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  1. 1.   Inferring phase transitions and critical exponents from limited observations with thermodynamic maps
  2. Herron, Lukas; Mondal, Kinjal; Schneekloth,Jay; Tiwary, Pratyush
  3. Proceedings of the National Academy of Sciences of the United States of America. 2024, Dec 24; 121(52): e2321971121.
  1. 2.   Autonomous System for Tumor Resection (ASTR) - Dual-Arm Robotic Midline Partial Glossectomy
  2. Ge, Jiawei; Kam, Michael; Opfermann, Justin D; Saeidi, Hamed; Leonard, Simon; Mady, Leila J; Schnermann,Martin; Krieger, Axel
  3. IEEE Robotics and Automation Letters. 2024, Feb; 9(2): 1166-1173.
  1. 3.   Structure of the HIV immature lattice allows for essential lattice remodeling within budded virions
  2. Guo, Sikao; Saha,Ipsita; Saffarian, Saveez; Johnson, Margaret E
  3. eLife. 2023, Jul 12; 12
  1. 4.   Gene network landscape of mouse splenocytes reveals integrin complex as the A151 ODN-responsive hub molecule in the immune transcriptome
  2. Yazar, Volkan; Yilmaz, Ismail Cem; Bulbul, Artun; Klinman, Dennis M; Gursel, Ihsan
  3. Molecular Therapy. Nucleic Acids. 2023, Mar 14; 31: 553-565.
  1. 5.   Single-cell transcriptomes underscore genetically distinct tumor characteristics and microenvironment for hereditary kidney cancers
  2. Jikuya, Ryosuke; Murakami, Koichi; Nishiyama, Akira; Kato, Ikuma; Furuya, Mitsuko; Nakabayashi, Jun; Ramilowski, Jordan A; Hamanoue, Haruka; Maejima, Kazuhiro; Fujita, Masashi; Mitome, Taku; Ohtake, Shinji; Noguchi, Go; Kawaura, Sachi; Odaka, Hisakazu; Kawahara, Takashi; Komeya, Mitsuru; Shinoki, Risa; Ueno, Daiki; Ito, Hiroki; Ito, Yusuke; Muraoka, Kentaro; Hayashi, Narihiko; Kondo, Keiichi; Nakaigawa, Noboru; Hatano, Koji; Baba, Masaya; Suda, Toshio; Kodama, Tatsuhiko; Fujii, Satoshi; Makiyama, Kazuhide; Yao, Masahiro; Shuch, Brian M; Schmidt,Laura; Linehan, W Marston; Nakagawa, Hidewaki; Tamura, Tomohiko; Hasumi, Hisashi
  3. iScience. 2022, Jun 17; 25(6): 104463.
  1. 6.   Harnessing endophenotypes and network medicine for Alzheimer's drug repurposing
  2. Fang, Jiansong; Pieper, Andrew A.; Nussinov,Ruth; Lee, Garam; Bekris, Lynn; Leverenz, James B.; Cummings, Jeffrey; Cheng, Feixiong
  3. Medicinal research reviews. 2020, NOV; 40(6): 2386-2426.
  1. 7.   Tailored design of protein nanoparticle scaffolds for multivalent presentation of viral glycoprotein antigens
  2. Ueda, George; Antanasijevic, Aleksandar; Fallas, Jorge A; Sheffler, William; Copps, Jeffrey; Ellis, Daniel; Hutchinson, Geoffrey B; Moyer, Adam; Yasmeen, Anila; Tsybovsky,Yaroslav; Park, Young-Jun; Bick, Matthew J; Sankaran, Banumathi; Gillespie, Rebecca A; Brouwer, Philip Jm; Zwart, Peter H; Veesler, David; Kanekiyo, Masaru; Graham, Barney S; Sanders, Rogier W; Moore, John P; Klasse, Per Johan; Ward, Andrew B; King, Neil P; Baker, David
  3. eLife. 2020, Aug 04; 9: pii: 9:e57659.
  1. 8.   Characterization of Cationic Bolaamphiphile Vesicles for siRNA Delivery into Tumors and Brain
  2. Kim, Taejin; Viard,Mathias; Afonin, Kirill A; Gupta, Kshitij; Popov, Mary; Salotti,Jacqueline; Johnson,Peter; Linder, Charles; Heldman, Eliahu; Shapiro,Bruce
  3. Molecular therapy. Nucleic acids. 2020, JUN 5; 20: 359-372.
  1. 9.   A Systems Chemoproteomic Analysis of Acyl-CoA/Protein Interaction Networks
  2. Levy, Michaella J; Montgomery, David C; Sardiu, Mihaela E; Montano,Jose; Bergholtz, Sarah E; Nance,Kellie; Thorpe,Abbey; Fox,Stephen; Lin, Qishan; Andresson,Thorkell; Florens, Laurence; Washburn, Michael P; Meier,Jordan
