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  1. 1.   Design of soluble HIV-1 envelope trimers free of covalent gp120-gp41 bonds with prevalent native-like conformation
  2. Zhang, Peng; Gorman, Jason; Tsybovsky,Yaroslav; Lu, Maolin; Liu, Qingbo; Gopan, Vinay; Singh, Mamta; Lin, Yin; Miao, Huiyi; Seo, Yuna; Kwon, Alice; Olia, Adam S; Chuang, Gwo-Yu; Geng, Hui; Lai, Yen-Ting; Zhou, Tongqing; Mascola, John R; Mothes, Walther; Kwong, Peter D; Lusso, Paolo
  3. Cell Reports. 2024, Jul 18; 43(8): 114518.
  1. 2.   The capsid lattice engages a bipartite NUP153 motif to mediate nuclear entry of HIV-1 cores
  2. Shen, Qi; Kumari, Sushila; Xu, Chaoyi; Jang, Sooin; Shi, Jiong; Burdick,Ryan; Levintov, Lev; Xiong, Qiancheng; Wu, Chunxiang; Devarkar, Swapnil C; Tian, Taoran; Tripler, Therese N; Hu, Yingxia; Yuan, Shuai; Temple, Joshua; Feng, Qingzhou; Lusk, C Patrick; Aiken, Christopher; Engelman, Alan N; Perilla, Juan R; Pathak,Vinay; Lin, Chenxiang; Xiong, Yong
  3. Proceedings of the National Academy of Sciences of the United States of America. 2023, Mar 28; 120(13): e2202815120.
  1. 3.   Interprotomer disulfide-stabilized variants of the human metapneumovirus fusion glycoprotein induce high titer-neutralizing responses
  2. Stewart-Jones, Guillaume B. E.; Gorman, Jason; Ou, Li; Zhang, Baoshan; Joyce, M. Gordon; Yang, Lijuan; Cheng, Cheng; Chuang, Gwo-Yu; Foulds, Kathryn E.; Kong, Wing-Pui; Olia, Adam S.; Sastry, Mallika; Shen, Chen-Hsiang; Todd, John-Paul; Tsybovsky,Yaroslav; Verardi, Raffaello; Yang, Yongping; Collins, Peter L.; Corti, Davide; Lanzavecchia, Antonio; Scorpio, Diana G.; Mascola, John R.; Buchholz, Ursula J.; Kwong, Peter D.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2021, Sep 28; 118(39):
  1. 4.   Newcastle Disease Virus-Like Particles Displaying Prefusion-Stabilized SARS-CoV-2 Spikes Elicit Potent Neutralizing Responses
  2. Yang, Yongping; Shi, Wei; Abiona, Olubukola M.; Nazzari, Alexandra; Olia, Adam S.; Ou, Li; Phung, Emily; Stephens, Tyler; Tsybovsky,Yaroslav; Verardi, Raffaello; Wang, Shuishu; Werner, Anne; Yap, Christina; Ambrozak, David; Bylund, Tatsiana; Liu, Tracy; Nguyen, Richard; Wang, Lingshu; Zhang, Baoshan; Zhou, Tongqing; Chuang, Gwo-Yu; Graham, Barney S.; Mascola, John R.; Corbett, Kizzmekia S.; Kwong, Peter D.
  3. Vaccines. 2021, Jan 21; 9(2):
  1. 5.   Automated Design by Structure-Based Stabilization and Consensus Repair to Achieve Prefusion-Closed Envelope Trimers in a Wide Variety of HIV Strains
  2. Rawi, Reda; Rutten, Lucy; Lai, Yen-Ting; Olia, Adam S; Blokland, Sven; Juraszek, Jarek; Shen, Chen-Hsiang; Tsybovsky,Yaroslav; Verardi, Raffaello; Yang, Yongping; Zhang, Baoshan; Zhou, Tongqing; Chuang, Gwo-Yu; Kwong, Peter D; Langedijk, Johannes P M
  3. Cell reports. 2020, Nov 24; 33(8): 108432.
  1. 6.   Chemical and structural studies provide a mechanistic basis for recognition of the MYC G-quadruplex
  2. Calabrese,Dave; Chen,Xiang; Leon, Elena C.; Gaikwad, Snehal M.; Phyo, Zaw; Hewitt, William M.; Alden, Stephanie; Hilimire, Thomas A.; He, Fahu; Michalowski, Aleksandra M.; Simmons, John K.; Saunders, Lindsey B.; Zhang, Shuling; Connors, Daniel; Walters,Kylie; Mock, Beverly A.; Schneekloth,Jay
