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  1. 1.   The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models
  2. Shi, L. M.; Campbell, G.; Jones, W. D.; Campagne, F.; Wen, Z. N.; Walker, S. J.; Su, Z. Q.; Chu, T. M.; Goodsaid, F. M.; Pusztai, L.; Shaughnessy, J. D.; Oberthuer, A.; Thomas, R. S.; Paules, R. S.; Fielden, M.; Barlogie, B.; Chen, W. J.; Du, P.; Fischer, M.; Furlanello, C.; Gallas, B. D.; Ge, X. J.; Megherbi, D. B.; Symmans, W. F.; Wang, M. D.; Zhang, J.; Bitter, H.; Brors, B.; Bushel, P. R.; Bylesjo, M.; Chen, M. J.; Cheng, J.; Chou, J.; Davison, T. S.; Delorenzi, M.; Deng, Y. P.; Devanarayan, V.; Dix, D. J.; Dopazo, J.; Dorff, K. C.; Elloumi, F.; Fan, J. Q.; Fan, S. C.; Fan, X. H.; Fang, H.; Gonzaludo, N.; Hess, K. R.; Hong, H. X.; Huan, J.; Irizarry, R. A.; Judson, R.; Juraeva, D.; Lababidi, S.; Lambert, C. G.; Li, L.; Li, Y. N.; Li, Z.; Lin, S. M.; Liu, G. Z.; Lobenhofer, E. K.; Luo, J.; Luo, W.; McCall, M. N.; Nikolsky, Y.; Pennello, G. A.; Perkins, R. G.; Philip, R.; Popovici, V.; Price, N. D.; Qian, F.; Scherer, A.; Shi, T. L.; Shi, W. W.; Sung, J.; Thierry-Mieg, D.; Thierry-Mieg, J.; Thodima, V.; Trygg, J.; Vishnuvajjala, L.; Wang, S. J.; Wu, J. P.; Wu, Y. C.; Xie, Q. A.; Yousef, W. A.; Zhang, L. A.; Zhang, X. G.; Zhong, S.; Zhou, Y. M.; Zhu, S.; Arasappan, D.; Bao, W. J.; Lucas, A. B.; Berthold, F.; Brennan, R. J.; Buness, A.; Catalano, J. G.; Chang, C.; Chen, R.; Cheng, Y. Y.; Cui, J. A.; Czika, W.; Demichelis, F.; Deng, X. T.; Dosymbekov, D.; Eils, R.; Feng, Y.; Fostel, J.; Fulmer-Smentek, S.; Fuscoe, J. C.; Gatto, L.; Ge, W. G.; Goldstein, D. R.; Guo, L.; Halbert, D. N.; Han, J.; Harris, S. C.; Hatzis, C.; Herman, D.; Huang, J. P.; Jensen, R. V.; Jiang, R.; Johnson, C. D.; Jurman, G.; Kahlert, Y.; Khuder, S. A.; Kohl, M.; Li, J. Y.; Li, M. L.; Li, Q. Z.; Li, S.; Li, Z. G.; Liu, J.; Liu, Y.; Liu, Z. C.; Meng, L.; Madera, M.; Martinez-Murillo, F.; Medina, I.; Meehan, J.; Miclaus, K.; Moffitt, R. A.; Montaner, D.; Mukherjee, P.; Mulligan, G. J.; Neville, P.; Nikolskaya, T.; Ning, B. T.; Page, G. P.; Parker, J.; Parry, R. M.; Peng, X. J.; Peterson, R. L.; Phan, J. H.; Quanz, B.; Ren, Y.; Riccadonna, S.; Roter, A. H.; Samuelson, F. W.; Schumacher, M. M.; Shambaugh, J. D.; Shi, Q. A.; Shippy, R.; Si, S. Z.; Smalter, A.; Sotiriou, C.; Soukup, M.; Staedtler, F.; Steiner, G.; Stokes, T. H.; Sun, Q. L.; Tan, P. Y.; Tang, R.; Tezak, Z.; Thorn, B.; Tsyganova, M.; Turpaz, Y.; Vega, S. C.; Visintainer, R.; von Frese, J.; Wang, C.; Wang, E.; Wang, J. W.; Wang, W.; Westermann, F.; Willey, J. C.; Woods, M.; Wu, S. J.; Xiao, N. Q.; Xu, J.; Xu, L.; Yang, L.; Zeng, X. A.; Zhang, J. L.; Zhang, L.; Zhang, M.; Zhao, C.; Puri, R. K.; Scherf, U.; Tong, W. D.; Wolfinger, R. D.; Consortium, M.
