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  1. 1.   Natural Occurring Polymorphisms in HIV-1 Integrase and RNase H Regulate Viral Release and Autoprocessing
  2. Imamichi, Tomozumi; Bernbaum, John G.; Laverdure, Sylvain; Yang, Jun; Chen, Qian; Highbarger, Helene; Hao, Ming; Sui, Hongyan; Dewar, Robin; Chang, Weizhong; Lane, H. Clifford
  3. Journal of Virology . 2021, Dec; 95(23):
  1. 2.   A comprehensive analysis of polymorphic variants in steroid hormone and IGF-1 metabolism and risk of in situ breast cancer: results from the Breast and Prostate Cancer Cohort (BPC3) Consortium
  2. Barrdahl, Myrto; Canzian, Federico; Gaudet, Mia M; Gapstur, Susan M; Trichopoulou, Antonia; Tsilidis, Kostas; van Gils, Carla H; Borgquist, Signe; Weiderpass, Elisabete; Khaw, Kay-Tee; Giles, Graham G; Milne, Roger L; Le Marchand, Loic; Haiman, Christopher; Lindström, Sara; Kraft, Peter; Hunter, David J; Ziegler, Regina; Chanock, Stephen; Yang, Xiaohong R; Buring, Julie E; Lee, I-Min; Kaaks, Rudolf; Campa, Daniele
  3. International Journal of Cancer. 2018, Mar 15; 142(6): 1182-1188.
  1. 3.   Common genetic variation and risk of gallbladder cancer in India: a case-control genome-wide association study
  2. Mhatre, Sharayu; Wang, Zhaoming; Nagrani, Rajini; Badwe, Rajendra; Chiplunkar, Shubhada; Mittal, Balraj; Yadav, Saurabh; Zhang, Haoyu; Chung, Charles; Patil, Prachi; Chanock, Stephen; Dikshit, Rajesh; Chatterjee, Nilanjan; Rajaraman, Preetha
  3. LANCET ONCOLOGY. 2017, Apr; 18(4): 535-544.
  1. 4.   Comprehensive resequence analysis of a 123-kb region of chromosome 11q13 associated with prostate cancer
  2. Chung, C. C.; Boland, J.; Yeager, M.; Jacobs, K. B.; Zhang, X. J.; Deng, Z. M.; Matthews, C.; Berndt, S. I.; Chanock, S. J.
  3. Prostate. 2012, Apr; 72(5): 476-486.
  1. 5.   Polymorphisms in complement system genes and risk of non-Hodgkin lymphoma
  2. Bassig, B. A.; Zheng, T. Z.; Zhang, Y. W.; Berndt, S. I.; Holford, T. R.; Hosgood, H. D.; Hu, W.; Leaderer, B.; Yeager, M.; Menashe, I.; Boyle, P.; Xu, J.; Zou, K. Y.; Zhu, Y.; Chanock, S.; Rothman, N.; Lan, Q.
  3. Environmental and Molecular Mutagenesis. 2012, Mar; 53(2): 145-151.
  1. 6.   An allelic discrimination SNP assay for distinguishing the mitochondrial lineages of European wildcats and domestic cats
  2. McEwing, R.; Kitchener, A. C.; Holleley, C.; Kilshaw, K.; O'Donoghue, P.
  3. Conservation Genetics Resources. 2012, Mar; 4(1): 163-165.
  1. 7.   GWASdb: a database for human genetic variants identified by genome-wide association studies
  2. Li, M. L. J.; Wang, P. W.; Liu, X. R.; Lim, E. L.; Wang, Z. Y.; Yeager, M.; Wong, M. P.; Sham, P. C.; Chanock, S. J.; Wang, J. W.
