Skip NavigationSkip to Content

NCI at Frederick Scientific Publications Advanced Search

Search

  1. NCI-F Publications

  2. Return to Quick Search
Search
  2. Year Published:

Your search returned 119 results.
User Information
Export Records
  1. 1.   HPV oncogenes expressed from only one of multiple integrated HPV DNA copies drive clonal cell expansion in cervical cancer
  2. Yu,Lulu; Majerciak,Vladimir; Lobanov, Alexei; Mirza, Sameer; Band, Vimla; Liu, Haibin; Cam, Maggie; Hughes,Stephen; Lowy, Douglas R; Zheng, Zhi-Ming
  3. mBio. 2024, Apr 16; e0072924.
  1. 2.   Insights into the mechanisms and structure of breakage-fusion-bridge cycles in cervical cancer using long-read sequencing
  2. Rodriguez, Isabel; Rossi, Nicole M; Keskus, Ayse G; Xie, Yi; Ahmad, Tanveer; Bryant, Asher; Lou,Hong; Paredes, Jesica Godinez; Milano, Rose; Rao, Nina; Tulsyan, Sonam; Boland, Joseph F; Luo,Wen; Liu,Jia; O'Hanlon, Tim; Bess, Jazmyn; Mukhina, Vera; Gaykalova, Daria; Yuki, Yuko; Malik, Laksh; Billingsley, Kimberley J; Blauwendraat, Cornelis; Carrington, Mary; Yeager,Meredith; Mirabello, Lisa; Kolmogorov, Mikhail; Dean, Michael
  3. American Journal of Human Genetics. 2024, Jan 25;
  1. 3.   Integration and viral oncogene expression of human papillomavirus type 16 in oropharyngeal squamous cell carcinoma and gastric cancer
  2. Xu, Qiang; Dong, Haoru; Wang, Zhiyu; Zhang, Pei; Albers, Andreas E; Kaufmann, Andreas M; Zheng,Zhi-Ming; Qian, Xu
  3. Journal of Medical Virology. 2023, May; 95(5): e28761.
  1. 4.   Progressive transformation of the HIV-1 reservoir cell profile over two decades of antiviral therapy
  2. Lian, Xiaodong; Seiger, Kyra W; Parsons, Elizabeth M; Gao, Ce; Sun, Weiwei; Gladkov, Gregory T; Roseto, Isabelle C; Einkauf, Kevin B; Osborn, Matthew R; Chevalier, Joshua M; Jiang, Chenyang; Blackmer, Jane; Carrington,Mary; Rosenberg, Eric S; Lederman, Michael M; McMahon, Deborah K; Bosch, Ronald J; Jacobson, Jeffrey M; Gandhi, Rajesh T; Peluso, Michael J; Chun, Tae-Wook; Deeks, Steven G; Yu, Xu G; Lichterfeld, Mathias
  3. Cell Host & Microbe. 2022, Dec 28; 31
  1. 5.   Antisense transcription from lentiviral gene targeting linked to an integrated stress response in colorectal cancer cells
  2. Ha, Taekyu; DiPrima, Michael; Koparde,Vishal; Jailwala,Parthav; Ohnuki, Hidetaka; Feng, Jing-Xin; Palangat, Murali; Larson, Daniel; Tosato, Giovanna
  3. Molecular Therapy. Nucleic Acids. 2022, Jun 14; 28: 877-891.
  1. 6.   Deep Sequencing Analysis of Individual HIV-1 Proviruses Reveals Frequent Asymmetric Long Terminal Repeats
  2. Joseph, Kevin W; Halvas, Elias K; Brandt, Leah D; Patro,Sean; Rausch,Jason; Chopra, Abha; Mallal, Simon; Kearney,Mary; Coffin, John M; Mellors, John W
  3. Journal of Virology. 2022, Jun 08; e0012222.
  1. 7.   Intranuclear Positions of HIV-1 Proviruses Are Dynamic and Do Not Correlate with Transcriptional Activity
  2. Burdick, Ryan C; Deleage, Claire; Duchon, Alice; Estes, Jacob D; Hu, Wei-Shau; Pathak, Vinay K
  3. mBio. 2022, Feb 22; 13(1):
  1. 8.   INSTIs and NNRTIs Potently Inhibit HIV-1 Polypurine Tract Mutants in a Single Round Infection Assay
  2. Smith, Steven J; Ferris,Andrea; Zhao, Xuezhi; Pauly,Gary; Schneider,Joel; Burke,Terrence; Hughes,Stephen
  3. Viruses. 2021, Dec 14; 13(12):
  1. 9.   Integration of adeno-associated virus (AAV) into the genomes of most Thai and Mongolian liver cancer patients does not induce oncogenesis
  2. Schaffer, Alejandro A.; Dominguez, Dana A.; Chapman, Lesley M.; Gertz, E. Michael; Budhu, Anuradha; Forgues, Marshonna; Chaisaingmongkol, Jittiporn; Rabibhadana, Siritida; Pupacdi, Benjarath; Wu,Xiaolin; Bayarsaikhan, Enkhjargal; Harris, Curtis C.; Ruchirawat, Mathuros; Ruppin, Eytan; Wang, Xin Wei