  3. NATURE COMMUNICATIONS. 2018, Oct 12; 9(1): 4229.
  1. 7.   Interdomain Stabilization Impairs CD4 Binding and Improves Immunogenicity of the HIV-1 Envelope Trimer
  2. Zhang, Peng; Gorman, Jason; Geng, Hui; Liu, Qingbo; Lin, Yin; Tsybovsky, Yaroslav; Go, Eden P; Dey, Barna; Andine, Tsion; Kwon, Alice; Patel, Mit; Gururani, Deepali; Uddin, Ferzan; Guzzo, Christina; Cimbro, Raffaello; Miao, Huiyi; McKee, Krisha; Chuang, Gwo-Yu; Martin, Loïc; Sironi, Francesca; Malnati, Mauro S; Desaire, Heather; Berger, Edward A; Mascola, John R; Dolan, Michael A; Kwong, Peter D; Lusso, Paolo
  3. Cell Host & Microbe. 2018, Jun 13; 23(6): 832-844.e6.
  1. 8.   Soluble Prefusion Closed DS-SOSIP.664-Env Trimers of Diverse HIV-1 Strains
  2. Joyce, M Gordon; Georgiev, Ivelin S; Yang, Yongping; Druz, Aliaksandr; Geng, Hui; Chuang, Gwo-Yu; Kwon, Young Do; Pancera, Marie; Rawi, Reda; Sastry, Mallika; Stewart-Jones, Guillaume B E; Zheng, Angela; Zhou, Tongqing; Choe, Misook; Van Galen, Joseph G; Chen, Rita E; Lees, Christopher R; Narpala, Sandeep; Chambers, Michael; Tsybovsky, Yaroslav; Baxa, Ulrich; McDermott, Adrian B; Mascola, John R; Kwong, Peter D
  3. Cell reports. 2017, Dec 05; 21(10): 2992-3002.
  1. 9.   Structure-Based Design of a Soluble Prefusion-Closed HIV-1 Env Trimer with Reduced CD4 Affinity and Improved Immunogenicity
  2. Chuang, Gwo-Yu; Geng, Hui; Pancera, Marie; Xu, Kai; Cheng, Cheng; Acharya, Priyamvada; Chambers, Michael; Druz, Aliaksandr; Tsybovsky, Yaroslav; Wanninger, Timothy G.; Yang, Yongping; Doria-Rose, Nicole A.; Georgiev, Ivelin S.; Gorman, Jason; Joyce, M. Gordon; O'Dell, Sijy; Zhou, Tongqing; McDermott, Adrian B.; Mascola, John R.; Kwong, Peter D.
  3. Journal of Virology. 2017, April 28; 91(10): e02268.
  1. 10.   Vascular endothelial growth factor receptor 2 inhibition in-vivo affects tumor vasculature in a tumor type-dependent way and downregulates vascular endothelial growth factor receptor 2 protein without a prominent role for miR-296
  2. Langenkamp, E.; Zwiers, P. J.; Moorlag, H. E.; Leenders, W. P.; Croix, B. S.; Molema, G.
  3. Anti-Cancer Drugs. 2012, Feb; 23(2): 161-172.
  1. 11.   Polymeric Lipid Assemblies as Novel Theranostic Tools
  2. Puri, A.; Blumenthal, R.
  3. Accounts of Chemical Research. 2011, Oct; 44(10): 1071-1079.
  1. 12.   Virus-cell and cell-cell fusion mediated by the HIV-1 envelope glycoprotein is inhibited by short gp41 N-terminal membrane-anchored peptides lacking the critical pocket domain
  2. Wexler-Cohen, Y.; Ashkenazi, A.; Viard, M.; Blumenthal, R.; Shai, Y.
  3. Faseb Journal. 2010, Nov; 24(11): 4196-4202.
  1. 13.   Light-sensitive lipid-based nanoparticles for drug delivery: design principles and future considerations for biological applications
  2. Yavlovich, A.; Smith, B.; Gupta, K.; Blumenthal, R.; Puri, A.
  3. Molecular Membrane Biology. 2010, Oct; 27(7): 364-381.
  1. 14.   Radioactive gold nanoparticles in cancer therapy: therapeutic efficacy studies of GA-(AuNP)-Au-198 nanoconstruct in prostate tumor-bearing mice
  2. Chanda, N.; Kan, P.; Watkinson, L. D.; Shukla, R.; Zambre, A.; Carmack, T. L.; Engelbrecht, H.; Lever, J. R.; Katti, K.; Fent, G. M.; Casteel, S. W.; Smith, C. J.; Miller, W. H.; Jurisson, S.; Boote, E.; Robertson, J. D.; Cutler, C.; Dobrovolskaia, M.; Kannan, R.; Katti, K. V.
