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  1. 1.   Computational strategies for the automated design of RNA nanoscale structures from building blocks using NanoTiler
  2. Bindewald, E.; Grunewald, C.; Boyle, B.; O'Connor, M.; Shapiro, B. A.
  3. Journal of Molecular Graphics & Modelling. 2008 27(3): 299-308.
  1. 2.   Data mining of imperfect double-stranded RNA in 3 ' untranslated regions of eukaryotic mRNAs
  2. Le, S. Y.; Maizel, J. V.
  3. Biomolecular Engineering. 2007, Sep; 24(3): 351-359.
  1. 3.   EMatch: Discovery of high resolution structural homologues of protein domains in intermediate resolution cryo-EM maps
  2. Lasker, K.; Dror, O.; Shatsky, M.; Nussinov, R.; Wolfson, H. J.
  3. Ieee-Acm Transactions on Computational Biology and Bioinformatics. 2007, Jan-Mar; 4(1): 28-39.
  1. 4.   Specific interactions between HIV-1 nucleocapsid protein and the TAR element
  2. Kanevsky, I.; Chaminade, F.; Ficheux, D.; Moumen, A.; Gorelick, R.; Negroni, M.; Darlix, J. L.; Fosse, P.
  3. Journal of Molecular Biology. 2005, MAY 20; 348(5): 1059-1077.
  1. 5.   Periodicity, planarity, residual dipolar coupling, and structures
  2. Walsh, J. D.; Wang, Y. X.
  3. Journal of Magnetic Resonance. 2005, MAY; 174(1): 152-162.
  1. 6.   Discovery of protein substructures in EM maps
  2. Lasker, K.; Dror, O.; Nussinov, R.; Wolfson, H.
  3. Algorithms in bioinformatics. 2005; 3692 : 423-434.
  1. 7.   The parathyroid hormone mRNA 3 '-untranslated region AU-rich element is an unstructured functional element
  2. Kilav, R.; Bell, O.; Le, S. Y.; Silver, J.; Naveh-Many, T.
  3. Journal of Biological Chemistry. 2004 279(3): 2109-2116.
  1. 8.   RNA molecules with structure dependent functions are uniquely folded
  2. Le, S. Y.; Zhang, K. Z.; Maizel, J. V.
  3. Nucleic Acids Research. 2002 30(16): 3574-3582.
  1. 9.   A new algorithm for computing similarity between RNA structures
  2. Collins, G. D.; Le, S. Y.; Zhang, K. Z.
  3. Information Sciences. 2001 139(1-2): 59-77.
  1. 10.   A gender-specific mRNA encoding a cytotoxic ribonuclease contains a 3 ' UTR of unusual length and structure
  2. Chen, S. L.; Le, S. Y.; Newton, D. L.; Maizel, J. V.; Rybak, S. M.
  3. Nucleic Acids Research. 2000 28(12): 2375-2382.
  1. 11.   The human endogenous retrovirus K Rev response element coincides with a predicted RNA folding region
  2. Yang, J.; Bogerd, H.; Le, S. Y.; Cullen, B. R.
  3. Rna-a Publication of the Rna Society. 2000 6(11): 1551-1564.
  1. 12.   Phylogenetic evidence for the improved RNA higher-order structure in internal ribosome entry sequences of HCV and pestiviruses
  2. Le, S. Y.; Liu, W. M.; Maizel, J. V.
  3. Virus Genes. 1998 17(3): 279-295.
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