  3. Nucleic Acids Research. 2012, Jan; 40(D1): D1047-D1054.
  1. 8.   Screening Low-Frequency SNPS From Genome-Wide Association Study Reveals a New Risk Allele for Progression to AIDS
  2. Le Clerc, S.; Coulonges, C.; Delaneau, O.; Van Manen, D.; Herbeck, J. T.; Limou, S.; An, P.; Martinson, J. J.; Spadoni, J. L.; Therwath, A.; Veldink, J. H.; van den Berg, L. H.; Taing, L.; Labib, T.; Mellak, S.; Montes, M.; Delfraissy, J. F.; Schachter, F.; Winkler, C.; Froguel, P.; Mullins, J. I.; Schuitemaker, H.; Zagury, J. F.
  3. Jaids-Journal of Acquired Immune Deficiency Syndromes. 2011, Mar; 56(3): 279-284.
  1. 9.   Associations of 9p21 variants with cutaneous malignant melanoma, nevi, and pigmentation phenotypes in melanoma-prone families with and without CDKN2A mutations
  2. Yang, X. R.; Liang, X. Y.; Pfeiffer, R. M.; Wheeler, W.; Maeder, D.; Burdette, L.; Yeager, M.; Chanock, S.; Tucker, M. A.; Goldstein, A. M.
  3. Familial Cancer. 2010, Dec; 9(4): 625-633.
  1. 10.   Hundreds of variants clustered in genomic loci and biological pathways affect human height
  2. Allen, H. L.; Estrada, K.; Lettre, G.; Berndt, S. I.; Weedon, M. N.; Rivadeneira, F.; Willer, C. J.; Jackson, A. U.; Vedantam, S.; Raychaudhuri, S.; Ferreira, T.; Wood, A. R.; Weyant, R. J.; Segre, A. V.; Speliotes, E. K.; Wheeler, E.; Soranzo, N.; Park, J. H.; Yang, J.; Gudbjartsson, D.; Heard-Costa, N. L.; Randall, J. C.; Qi, L.; Smith, A. V.; Magi, R.; Pastinen, T.; Liang, L.; Heid, I. M.; Luan, J.; Thorleifsson, G.; Winkler, T. W.; Goddard, M. E.; Lo, K. S.; Palmer, C.; Workalemahu, T.; Aulchenko, Y. S.; Johansson, A.; Zillikens, M. C.; Feitosa, M. F.; Esko, T.; Johnson, T.; Ketkar, S.; Kraft, P.; Mangino, M.; Prokopenko, I.; Absher, D.; Albrecht, E.; Ernst, F.; Glazer, N. L.; Hayward, C.; Hottenga, J. J.; Jacobs, K. B.; Knowles, J. W.; Kutalik, Z.; Monda, K. L.; Polasek, O.; Preuss, M.; Rayner, N. W.; Robertson, N. R.; Steinthorsdottir, V.; Tyrer, J. P.; Voight, B. F.; Wiklund, F.; Xu, J. F.; Zhao, J. H.; Nyholt, D. R.; Pellikka, N.; Perola, M.; Perry, J. R. B.; Surakka, I.; Tammesoo, M. L.; Altmaier, E. L.; Amin, N.; Aspelund, T.; Bhangale, T.; Boucher, G.; Chasman, D. I.; Chen, C.; Coin, L.; Cooper, M. N.; Dixon, A. L.; Gibson, Q.; Grundberg, E.; Hao, K.; Junttila, M. J.; Kaplan, L. M.; Kettunen, J.; Konig, I. R.; Kwan, T.; Lawrence, R. W.; Levinson, D. F.; Lorentzon, M.; McKnight, B.; Morris, A. P.; Muller, M.; Ngwa, J. S.; Purcell, S.; Rafelt, S.; Salem, R. M.; Salvi, E.; Sanna, S.; Shi, J. X.; Sovio, U.; Thompson, J. R.; Turchin, M. C.; Vandenput, L.; Verlaan, D. J.; Vitart, V.; White, C. C.; Ziegler, A.; Almgren, P.; Balmforth, A. J.; Campbell, H.; Citterio, L.; De