  3. BMC GENOMICS. 2021, Nov 11; 22(1):
  1. 10.   Insertional activation of STAT3 and LCK by HIV-1 proviruses in T cell lymphomas
  2. Mellors, John W.; Guo, Shuang; Naqvi, Asma; Brandt, Leah D.; Su, Ling; Sun, Zhonghe; Joseph, Kevin W.; Demirov, Dimiter; Halvas, Elias K.; Butcher, Donna; Scott, Beth; Hamilton, Aaron; Heil, Marintha; Karim, Baktiar; Wu, Xiaolin; Hughes, Stephen H.
  3. Science Advances. 2021, Oct 13; 7(42):
  1. 11.   Tracking HIV-1-Infected Cell Clones Using Integration Site-Specific qPCR
  2. Brandt, Leah D; Guo,Amber; Joseph, Kevin W; Jacobs, Jana L; Naqvi, Asma; Coffin, John M; Kearney,Mary; Halvas, Elias K; Wu,Xiaolin; Hughes,Stephen; Mellors, John W
  3. Viruses. 2021, Jul; 13(7):
  1. 12.   The DNA binding domain of the Vibrio vulnificus SmcR transcription factor is flexible and binds diverse DNA sequences
  2. Newman, Jane D.; Russell, Meghan M.; Fan,Lixin; Wang,Yun-Xing; Gonzalez-Gutierrez, Giovanni; van Kessel, Julia C.
  3. Nucleic acids research. 2021, Jun 4; 49(10): 5967-5984.
  1. 13.   Reverse-transcribed SARS-CoV-2 RNA can integrate into the genome of cultured human cells and can be expressed in patient-derived tissues
  2. Zhang, Liguo; Richards, Alexsia; Barrasa, M Inmaculada; Hughes,Stephen; Young, Richard A; Jaenisch, Rudolf
  3. Proceedings of the National Academy of Sciences of the United States of America. 2021, May 25; 118(21):
  1. 14.   Early Emergence and Long-Term Persistence of HIV-Infected T-Cell Clones in Children
  2. Bale, Michael J.; Katusiime, Mary Grace; Wells, Daria; Wu, Xiaolin; Spindler, Jonathan; Halvas, Elias K.; Cyktor, Joshua C.; Wiegand, Ann; Shao, Wei; Cotton, Mark F.; Hughes, Stephen H.; Mellors, John W.; Coffin, John M.; Van Zyl, Gert U.; Kearney, Mary F.
  3. mBio. 2021, Apr 8 ; 12(2):
  1. 15.   Integrase Strand Transfer Inhibitors Are Effective Anti-HIV Drugs
  2. Smith, Steven J.; Zhao,Xue Zhi; Passos, Dario Oliveira; Lyumkis, Dmitry; Burke,Terrence; Hughes,Stephen
  3. Viruses (Basel). 2021, Jan 29; 13(2):
  1. 16.   Characterizing the Latent HIV-1 Reservoir in Patients with Viremia Suppressed on cART: Progress, Challenges, and Opportunities
  2. Rausch,Jason; Le Grice,Stuart
  3. Current HIV research. 2020, Dec 30; 18(2): 99-113.
  1. 17.   Potential for Virus Endogenization in Humans through Testicular Germ Cell Infection: the Case of HIV
  2. Mahe, Dominique; Matusali, Giulia; Deleage,Claire; Alvarenga, Raquel L. L. S.; Satie, Anne-Pascale; Pagliuzza, Amelie; Mathieu, Romain; Lavoue, Sylvain; Jegou, Bernard; de Franca, Luiz R.; Chomont, Nicolas; Houzet, Laurent; Rolland, Antoine D.; Dejucq-Rainsford, Nathalie
  3. JOURNAL OF VIROLOGY. 2020, Dec; 94(24):
  1. 18.   Using whole-exome sequencing and protein interaction networks to prioritize candidate genes for germline cutaneous melanoma susceptibility
  2. Yepes, Sally; Tucker, Margaret A.; Koka, Hela; Xiao, Yanzi; Jones,Kristine; Vogt,Aurelie; Burdette, Laurie; Luo,Wen; Zhu,Bin; Hutchinson,Amy; Yeager,Meredith; Hicks,Belynda; Freedman, Neal D.; Chanock, Stephen J.; Goldstein, Alisa M.; Yang, Xiaohong R.
  3. SCIENTIFIC REPORTS. 2020, OCT 14; 10(1):
  1. 19.   The D2 and D3 sublineages of human papillomavirus 16-positive cervical cancer in Guatemala differ in integration rate and age of diagnosis
  2. Lou,Hong; Boland,Joseph; Torres-Gonzalez, Edmundo; Albanez, Anaseidy; Zhou,Weiyin; Steinberg,Mia; Diaw, Lena; Mitchell, Jason; Roberson, David; Cullen,Michael; Garland,Lisa; Bass,Sara; Burk, Robert D; Yeager,Meredith; Wentzensen, Nicolas; Schiffman, Mark; Alvirez Freites, Enrique; Gharzouzi, Eduardo; Mirabello, Lisa; Dean, Michael
