V.; Felber, B. K.; Pavlakis, G. N.
  3. Journal of Biological Chemistry. 2008 283(7): 4189-4199.
  1. 22.   Pooled analysis of genetic variation at chromosome 8q24 and colorectal neoplasia risk
  2. Berndt, S. I.; Potter, J. D.; Hazra, A.; Yeager, M.; Thomas, G.; Makar, K. W.; Welch, R.; Cross, A. J.; Huang, W. Y.; Schoen, R. E.; Giovannucci, E.; Chan, A. T.; Chanock, S. J.; Peters, U.; Hunter, D. J.; Hayes, R. B.
  3. Human Molecular Genetics. 2008 17(17): 2665-2672.
  1. 23.   RNAJunction: a database of RNA junctions and kissing loops for three-dimensional structural analysis and nanodesign
  2. Bindewald, E.; Hayes, R.; Yingling, Y. G.; Kasprzak, W.; Shapiro, B. A.
  3. Nucleic Acids Research. 2008 36: D392-D397.
  1. 24.   A method of HIV-1 inactivation compatible with antibody-based depletion of abundant proteins from plasma
  2. Bosley, A.; Marshall, H. N.; Badralmaa, Y.; Natarajan, V.
  3. Proteomics Clinical Applications. 2008 2(6): 904-907.
  1. 25.   Protein kinase R-dependent regulation of interleukin-10 in response to double-stranded RNA
  2. Chakrabarti, A.; Sadler, A. J.; Kar, N.; Young, H. A.; Silverman, R. H.; Williams, B.
  3. Journal of Biological Chemistry. 2008 283(37): 25132-25139.
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