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  1. 1.   RrA, an enzyme from Rhodospirillum rubrum, is a prototype of a new family of short-chain L-asparaginases
  2. Zhang,Di; Czapinska, Honorata; Bochtler, Matthias; Wlodawer,Alexander; Lubkowski,Jacek
  3. Protein Science : a publication of the Protein Society. 2024, Apr; 33(4): e4920.
  1. 2.   Recapitulation of cell-like KRAS4b membrane dynamics on complex biomimetic membranes
  2. Shrestha,Rebika; Chen,De; Frank,Peter; Nissley,Dwight; Turbyville,Tommy
  3. iScience. 2021, Dec 10; 25(1):
  1. 3.   A molecular mechanism for the generation of ligand-dependent differential outputs by the epidermal growth factor receptor
  2. Huang, Yongjian; Ognjenovic,Jana; Karandur, Deepti; Miller, Kate; Merk,Alan; Subramaniam, Sriram; Kuriyan, John
  3. Elife. 2021, Nov 30; 10
  1. 4.   An optimized protocol for acquiring and processing cryo-EM data of human 26S proteasome with M1-Ub6
  2. Chen,Xiang; Shi,Dan; Zhang,Ping; Walters,Kylie
  3. STAR protocols. 2021, Mar 19; 2(1): 100278.
  1. 5.   Design and characterization of mutant and wild-type huntingtin proteins produced from a toolkit of scalable eukaryotic expression systems
  2. Harding, Rachel J; Loppnau, Peter; Ackloo, Suzanne; Lemak, Alexander; Hutchinson, Ashley; Hunt, Brittany; Holehouse, Alex S; Ho, Jolene C; Fan, Lixin; Toledo-Sherman, Leticia; Seitova, Alma; Arrowsmith, Cheryl H
  3. The Journal of biological chemistry. 2019, APR 26; 294(17): 6986-7001.
  1. 6.   Development and Evaluation of Stimuli-Responsive Chimeric Nanostructures
  2. Naziris, Nikolaos; Pippa, Natassa; Stellas, Dimitrios; Chrysostomou, Varvara; Pispas, Stergios; Demetzos, Costas; Libera, Marcin; Trzebicka, Barbara
  3. AAPS PharmSciTech. 2018, Oct; 19(7): 2971-2989.
  1. 7.   Single-particle cryo-EM structure of a voltage-activated potassium channel in lipid nanodiscs
  2. Matthies, Doreen; Bae, Chanhyung; Toombes, Gilman Es; Fox, Tara; Bartesaghi, Alberto; Subramaniam, Sriram; Swartz, Kenton Jon
  3. eLife. 2018, Aug 15; 7: pii: e37558.
  1. 8.   Efficient support of virus-like particle assembly by the HIV-1 packaging signal
  2. Comas-Garcia, Mauricio; Kroupa, Tomas; Datta, Siddhartha; Harvin, Demetria; Hu, Wei-Shau; Rein, Alan
  3. eLife. 2018, Aug 2; 7: pii: e38438.
  1. 9.   Dissection of specific binding of HIV-1 Gag to the "packaging signal" in viral RNA.
  2. Comas Garcia, Mauricio; Datta, Siddhartha; Baker, Laura; Varma, Rajat; Gudla, Prabhakar; Rein, Alan
  3. eLife. 2017, Jul 20; 6: pii: e27055.
  1. 10.   Farnesylated and methylated KRAS4b: high yield production of protein suitable for biophysical studies of prenylated protein-lipid interactions
  2. Gillette, W. K.; Esposito, D.; Abreu Blanco, M.; Alexander, P.; Bindu, L.; Bittner, C.; Chertov, O.; Frank, P. H.; Grose, C.; Jones, J. E.; Meng, Z.; Perkins, S.; Van, Q.; Ghirlando, R.; Fivash, M.; Nissley, D. V.; McCormick, F.; Holderfield, M.; Stephen, A. G.
