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  1. 1.   Synthetic, Structural, and Anticancer Activity Evaluation Studies on Novel Pyrazolylnucleosides
  2. Yadav, Yogesh; Sharma, Deepti; Kaushik, Kumar; Kumar, Vineet; Jha, Amitabh; Prasad, Ashok K; Len, Christophe; Malhotra, Sanjay V; Wengel, Jesper; Parmar, Virinder S
  3. Molecules (Basel, Switzerland). 2019, Nov; 24(21): pii: E3922.
  1. 2.   Chemoinformatics at the CADD Group of the National Cancer Institute
  2. Peach,Megan; Nicklaus,Marc
  3. Applied Chemoinformatics: Achievements and Future Opportunities. 2018; 385-393.
  1. 3.   Synthesis of Conformationally North-Locked Pyrimidine Nucleosides Built on an Oxabicyclo[3.1.0]hexane Scaffold
  2. Ludek, O. R.; Marquez, V. E.
  3. Journal of Organic Chemistry. 2012, Jan; 77(2): 815-824.
  1. 4.   Ionic Liquids: Neoteric Solvents for Nucleoside Chemistry
  2. Kumar, V.; Parmar, V. S.; Malhotra, S. V.
  3. Current Organic Synthesis. 2011, Dec; 8(6): 777-786.
  1. 5.   A Direct, Efficient Method for the Preparation of siRNAs Containing Ribo-like North Bicyclo[3.1.0]hexane Pseudosugars
  2. Terrazas, M.; Avino, A.; Siddiqui, M. A.; Marquez, V. E.; Eritja, R.
  3. Organic Letters. 2011, Jun; 13(11): 2888-2891.
  1. 6.   Understanding the effects of carbocyclic sugars constrained to north and south conformations on RNA nanodesign
  2. Kim, T.; Barchi, J. J.; Marquez, V. E.; Shapiro, B. A.
  3. Journal of Molecular Graphics & Modelling. 2011, Feb; 29(5): 624-634.
  1. 7.   Selective Modulation of DNA Polymerase Activity by Fixed-Conformation Nucleoside Analogues
  2. Eoff, R. L.; McGrath, C. E.; Maddukuri, L.; Salamanca-Pinzon, S. G.; Marquez, V. E.; Marnett, L. J.; Guengerich, F. P.; Egli, M.
  3. Angewandte Chemie-International Edition. 2010, Oct 4; 49(41): 7481-7485.
  1. 8.   Structural modifications of nucleosides in ionic liquids
  2. Kumar, V.; Parmar, V. S.; Malhotra, S. V.
  3. Biochimie. 2010, Sep; 92(9): 1260-1265.
  1. 9.   Design and Synthesis of Isonucleosides Constructed on a 2-Oxa-6-thiabicyclo[3.2.0]heptane Scaffold
  2. Yoshimura, Y.; Asami, K.; Imamichi, T.; Okuda, T.; Shiraki, K.; Takahata, H.
  3. Journal of Organic Chemistry. 2010, Jun; 75(12): 4161-4171.
  1. 10.   Application of Halide Molten Salts as Novel Reaction Media for O-Glycosidic Bond Formation
  2. Kumar, V.; Talisman, I. J.; Malhotra, S. V.
  3. European Journal of Organic Chemistry. 2010, Jun; (18): 3377-3381.
  1. 11.   Highly Efficient Method for C-5 Halogenation of Pyrimidine-Based Nucleosides in Ionic Liquids
  2. Kumar, V.; Yap, J.; Muroyama, A.; Malhotra, S. V.
  3. Synthesis-Stuttgart. 2009, Dec; (23): 3957-3962.
  1. 12.   The use of conformationally rigid nucleoside probes to study the role of sugar pucker and nucleobase orientation in the thrombin binding aptamer
  2. Saneyoshi, H.; Mazzini, S.; Avino, A.; Portella, G.; Gonzalez, C.; Orozco, M.; Marquez, V. E.; Eritja, R.
  3. Nucleic acids symposium series (2004). 2009 (53): 109-10.
  1. 13.   Conformationally rigid nucleoside probes help understand the role of sugar pucker and nucleobase orientation in the thrombin-binding aptamer
  2. Saneyoshi, H.; Mazzini, S.; Avino, A.; Portella, G.; Gonzalez, C.; Orozco, M.; Marquez, V. E.; Eritja, R.
  3. Nucleic Acids Research. 2009 37(17): 5589-5601.
  1. 14.   Synthesis of conformationally locked carbocyclic 1,3-diazepinone nucleosides as inhibitors of cytidine deaminase
  2. Ludek, O. R.; Schroeder, G. K.; Wolfenden, R.; Marquez, V. E.
  3. Nucleic acids symposium series (2004). 2008 (52): 659-60.
  1. 15.   What are the consequences of freezing the anomeric effect in nucleosides?
