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  1. 1.   Harnessing molecular recognition for small molecule-mediated, reversible photochemical control over mRNA translation
  2. Parmar,Shaifaly; Tenney, Logan; Liang, Xiao; Routzahn,John; Sibley, Christopher D; Schneekloth,John
  3. Angewandte Chemie (International ed. in English). 2025, Mar 31; e202503078.
  1. 2.   Repeated horizontal acquisition of lagriamide-producing symbionts in Lagriinae beetles
  2. Uppal, Siddharth; Simonson,Sam Waterworth; Nick, Alina; Vogel, Heiko; Flórez, Laura V; Kaltenpoth, Martin; Kwan, Jason C
  3. The ISME Journal. 2024, Oct 23;
  1. 3.   Correlation of protein binding pocket properties with hits' chemistries used in generation of ultra-large virtual libraries
  2. Song, Robert X; Nicklaus,Marc; Tarasova,Nadya
  3. Journal of Computer-Aided Molecular Design. 2024, May 16; 38(1): 22.
  1. 4.   Effects of Xylanase A double mutation on substrate specificity and structural dynamics
  2. MacDonald, Meagan E; Wells, Nicholas G M; Hassan,Bakar; Dudley, Joshua A; Walters,Kylie; Korzhnev, Dmitry M; Aramini, James M; Smith, Colin A
  3. Journal of Structural Biology. 2024, Mar 02; 108082.
  1. 5.   Advancements in Nanoparticle Characterization
  2. Crist,Rachael; Clogston,Jeffrey; Stern,Steve; Dobrovolskaia,Marina
  3. Methods in Molecular Biology (Clifton, N.J.). 2024 2789: 3-17.
  1. 6.   Tools and tactics to define specificity of metabolic chemical reporters
  2. Mukherjee, Mana Mohan; Bond, Michelle R; Abramowitz, Lara K; Biesbrock, Devin; Woodroofe, Carolyn C; Kim, Eun Ju; Swenson, Rolf E; Hanover, John A
  3. Frontiers in Molecular Biosciences. 2023, Dec 7; 10: 1286690.
  1. 7.   Detection of the DNA binding of transcription factors in situ at the single-cell resolution in cultured cells by proximity ligation assay
  2. Ram,Babul; Dai,Chengkai
  3. STAR Protocols. 2023, Nov 01; 4(4): 102692.
  1. 8.   Reserpine maintains photoreceptor survival in retinal ciliopathy by resolving proteostasis imbalance and ciliogenesis defects
  2. Chen, Holly Y; Swaroop, Manju; Papal, Samantha; Mondal, Anupam; Song, Hyun Beom; Campello, Laura; Tawa, Gregory; Regent, Florian; Shimada, Hiroko; Nagashima, Kunio; de Val, Natalia; Jacobson, Samuel G; Zheng, Wei; Swaroop, Anand
  3. eLife. 2023, Mar 28; 12
  1. 9.   Multitarget Potential of Phytochemicals from Traditional Medicinal Tree, Terminalia arjuna (Roxb. ex DC.) Wight & Arnot as Potential Medicaments for Cardiovascular Disease: An In-Silico Approach
  2. Kumar, Vikas; Sharma, Nitin; Orfali, Raha; Patel,Chiragkumar; Alnajjar, Radwan; Saini, Rakshandha; Sourirajan, Anuradha; Khosla, Prem Kumar; Dev, Kamal; Perveen, Shagufta
  3. Molecules (Basel, Switzerland). 2023, Jan 20; 28(3):
  1. 10.   Conformational Dynamics Allows Sampling of an "Active-like" State by Oncogenic K-Ras-GDP
  2. Grudzien, Patrick; Jang,Hyunbum; Leschinsky, Nicholas; Nussinov,Ruth; Gaponenko, Vadim
  3. Journal of Molecular Biology. 2022, Jun 22; 167695.
  1. 11.   Exploration of Ultralarge Compound Collections for Drug Discovery
  2. Warr, Wendy A; Nicklaus,Marc; Nicolaou, Christos A; Rarey, Matthias
  3. Journal of Chemical Information and Modeling. 2022, Apr 14;
  1. 12.   A molecular mechanism for the generation of ligand-dependent differential outputs by the epidermal growth factor receptor
  2. Huang, Yongjian; Ognjenovic,Jana; Karandur, Deepti; Miller, Kate; Merk,Alan; Subramaniam, Sriram; Kuriyan, John
  3. Elife. 2021, Nov 30; 10
  1. 13.   nightshift: A Python program for plotting simulated NMR spectra from assigned chemical shifts from the Biological Magnetic Resonance Data Bank
  2. Fucci,Ian; Byrd,Robert
  3. Protein Science. 2021, Sep 13;
  1. 14.   Remodelin Is a Cryptic Assay Interference Chemotype That Does Not Inhibit NAT10-Dependent Cytidine Acetylation
  2. Shrimp,Jonathan; Jing,Yihang; Thalalla Gamage,Supuni; Nelson, Kathryn M.; Han, Joseph; Bryson, Keri M.; Montgomery,David; Thomas, Justin M.; Nance,Kellie; Sharma, Sunny; Fox,Stephen; Andresson,Thorkell; Sinclair,Wilson; Wu, Hong; Allali-Hassani, Abdellah; Senisterra, Guillermo; Vedadi, Masoud; Lafontaine, Denis; Dahlin, Jayme L.; Marmorstein, Ronen; Walters, Michael A.; Meier,Jordan