  3. Pharmacogenomics Journal. 2010, Oct; S5-S16.
  1. 2.   Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
  2. Huang, D. W.; Sherman, B. T.; Lempicki, R. A.
  3. Nucleic Acids Research. 2009 37(1): 1-13.
  1. 3.   Long-term Epigenetic Therapy with Oral Zebularine Has Minimal Side Effects and Prevents Intestinal Tumors in Mice
  2. Yoo, C. B.; Chuang, J. C.; Byun, H. M.; Egger, G.; Yang, A. S.; Dubeau, L.; Long, T.; Laird, P. W.; Marquez, V. E.; Jones, P. A.
  3. Cancer Prevention Research. 2008 1(4): 233-240.
  1. 4.   Detailed DNA methylation profiles of the E-cadherin promoter in the NCI-60 cancer cells
  2. Reinhold, W. C.; Reimers, M. A.; Maunakea, A. K.; Kim, S.; Lababidi, S.; Scherf, U.; Shankavaram, U. T.; Ziegler, M. S.; Stewart, C.; Kouros-Mehr, H.; Cui, H. M.; Dolginow, D.; Scudiero, D. A.; Pommier, Y. G.; Munroe, D. J.; Feinberg, A. P.; Weinstein, J. N.
  3. Molecular Cancer Therapeutics. 2007, Feb; 6(2): 391-403.
  1. 5.   AbMiner: A bioinformatic resource on available monoclonal antibodies and corresponding gene identifiers for genomic, proteomic, and immunologic studies
  2. Major, S. M.; Nishizuka, S.; Morita, D.; Rowl, R.; Sunshine, M.; Shankavaram, U.; Washburn, F.; Asin, D.; Kouros-Mehr, H.; Kane, D.; Weinstein, J. N.
  3. Bmc Bioinformatics. 2006, Apr; 7
  1. 6.   Immunogenetic risk and protective factors for the idiopathic inflammatory myopathies - Distinct HLA-A -B, -Cw,-DRB1, and-DQA1 allelic profiles distinguish European American patients with different myositis autoantibodies
  2. O'Hanlon, T. P.; Carrick, D. M.; Targoff, I. N.; Arnett, F. C.; Reveille, J. D.; Carrington, M.; Gao, A. J.; Oddis, C. V.; Morel, P. A.; Malley, J. D.; Malley, K.; Shamim, E. A.; Rider, L. G.; Chanock, S. J.; Foster, C. B.; Bunch, T.; Blackshear, P. J.; Plotz, P. H.; Love, L. A.; Miller, F. W.
  3. Medicine. 2006, Mar; 85(2): 111-127.
  1. 7.   Immunogenetic risk and protective factors for the idiopathic inflammatory myopathies - Distinct HLA-A, -B, -Cw,-DRB1 and -DQA1 allelic profiles and motifs define clinicopothologic groups in Caucasians
  2. O'Hanlon, T. P.; Carrick, D. M.; Arnett, F. C.; Reveille, J. D.; Carrington, M.; Gao, X. J.; Oddis, C. V.; Morel, P. A.; Malley, J. D.; Malley, K.; Dreyfuss, J.; Shamim, E. A.; Rider, L. G.; Chanock, S. J.; Foster, C. B.; Bunch, T.; Plotz, P. H.; Love, L. A.; Miller, F. W.
  3. Medicine. 2005, NOV; 84(6): 338-349.
  1. 8.   Diagnostic markers that distinguish colon and ovarian adenocarcinomas: identification by genomic, proteomic, and tissue array profiling
  2. Nishizuka, S.; Chen, S. T.; Gwadry, F. G.; Alexander, J.; Major, S. M.; Scherf, U.; Reinhold, W. C.; Waltham, M.; Charboneau, L.; Young, L.; Bussey, K. J.; Kim, S. Y.; Lababidi, S.; Lee, J. K.; Pittaluga, S.; Scudiero, D. A.; Sausville, E. A.; Munson, P. J.; Petricoin, E. F.; Liotta, L. A.; Hewitt, S. M.; Raffeld, M.; Weinstein, J. N.
  3. Cancer Research. 2003 63(17): 5243-5250.
  1. 9.   Mining the National Cancer Institute's tumor-screening database: Identification of compounds with similar cellular activities
  2. Rabow, A. A.; Shoemaker, R. H.; Sausville, E. A.; Covell, D. G.
  3. Journal of Medicinal Chemistry. 2002 45(4): 818-840.
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