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  1. 1.   PDB Ligand Conformational Energies Calculated Quantum-Mechanically
  2. Sitzmann, M.; Weidlich, I. E.; Filippov, I. V.; Liao, C.; Peach, M. L.; Ihlenfeldt, W. D.; Karki, R. G.; Borodina, Y. V.; Cachau, R. E.; Nicklaus, M. C.
  3. Journal of Chemical Information and Modeling. 2012, Mar; 52(3): 739-756.
  1. 2.   Structural determinants of tobacco vein mottling virus protease substrate specificity
  2. Sun, P.; Austin, B. P.; Tozser, J.; Waugh, D. S.
  3. Protein Science. 2010, Nov; 19(11): 2240-2251.
  1. 3.   Structural insight into the evolutionary and pharmacologic homology of glutamate carboxypeptidases II and III
  2. Hlouchova, K.; Barinka, C.; Konvalinka, J.; Lubkowski, J.
  3. Febs Journal. 2009 276(16): 4448-4462.
  1. 4.   Structural insight into the pharmacophore pocket of human glutamate carboxypeptidase II
  2. Barinka, C.; Rovenska, M.; Mlcochova, P.; Hlouchova, K.; Plechanovova, A.; Majer, P.; Tsukamoto, T.; Slusher, B. S.; Konvalinka, J.; Lubkowski, J.
  3. Journal of Medicinal Chemistry. 2007, Jul; 50(14): 3267-3273.
  1. 5.   EMatch: an efficient method for aligning atomic resolution subunits into intermediate-resolution cryo-EM maps of large macromolecular assemblies
  2. Dror, O.; Lasker, K.; Nussinov, R.; Wolfson, H.
  3. Acta Crystallographica Section D-Biological Crystallography. 2007, Jan; 63: 42-49.
  1. 6.   EMatch: Discovery of high resolution structural homologues of protein domains in intermediate resolution cryo-EM maps
  2. Lasker, K.; Dror, O.; Shatsky, M.; Nussinov, R.; Wolfson, H. J.
  3. Ieee-Acm Transactions on Computational Biology and Bioinformatics. 2007, Jan-Mar; 4(1): 28-39.
  1. 7.   Molecular replacement with pseudosymmetry and model dissimilarity: a case study
  2. Jaskolski, M.; Li, M.; Laco, G.; Gustchina, A.; Wlodawer, A.
  3. Acta Crystallographica Section D-Biological Crystallography. 2006, FEB; 62(Part 2): 208-215.
  1. 8.   Molecular architecture and ligand recognition determinants for T4 RNA ligase
  2. El Omari, K.; Ren, J.; Bird, L. E.; Bona, M. K.; Klarmann, G.; Legrice, S. F. J.; Stammers, D. K.
  3. Journal of Biological Chemistry. 2006, JAN 20; 281(3): 1573-1579.
  1. 9.   High-resolution crystallography and drug design
  2. Cachau, R. E.; Podjarny, A. D.
  3. Journal of Molecular Recognition. 2005, MAY-JUN; 18(3): 196-202.
  1. 10.   Identification of small molecule inhibitors of anthrax lethal factor
  2. Panchal, R. G.; Hermone, A. R.; Nguyen, T. L.; Wong, T. Y.; Schwarzenbacher, R.; Schmidt, J.; Lane, D.; McGrath, C.; Turk, B. E.; Burnett, J.; Aman, M. J.; Little, S.; Sausville, E. A.; Zaharevitz, D. W.; Cantley, L. C.; Liddington, R. C.; Gussio, R.; Bavari, S.
  3. Nature Structural & Molecular Biology. 2004 11(1): 67-72.
  1. 11.   Structure of the scorpion toxin BmBKTtx1 solved from single wavelength anomalous scattering of sulfur
  2. Szyk, A.; Lu, W. Y.; Xu, C. Q.; Lubkowski, J.
  3. Journal of Structural Biology. 2004 145(3): 289-294.
  1. 12.   Ultrahigh resolution drug design I: Details of interactions in human aldose reductase-inhibitor complex at 0.66 angstrom
  2. Howard, E. I.; Sanishvili, R.; Cachau, R. E.; Mitschler, A.; Chevrier, B.; Barth, P.; Lamour, V.; Van Zandt, M.; Sibley, E.; Bon, C.; Moras, D.; Schneider, T. R.; Joachimiak, A.; Podjarny, A.
  3. Proteins-Structure Function and Bioinformatics. 2004 55(4): 792-804.
  1. 13.   The crystal structure of annexin Gh1 from Gossypium hirsutum reveals an unusual S-3 cluster - Implications for cellulose synthase complex formation and oxidative stress response
  2. Hofmann, A.; Delmer, D. P.; Wlodawer, A.
  3. European Journal of Biochemistry. 2003 270(12): 2557-2564.
  1. 14.   Structure of cyclized green fluorescent protein
  2. Hofmann, A.; Iwai, H.; Hess, S.; Pluckthun, A.; Wlodawer, A.
  3. Acta Crystallographica Section D-Biological Crystallography. 2002 58(Part 9): 1400-1406.
  1. 15.   Crystal structures of the semireduced and inhibitor-bound forms of cyclic nucleotide phosphodiesterase from Arabidopsis thaliana
  2. Hofmann, A.; Grella, M.; Botos, I.; Filipowicz, W.; Wlodawer, A.
  3. Journal of Biological Chemistry. 2002 277(2): 1419-1425.
  1. 16.   A conserved glutamate residue exhibits multifunctional catalytic roles in D-fructose-1,6-bisphosphate aldolases
  2. Maurady, A.; Zdanov, A.; de Moissac, D.; Beaudry, D.; Sygusch, J.
  3. Journal of Biological Chemistry. 2002 277(11): 9474-9483.
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