  3. ACS MEDICINAL CHEMISTRY LETTERS. 2021, Jun 10; 12(6): 887-892.
  1. 15.   Pattern of failure in prostate cancer previously treated with radical prostatectomy and post-operative radiotherapy: a secondary analysis of two prospective studies using novel molecular imaging techniques
  2. Rowe, Lindsay S.; Harmon,Stephanie; Horn, Adam; Shankavaram, Uma; Roy, Soumyajit; Ning, Holly; Lindenberg, Liza; Mena, Esther; Citrin, Deborah E.; Choyke, Peter; Turkbey, Baris
  3. Radiation Oncology. 2021, Feb 10; 16(1):
  1. 16.   SAVI, in silico generation of billions of easily synthesizable compounds through expert-system type rules
  2. Patel,Hitesh; Ihlenfeldt, Wolf-Dietrich; Judson, Philip N; Moroz, Yurii S; Pevzner, Yuri; Peach,Megan; Delannee,Victorien; Tarasova,Nadya; Nicklaus,Marc
  3. Scientific data. 2020, NOV 11; 7(1): 384.
  1. 17.   Heterogeneous adaptation of cysteine reactivity to a covalent oncometabolite
  2. Perez,Minervo; Bak, Daniel W.; Bergholtz, Sarah E.; Crooks, Daniel R.; Arimilli, Bhargav Srinivas; Yang, Youfeng; Weerapana, Eranthie; Linehan, W. Marston; Meier,Jordan
  3. JOURNAL OF BIOLOGICAL CHEMISTRY. 2020, SEP 25; 295(39): 13410-13418.
  1. 18.   18F-DCFPyL PET/CT Imaging in Patients with Biochemical Recurrence Prostate Cancer after Primary Local Therapy
  2. Mena, Esther; Lindenberg, Maria Liza; Turkbey, Ismael Baris; Shih, Joanna H; Harmon,Stephanie; Lim, Ilhan; Lin, Frank I; Adler,Stephen; Eclarinal, Philip; McKinney, Yolanda; Citrin, Deborah; Dahut, William; Wood, Bradford; Krishnasamy, Venkatesh; Chang, Richard; Levy, Elliot; Merino, Maria; Pinto, Peter; Eary, Janet F; Choyke, Peter L
  3. Journal of nuclear medicine : official publication, Society of Nuclear Medicine. 2020, JUN 1; 61(6): 881-889.
  1. 19.   Deleterious effects of carbon-carbon dipolar coupling on RNA NMR dynamics
  2. Nam, Hyeyeon; Becette, Owen; LeBlanc, Regan M; Oh, Daniel; Case, David A; Dayie, Theodore K
  3. Journal of biomolecular NMR. 2020, May 03;
  1. 20.   Protein Engineering in the Ubiquitin System: Tools for Discovery and Beyond
  2. Zhao, Bo; Tsai,Yien Che; Jin, Bo; Wang, Bufan; Wang, Yiyang; Zhou, Han; Carpenter, Tomaya; Weissman,Allan; Yin, Jun
  3. Pharmacological reviews. 2020, Apr; 72(2): 380-413.
  1. 21.   A Systems Chemoproteomic Analysis of Acyl-CoA/Protein Interaction Networks
  2. Levy, Michaella J; Montgomery, David C; Sardiu, Mihaela E; Montano,Jose; Bergholtz, Sarah E; Nance,Kellie; Thorpe,Abbey; Fox,Stephen; Lin, Qishan; Andresson,Thorkell; Florens, Laurence; Washburn, Michael P; Meier,Jordan
  3. Cell chemical biology. 2020, MAR 19; 27(3): 322-+.
  1. 22.   Structure of E3 ligase E6AP with a proteasome-binding site provided by substrate receptor hRpn10
  2. Buel,Gwen; Chen,Xiang; Chari,Raj; O'Neill, Maura J; Ebelle, Danielle L; Jenkins, Conor; Sridharan, Vinidhra; Tarasov,Sergey; Tarasova,Nadya; Andresson,Thorkell; Walters,Kylie
  3. Nature communications. 2020, Mar 10; 11(1): 1291.
  1. 23.   Conformational Switch to a beta-Turn in a Staphylococcal Quorum Sensing Signal Peptide Causes a Dramatic Increase in Potency
  2. Vasquez, Joseph K.; West, Korbin H. J.; Yang, Tian; Polaske, Thomas J.; Cornilescu,Gabriel; Tonelli, Marco; Blackwell, Helen E.
  3. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY. 2020, JAN 15; 142(2): 750-761.
  1. 24.   Structural Fluidity of the Human Immunodeficiency Virus Rev Response Element
  2. Sherpa,Chringma; Le Grice,Stuart
  3. Viruses. 2020, Jan; 12(1):
  1. 25.   Sizing up the Next Generation of Nanomedicines
  2. Clogston,Jeffrey; Hackley, Vincent A; Prina-Mello, Adriele; Puri, Sanyogitta; Sonzini, Silvia; Soo, Patrick Lim
  3. Pharmaceutical research. 2020, JAN; 37(1): 6.
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