  3. Scientific Reports. 2015 5: 15916.
  1. 11.   Determination of protein structures - A series of fortunate events
  2. Chruszcz, M.; Wlodawer, A.; Minor, W.
  3. Biophysical Journal. 2008 95(1): 1-9.
  1. 12.   HingeProt: Automated prediction of hinges in protein structures
  2. Emekli, U.; Schneidman-Duhovny, D.; Wolfson, H. J.; Nussinov, R.; Haliloglu, T.
  3. Proteins-Structure Function and Bioinformatics. 2008 70(4): 1219-1227.
  1. 13.   Expression of POTE protein in human testis detected by novel monoclonal antibodies
  2. Ise, T.; Das, S.; Nagata, S.; Maeda, H.; Lee, Y.; Onda, M.; Anver, M. R.; Bera, T. K.; Pastan, I.
  3. Biochemical and Biophysical Research Communications. 2008 365(4): 603-608.
  1. 14.   Constructing templates for protein structure prediction by simulation of protein folding pathways
  2. Kifer, I.; Nussinov, R.; Wolfson, H. J.
  3. Proteins-Structure Function and Bioinformatics. 2008 73(2): 380-394.
  1. 15.   Sizing the Bacillus anthracis PA(63) channel with nonelectrolyte poly(ethylene glycols)
  2. Nablo, B. J.; Halverson, K. M.; Robertson, J.; Nguyen, T. L.; Panchal, R. G.; Gussio, R.; Bavari, S.; Krasilnikov, O. V.; Kasianowicz, J. J.
  3. Biophysical Journal. 2008 95(3): 1157-1164.
  1. 16.   Structure of an isolated unglycosylated antibody C(H)2 domain
  2. Prabakaran, P.; Vu, B. K.; Gan, J. H.; Feng, Y.; Dimitrov, D. S.; Ji, X. H.
  3. Acta Crystallographica Section D-Biological Crystallography. 2008 64: 1062-1067.
  1. 17.   Complete inactivation of venezuelan equine encephalitis virus by 1,5-iodonaphthylazide (vol 358, pg 392, 2007)
  2. Sharma, A.; Raviv, Y.; Puri, A.; Viard, M.; Blumenthal, R.; Maheshwari, R. K.
  3. Biochemical and Biophysical Research Communications. 2008 368(2): 453-453 DI 10.1016/j.bbr.
  1. 18.   Structure of RapA, a Swi2/Snf2 protein that recycles RNA polymerase during transcription
  2. Shaw, G.; Gan, J. H.; Zhou, Y. N.; Zhi, H. J.; Subburaman, P.; Zhang, R. G.; Joachimiak, A.; Jin, D. J.; Ji, X. H.
  3. Structure. 2008 16(9): 1417-1427.
  1. 19.   Impact of low-frequency hotspot mutation R282Q on the structure of p53 DNA-binding domain as revealed by crystallography at 1.54 angstrom resolution
  2. Tu, C.; Tan, Y. H.; Shaw, G.; Zhou, Z.; Bai, Y.; Luo, R.; Ji, X. H.
  3. Acta Crystallographica Section D-Biological Crystallography. 2008 64: 471-477 907.
  1. 20.   Restricted mobility of conserved residues in protein-protein interfaces in molecular simulations
  2. Yogurtcu, O. N.; Erdemli, S. B.; Nussinov, R.; Turkay, M.; Keskin, O.
  3. Biophysical Journal. 2008 94(9): 3475-3485.
  1. 21.   The C-terminal transmembrane domain of Bcl-x(L) mediates changes in mitochondrial morphology
  2. Zheng, J. Y.; Tsai, Y. C.; Kadimcherla, P.; Zhang, R.; Shi, J.; Oyler, G. A.; Boustany, N. N.
  3. Biophysical Journal. 2008 94(1): 286-297.
  1. 22.   A Potent Peptidomimetic Inhibitor of Botulinum Neurotoxin Serotype A Has a Very Different Conformation than SNAP-25 Substrate
  2. Zuniga, J. E.; Schmidt, J. J.; Fenn, T.; Burnett, J. C.; Arac, D.; Gussio, R.; Stafford, R. G.; Badie, S. S.; Bavari, S.; Brunger, A. T.
  3. Structure. 2008 16(10): 1588-1597.
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