  3. Cancer research. 2020, SEP 15; 80(18): 3803-3809.
  1. 20.   Distinct viral reservoirs in individuals with spontaneous control of HIV-1
  2. Jiang, Chenyang; Lian, Xiaodong; Gao, Ce; Sun, Xiaoming; Einkauf, Kevin B; Chevalier, Joshua M; Chen, Samantha M Y; Hua, Stephane; Rhee, Ben; Chang, Kaylee; Blackmer, Jane E; Osborn, Matthew; Peluso, Michael J; Hoh, Rebecca; Somsouk, Ma; Milush, Jeffrey; Bertagnolli, Lynn N; Sweet, Sarah E; Varriale, Joseph A; Burbelo, Peter D; Chun, Tae-Wook; Laird, Gregory M; Serrao, Erik; Engelman, Alan N; Carrington,Mary; Siliciano, Robert F; Siliciano, Janet M; Deeks, Steven G; Walker, Bruce D; Lichterfeld, Mathias; Yu, Xu G
  3. Nature. 2020, Aug 26;
  1. 21.   HIV-1 uncoats in the nucleus near sites of integration
  2. Burdick,Ryan; Li,Chenglei; Munshi,Mohsin; Rawson,Jonathan; Nagashima,Kunio; Hu,Wei-Shau; Pathak,Vinay
  3. Proceedings of the National Academy of Sciences of the United States of America. 2020, MAR 10; 117(10): 5486-5493.
  1. 22.   An analytical pipeline for identifying and mapping the integration sites of HIV and other retroviruses
  2. Wells,Daria; Guo,Amber; Shao,Wei; Bale,Michael; Coffin, John M; Hughes,Stephen; Wu,Xiaolin
  3. BMC genomics. 2020, Mar 09; 21(1): 216.
  1. 23.   Lentiviral gene therapy for X-linked chronic granulomatous disease
  2. Kohn, Donald B; Booth, Claire; Kang, Elizabeth M; Pai, Sung-Yun; Shaw, Kit L; Santilli, Giorgia; Armant, Myriam; Buckland, Karen F; Choi, Uimook; De Ravin, Suk See; Dorsey, Morna J; Kuo, Caroline Y; Leon-Rico, Diego; Rivat, Christine; Izotova, Natalia; Gilmour, Kimberly; Snell, Katie; Dip, Jinhua Xu-Bayford; Darwish, Jinan; Morris, Emma C; Terrazas, Dayna; Wang, Leo D; Bauser, Christopher A; Paprotka, Tobias; Kuhns,Doug; Gregg, John; Raymond, Hayley E; Everett, John K; Honnet, Geraldine; Biasco, Luca; Newburger, Peter E; Bushman, Frederic D; Grez, Manuel; Gaspar, H Bobby; Williams, David A; Malech, Harry L; Galy, Anne; Thrasher, Adrian J
  3. Nature medicine. 2020, Jan 27; pii: 10.1038/s41591-019-0735-5.
  1. 24.   CPSF6-Dependent Targeting of Speckle-Associated Domains Distinguishes Primate from Nonprimate Lentiviral Integration
  2. Li, Wen; Singh, Parmit K; Sowd, Gregory A; Bedwell, Gregory J; Jang, Sooin; Achuthan, Vasudevan; Oleru, Amarachi V; Wong, Doris; Fadel, Hind J; Lee,Kyeongeun; KewalRamani,Vineet; Poeschla, Eric M; Herschhorn, Alon; Engelman, Alan N
  3. mBio. 2020, SEP-OCT; 11(5): pii: e02254-20.
  1. 25.   Combined HIV-1 sequence and integration site analysis informs viral dynamics and allows reconstruction of replicating viral ancestors
  2. Patro,Sean; Brandt, Leah D; Bale,Michael; Halvas, Elias K; Joseph, Kevin W; Shao,Wei; Wu,Xiaolin; Guo,Amber; Murrell, Ben; Wiegand,Ann; Spindler,Jon; Raley, Castle; Hautman, Christopher; Sobolewski, Michele; Fennessey,Christine; Hu,Wei-Shau; Luke,Brian; Hasson,Jenna; Niyongabo,Aurelie; Capoferri,Adam; Keele,Brandon; Milush, Jeff; Hoh, Rebecca; Deeks, Steven G; Maldarelli,Frank; Hughes,Stephen; Coffin, John M; Rausch,Jason; Mellors, John W; Kearney,Mary
  3. Proceedings of the National Academy of Sciences of the United States of America. 2019, Dec 17; 116(51): 25891-25899.
NCI at Frederick

You are leaving a government website.

This external link provides additional information that is consistent with the intended purpose of this site. The government cannot attest to the accuracy of a non-federal site.

Linking to a non-federal site does not constitute an endorsement by this institution or any of its employees of the sponsors or the information and products presented on the site. You will be subject to the destination site's privacy policy when you follow the link.

ContinueCancel