  2. Marquez, V. E.; Sun, G.; Siddiqui, M. A.; Lee, Y. C.; Barchi, J. J., Jr.; Filippov, I. V.; Landsman, N. A.; Kelley, J. A.
  3. Nucleic acids symposium series (2004). 2008 (52): 543-4.
  1. 16.   Comprehensive structural studies of 2',3"-difluorinated nucleosides: Comparison of theory, solution, and solid state
  2. Barchi, J. J.; Karki, R. G.; Nicklaus, M. C.; Siddiqui, M. A.; George, C.; Mikhailopulo, I. A.; Marquez, V. E.
  3. Journal of the American Chemical Society. 2008 130(28): 9048-9057.
  1. 17.   D-(+)-iso-methanocarbathymidine: A high-affinity substrate for herpes simplex virus 1 thymidine kinase
  2. Comin, M. J.; Vu, B. C.; Boyer, P. L.; Liao, C.; Hughes, S. H.; Marquez, V. E.
  3. Chemmedchem. 2008 3(7): 1129-1134.
  1. 18.   FeCl3-catalyzed Pechmann synthesis of coumarins in ionic liquids
  2. Kumar, V.; Tomar, S.; Patel, R.; Yousaf, A.; Parmar, V. S.; Malhotra, S. V.
  3. Synthetic Communications. 2008 38(15): 2646-2654.
  1. 19.   Synthesis of Conformationally Locked Versions of Puromycin Analogues
  2. Saneyoshi, H.; Michel, B. Y.; Choi, Y.; Strazewski, P.; Marquez, V. E.
  3. Journal of Organic Chemistry. 2008 73(23): 9435-9438.
  1. 20.   Biophysical studies of DNA modified with conformationally constrained nucleotides: comparison of 2 '-exo (north) and 3 '-exo (south) 'locked' templates
  2. Maderia, M.; Shenoy, S.; Van, Q. N.; Marquez, V. E.; Barchi, J. J.
  3. Nucleic Acids Research. 2007, Mar; 35(6): 1978-1991.
  1. 21.   The triphosphate of beta-D-4 '-C-ethynyl-2 ',3 '-dideoxycytidine is the preferred enantiomer substrate for HIV reverse transcriptase
  2. Siddiqui, M. A.; Marquez, V. E.
  3. Bioorganic & Medicinal Chemistry. 2007, Jan; 15(1): 283-287.
  1. 22.   The history of N-methanocarbathymidine: The investigation of a conformational concept leads to the discovery of a potent and selective nucleoside antiviral agent
  2. Marquez, V. E.; Hughes, S. H.; Sei, S.; Agbaria, R.
  3. Antiviral Research. 2006, Sep; 71(2-3): 268-275.
  1. 23.   Human P2Y(6) receptor: Molecular modeling leads to the rational design of a novel agonist based on a unique conformational preference
  2. Costanzi, S.; Joshi, B. V.; Maddileti, S.; Mamedova, L.; Gonzalez-Moa, M. J.; Marquez, V. E.; Harden, T. K.; Jacobson, K. A.
  3. Journal of Medicinal Chemistry. 2005, DEC 29; 48(26): 8108-8111.
  1. 24.   Understanding how the herpes thymidine kinase orchestrates optimal sugar and nucleobase conformations to accommodate its substrate at the active site: A chemical approach
  2. Marquez, V. E.; Choi, Y.; Comin, M. J.; Russ, P.; George, C.; Huleihel, M.; Ben-Kasus, T.; Agbaria, R.
  3. Journal of the American Chemical Society. 2005, NOV 2; 127(43): 15145-15150.
  1. 25.   Zebularine: A unique molecule for an epigenetically based strategy in cancer chemotherapy
  2. Marquez, V. E.; Kelley, J. A.; Agbaria, R.; Ben-Kasus, T.; Cheng, J. C.; Yoo, C. B.; Jones, P. A.
  3. Therapeutic Oligonucleotides: Transcriptional and Translational Strategies for Silencing Gene Expression. 2005; 1058 : 246-254.
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