  3. Nanomedicine-Nanotechnology Biology and Medicine. 2010, Apr; 6(2): 201-209.
  1. 15.   Application of ring-closing metathesis macrocyclization to the development of Tsg101-binding antagonists
  2. Liu, F.; Stephen, A. G.; Waheed, A. A.; Freed, E. O.; Fisher, R. J.; Burke, T. R.
  3. Bioorganic & Medicinal Chemistry Letters. 2010, Jan; 20(1): 318-321.
  1. 16.   Engineered Human Antibody Constant Domains with Increased Stability
  2. Gong, R.; Vu, B. K.; Feng, Y.; Prieto, D. A.; Dyba, M. A.; Walsh, J. D.; Prabakaran, P.; Veenstra, T. D.; Tarasov, S. G.; Ishima, R.; Dimitrov, D. S.
  3. Journal of Biological Chemistry. 2009 284(21): 14203-14210.
  1. 17.   A Sulfilimine Bond Identified in Collagen IV
  2. Vanacore, R.; Ham, A.; Voehler, M.; Sanders, C. R.; Conrads, T. P.; Veenstra, T. D.; Sharpless, K. B.; Dawson, P. E.; Hudson, B. G.
  3. Science. 2009 325(5945): 1230-1234.
  1. 18.   Quantitative assessment of the p53-Mdm2 feedback loop using protein lysate microarrays
  2. Ramalingam, S.; Honkanen, P.; Young, L.; Shimura, T.; Austin, J.; Steeg, P. S.; Nishizuka, S.
  3. Cancer Research. 2007, Jul; 67(13): 6247-6252.
  1. 19.   Impact of pro segments on the folding and function of human neutrophil alpha-defensins
  2. Wu, Z. B.; Li, X. Q.; Ericksen, B.; de Leeuw, E.; Zou, G. Z.; Zeng, P. Y.; Xie, C.; Li, C.; Lubkowski, J.; Lu, W. Y.; Lu, W. Y.
  3. Journal of Molecular Biology. 2007, Apr; 368(2): 537-549.
  1. 20.   Catalytic role of proton transfers in the formation of a tetrahedral adduct in a serine carboxyl peptidase
  2. Guo, H. B.; Wlodawer, A.; Nakayama, T.; Xu, Q.; Guo, H.
  3. Biochemistry. 2006, Aug; 45(30): 9129-9137.
  1. 21.   Processing, catalytic activity and crystal structures of kumamolisin-As with an engineered active site
  2. Okubo, A.; Li, M.; Ashida, M.; Oyama, H.; Gustchina, A.; Oda, K.; Dunn, B. M.; Wlodawer, A.; Nakayama, T.
  3. Febs Journal. 2006, Jun; 273(11): 2563-2576.
  1. 22.   Injectable formulation of disodium 1-[2-(carboxylato)pyrrolidin-1-yl]diazen-1-ium-1,2-diolate (PROLI/NO), an ultrafast nitric oxide donor prodrug
  2. Waterhouse, D. J.; Saavedra, J. E.; Davies, K. M.; Citro, M. L.; Xu, X.; Powell, D. A.; Grimes, G. J.; Potti, G. K.; Keefer, L. K.
  3. Journal of Pharmaceutical Sciences. 2006, JAN; 95(1): 108-115.
  1. 23.   Nucleic acid binding and chaperone properties of HIV-1 Gag and nucleocapsid proteins
  2. Cruceanu, M.; Urbaneja, M. A.; Hixson, C. V.; Johnson, D. G.; Datta, S. A.; Fivash, M. J.; Stephen, A. G.; Fisher, R. J.; Gorelick, R. J.; Casas-Finet, J. R.; Rein, A.; Rouzina, I.; Williams, M. C.
  3. Nucleic Acids Research. 2006 34(2): 593-605.
  1. 24.   A general acid-base mechanism for the stabilization of a tetrahedral adduct in a serine-carboxyl peptidase: A computational study
  2. Guo, H. B.; Wlodawer, A.; Guo, H.
  3. Journal of the American Chemical Society. 2005, NOV 16; 127(45): 15662-15663.
  1. 25.   Reconstruction of the conserved beta-bulge in mammalian defensins using D-amino acids
  2. Xie, C.; Prahl, A.; Ericksen, B.; Wu, Z. B.; Zeng, P. Y.; Li, X. Q.; Lu, W. Y.; Lubkowski, J.; Lu, W. Y.
  3. Journal of Biological Chemistry. 2005, SEP 23; 280(38): 32921-32929.
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