Grandi, A.; Dominiczak, A.; Duan, J.; Elliott, P.; Elosua, R.; Eriksson, J. G.; Freimer, N. B.; Geus, E. J. C.; Glorioso, N.; Haiqing, S.; Hartikainen, A. L.; Havulinna, A. S.; Hicks, A. A.; Hui, J. N.; Igl, W.; Illig, T.; Jula, A.; Kajantie, E.; Kilpelaeinen, T. O.; Koiranen, M.; Kolcic, I.; Koskinen, S.; Kovacs, P.; Laitinen, J.; Liu, J. J.; Lokki, M. L.; Marusic, A.; Maschio, A.; Meitinger, T.; Mulas, A.; Pare, G.; Parker, A. N.; Peden, J. F.; Petersmann, A.; Pichler, I.; Pietilainen, K. H.; Pouta, A.; Riddertrale, M.; Rotter, J. I.; Sambrook, J. G.; Sanders, A. R.; Sanders, A. R.; Schmidt, C. O.; Sinisalo, J.; Smit, J. H.; Stringham, H. M.; Walters, G. B.; Widen, E.; Wild, S. H.; Willemsen, G.; Zagato, L.; Zgaga, L.; Zitting, P.; Alavere, H.; Farrall, M.; McArdle, W. L.; Nelis, M.; Peters, M. J.; Ripatti, S.; Meurs, J. B. J.; Aben, K. K.; Ardlie, K. G.; Beckmann, J. S.; Beilby, J. P.; Bergman, R. N.; Bergmann, S.; Collins, F. S.; Cusi, D.; den Heijer, M.; Eiriksdottir, G.; Gejman, P. V.; Hall, A. S.; Hamsten, A.; Huikuri, H. V.; Iribarren, C.; Kahonen, M.; Kaprio, J.; Kathiresan, S.; Kiemeney, L.; Kocher, T.; Launer, L. J.; Lehtimaki, T.; Melander, O.; Mosley, T. H.; Musk, A. W.; Nieminen, M. S.; O'Donnell, C. J.; Ohlsson, C.; Oostra, B.; Palmer, L. J.; Raitakari, O.; Ridker, P. M.; Rioux, J. D.; Rissanen, A.; Rivolta, C.; Schunkert, H.; Shuldiner, A. R.; Siscovick, D. S.; Stumvoll, M.; Tonjes, A.; Tuomilehto, J.; van Ommen, G. J.; Viikari, J.; Heath, A. C.; Martin, N. G.; Montgomery, G. W.; Province, M. A.; Kayser, M.; Arnold, A. M.; Atwood, L. D.; Boerwinkle, E.; Chanock, S. J.; Deloukas, P.; Gieger, C.; Gronberg, H.; Hall, P.; Hattersley, A. T.; Hengstenberg, C.; Hoffman, W.; Lathrop, G. M.; Salomaa, V.; Schreiber, S.; Uda, M.; Waterworth, D.; Wright, A. F.; Assimes, T. L.; Barroso, I.; Hofman, A.; Mohlke, K. L.; Boomsma, D. I.; Caulfield, M. J.; Cupples, L. A.; Erdmann, J.; Fox, C. S.; Gudnason, V.; Gyllensten, U.; Harris, T. B.; Hayes, R. B.; Jarvelin, M. R.; Mooser, V.; Munroe, P. B.; Ouwehand, W. H.; Penninx, B. W.; Pramstaller, P. P.; Quertermous, T.; Rudan, I.; Samani, N. J.; Spector, T. D.; Volzke, H.; Watkins, H.; Wilson, J. F.; Groop, L. C.; Haritunians, T.; Hu, F. B.; Kaplan, R. C.; Metspalu, A.; North, K. E.; Schlessinger, D.; Wareham, N. J.; Hunter, D. J.; O'Connell, J. R.; Strachan, D. P.; Schadt, H. E.; Thorsteinsdottir, U.; Peltonen, L.; Uitterlinden, A. G.; Visscher, P. M.; Chatterjee, N.; Loos, R. J. F.; Boehnke, M.; McCarthy, M. I.; Ingelsson, E.; Lindgren, C. M.; Abecasis, G. R.; Stefansson, K.; Frayling, T. M.; Hirschhorn, J. N.; Procardis, C.
  3. Nature. 2010, Oct; 467(7317): 832-838.
  1. 11.   A Custom 148 Gene-Based Resequencing Chip and the SNP Explorer Software: New Tools to Study Antibody Deficiency
  2. Wang, H. Y.; Gopalan, V.; Aksentijevich, I.; Yeager, M.; Ma, C. A.; Mohamoud, Y. A.; Quinones, M.; Matthews, C.; Boland, J.; Niemela, J. E.; Torgerson, T. R.; Giliani, S.; Uzel, G.; Orange, J. S.; Shapiro, R.; Notarangelo, L.; Ochs, H. D.; Fleisher, T.; Kastner, D.; Chanock, S. J.; Jain, A.
  3. Human Mutation. 2010, Sep; 31(9): 1080-1088.
  1. 12.   Stereoselective binding of chiral ligands to single nucleotide polymorphisms of the human organic cation transporter-1 determined using cellular membrane affinity chromatography
  2. Moaddel, R.; Bighi, F.; Yamaguchi, R.; Patel, S.; Ravichandran, S.; Wainer, I. W.
  3. Analytical Biochemistry. 2010, Jun; 401(1): 148-153.
  1. 13.   MouseIndelDB: a database integrating genomic indel polymorphisms that distinguish mouse strains
  2. Akagi, K.; Stephens, R. M.; Li, J. F.; Evdokimov, E.; Kuehn, M. R.; Volfovsky, N.; Symer, D. E.
  3. Nucleic Acids Research. 2010, Jan; 38(Database issue): D600-D606.
  1. 14.   High-throughput single nucleotide polymorphism genotyping using nanofluidic Dynamic Arrays
  2. Wang, J.; Lin, M.; Crenshaw, A.; Hutchinson, A.; Hicks, B.; Yeager, M.; Berndt, S.; Huang, W. Y.; Hayes, R. B.; Chanock, S. J.; Jones, R. C.; Ramakrishnan, R.
  3. Bmc Genomics. 2009 10
  1. 15.   Genome-wide association study provides evidence for a breast cancer risk locus at 6q22-33
  2. Gold, B.; Kirchhoff, T.; Stefanov, S.; Lautenberger, J.; Viale, A.; Garber, J.; Friedman, E.; Narod, S.; Olshen, A. B.; Gregersen, P.; Kosarin, K.; Olsh, A.; Bergeron, J.; Ellis, N. A.; Klein, R. J.; Clark, A. G.; Norton, L.; Dean, M.; Boyd, J.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2008 105(11): 4340-4345.
  1. 16.   Caspase polymorphisms and genetic susceptibility to multiple myeloma
  2. Hosgood, H. D.; Baris, D.; Zhang, Y.; Zhu, Y.; Zheng, T.; Yeager, M.; Welch, R.; Zahm, S.; Chanock, S.; Rothman, N.; Lan, Q.
  3. Hematological Oncology. 2008 26(3): 148-151.
  1. 17.   Risk for HIV-1 infection associated with a common CXCL12 (SDF1) polymorphism and CXCR4 variation in an African population
  2. Petersen, D. C.; Glashoff, R. H.; Shrestha, S.; Bergeron, J.; Laten, A.; Gold, B.; van Rensburg, E. J.; Dean, M.; Hayes, V. M.
  3. Jaids-Journal of Acquired Immune Deficiency Syndromes. 2005, DEC 15; 40(5): 521-526.
  1. 18.   Haplotype analysis of the SDF-1 (CXCL12) gene in a longitudinal HIV-1/AIDS cohort study
  2. Modi, W. S.; Scott, K.; Goedert, J. J.; Vlahov, D.; Buchbinder, S.; Detels, R.; Donfield, S.; O'Brien, S. J.; Winkler, C.
  3. Genes and Immunity. 2005, DEC; 6(8): 691-698.
  1. 19.   High level of functional polymorphism indicates a unique role of natural selection at human immune system loci
  2. Hughes, A. L.; Packer, B.; Welch, R.; Chanock, S. J.; Yeager, M.
  3. Immunogenetics. 2005, DEC; 57(11): 821-827.
  1. 20.   Genetic variation, nucleotide diversity, and linkage disequilibrium in seven telomere stability genes suggest that these genes may be under constraint
  2. Savage, S. A.; Stewart, B. J.; Eckert, A.; Kiley, M.; Liao, J. S.; Chanock, S. J.
  3. Human Mutation. 2005, OCT; 26(4): 343-350.
  1. 21.   Effects of DNA mass on multiple displacement whole genome amplification and genotyping performance
  2. Bergen, A. W.; Qi, Y.; Haque, K. A.; Welch, R. A.; Chanock, S. J.
  3. BMC Biotechnology. 2005, SEP 16; 5
  1. 22.   Single nucleotide polymorphisms and haplotypes in the IL10 region associated with HCV clearance
  2. Oleksyk, T. K.; Thio, C. L.; Truelove, A. L.; Goedert, J. J.; Donfield, S. M.; Kirk, G. D.; Thomas, D. L.; O'Brien, S. J.; Smith, M. W.
  3. Genes and Immunity. 2005, JUN; 6(4): 347-357.
  1. 23.   A common haplotype in the complement regulatory gene factor H (HF1/CFH) predisposes individuals to age-related macular degeneration
  2. Hageman, G. S.; Anderson, D. H.; Johnson, L. V.; Hancox, L. S.; Taiber, A. J.; Hardisty, L. I.; Hageman, J. L.; Stockman, H. A.; Borchardt, J. D.; Gehrs, K. M.; Smith, R. J. H.; Silvestri, G.; Russell, S. R.; Klaver, C. C. W.; Barbazetto, I.; Chang, S.; Yannuzzi, L. A.; Barile, G. R.; Merriam, J. C.; Smith, R. T.; Olsh, A. K.; Bergeron, J.; Zernant, J.; Merriam, J. E.; Gold, B.; Dean, M.; Allikmets, R.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2005, MAY 17; 102(20): 7227-7232.
  1. 24.   Variants in the Wilms' tumor gene are associated with focal segmental glomerulosclerosis in the African American population
  2. Orloff, M. S.; Iyengar, S. K.; Winkler, C. A.; Goddard, K. A. B.; Dart, R. A.; Ahuja, T. S.; Mokrzycki, M.; Briggs, W. A.; Korbet, S. M.; Kimmel, P. L.; Simon, E. E.; Trachtman, H.; Vlahov, D.; Michel, D. M.; Berns, J. S.; Smith, M. C.; Schelling, J. R.; Sedor, J. R.; Kopp, J. B.
  3. Physiological Genomics. 2005, APR 14; 21(2): 212-221.
  1. 25.   The linkage disequilibrium maps of three human chromosomes across four populations reflect their demographic history and a common underlying recombination pattern
  2. De La Vega, F. M.; Isaac, H.; Collins, A.; Scafe, C. R.; Halldorsson, B. V.; Su, X. P.; Lippert, R. A.; Wang, Y.; Laig-Webster, M.; Koehler, R. T.; Ziegle, J. S.; Wogan, L. T.; Stevens, J. F.; Leinen, K. M.; Olson, S. J.; Guegler, K. J.; You, X. Q.; Xu, L. H.; Hemken, H. G.; Kalush, F.; Itakura, M.; Zheng, Y.; de The, G.; O'Brien, S. J.; Clark, A. G.; Istrail, S.; Hunkapiller, M. W.; Spier, E. G.; Gilbert, D. A.
  3. Genome Research. 2005, APR; 15(4): 454-462.
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