  3. Cell chemical biology. 2020, MAR 19; 27(3): 322-+.
  1. 10.   Membrane interactions of the globular domain and the hypervariable region of KRAS4b define its unique diffusion behavior
  2. Goswami,Debanjan; Chen,De; Yang, Yue; Gudla, Prabhakar R; Columbus,John; Worthy,Karen; Rigby, Megan; Wheeler,Maddie; Mukhopadhyay,Suman; Powell,Katie; Burgan, William; Wall,Vanessa; Esposito,Dom; Simanshu,Dhirendra; Lightstone, Felice C; Nissley,Dwight; McCormick, Frank; Turbyville,Tommy
  3. eLife. 2020, Jan 20; 9
  1. 11.   A Systems Pharmacology Approach Uncovers Wogonoside as an Angiogenesis Inhibitor of Triple-Negative Breast Cancer by Targeting Hedgehog Signaling
  2. Huang, Yujie; Fang, Jiansong; Lu, Weiqiang; Wang, Zihao; Wang, Qi; Hou, Yuan; Jiang, Xingwu; Reizes, Ofer; Lathia, Justin; Nussinov,Ruth; Eng, Charis; Cheng, Feixiong
  3. Cell chemical biology. 2019, Aug 15; 26(8): 1143-1158.e.
  1. 12.   Decreased antibiotic susceptibility driven by global remodeling of the Klebsiella pneumoniae proteome
  2. Keasey, Sarah L; Suh, Moo-Jin; Das, Sudipto; Blancett, Candace D; Zeng, Xiankun; Andresson, Thorkell; Sun, Mei G; Ulrich, Robert G
  3. Molecular & cellular proteomics : MCP. 2019, Apr; 18(4): 657-668.
  1. 13.   Blood Interactions, Pharmacokinetics, and Depth-Dependent Ablation of Rat Mammary Tumors with Photoactivatable, Liposomal Doxorubicin
  2. Carter, Kevin A.; Luo, Dandan; Geng, Jumin; Stern, Steve; Lovell, Jonathan F.
  3. Molecular cancer therapeutics. 2019, Mar; 18(3): 592-601.
  1. 14.   Integrated proteotranscriptomics of breast cancer reveals globally increased protein-mRNA concordance associated with subtypes and survival
  2. Tang, Wei; Zhou, Ming; Dorsey, Tiffany H; Prieto, DaRue A; Wang, Xin W; Ruppin, Eytan; Veenstra, Timothy D; Ambs, Stefan
  3. Genome medicine. 2018, Dec 03; 10(1): 94.
  1. 15.   Development and Evaluation of Stimuli-Responsive Chimeric Nanostructures
  2. Naziris, Nikolaos; Pippa, Natassa; Stellas, Dimitrios; Chrysostomou, Varvara; Pispas, Stergios; Demetzos, Costas; Libera, Marcin; Trzebicka, Barbara
  3. AAPS PharmSciTech. 2018, Oct; 19(7): 2971-2989.
  1. 16.   Lessons from CKD-Related Genetic Association Studies-Moving Forward
  2. Limou, Sophie; Vince, Nicolas; Parsa, Afshin
  3. Clinical journal of the American Society of Nephrology : CJASN. 2018, Jan 6; 13(1): 140-152.
  1. 17.   Cryo-EM Structures Reveal Mechanism and Inhibition of DNA Targeting by a CRISPR-Cas Surveillance Complex
  2. Guo, Tai Wei; Bartesaghi, Alberto; Yang, Hui; Falconieri, Veronica; Rao, Prashant; Merk, Alan; Eng, Edward T; Raczkowski, Ashleigh M; Fox, Tara; Earl, Lesley A; Patel, Dinshaw J; Subramaniam, Sriram
  3. Cell. 2017, Oct 05; 171(2): 414-426.e12.
  1. 18.   The Reactive Species Interactome: Evolutionary Emergence, Biological Significance, and Opportunities for Redox Metabolomics and Personalized Medicine
  2. Cortese-Krott, Miriam M.; Koning, Anne; Kuhnle, Gunter G. C.; Nagy, Peter; Bianco, Christopher L.; Pasch, Andreas; Wink, David; Fukuto, Jon M.; Jackson, Alan A.; van Goor, Harry; Olson, Kenneth R.; Feelisch, Martin
  3. Antioxidants & Redox Signaling. 2017, Oct 1; 27(10): 684-712.
  1. 19.   Cancer stem cells: a systems biology view of their role in prognosis and therapy
  2. Mertins, S. D.
  3. Anti-Cancer Drugs. 2014, Apr; 25(4): 353-67.
  1. 20.   Polymeric Lipid Assemblies as Novel Theranostic Tools
  2. Puri, A.; Blumenthal, R.
  3. Accounts of Chemical Research. 2011, Oct; 44(10): 1071-1079.
  1. 21.   Prevalence and Significance of Plasmid Maintenance Functions in the Virulence Plasmids of Pathogenic Bacteria
  2. Sengupta, M.; Austin, S.
  3. Infection and Immunity. 2011, Jul; 79(7): 2502-2509.
  1. 22.   A formal MIM specification and tools for the common exchange of MIM diagrams: an XML-Based format, an API, and a validation method
  2. Luna, A.; Karac, E. I.; Sunshine, M.; Chang, L.; Nussinov, R.; Aladjem, M. I.; Kohn, K. W.
  3. Bmc Bioinformatics. 2011, May; 12: 13.
  1. 23.   A novel class of photo-triggerable liposomes containing DPPC:DC8,9PC as vehicles for delivery of doxorubcin to cells
  2. Yavlovich, A.; Singh, A.; Blumenthal, R.; Puri, A.
  3. Biochimica Et Biophysica Acta-Biomembranes. 2011, Jan; 1808(1): 117-126.
  1. 24.   Dual Mechanisms of HNO Generation by a Nitroxyl Prodrug of the Diazeniumdiolate (NONOate) Class
  2. Andrei, D.; Salmon, D. J.; Donzelli, S.; Wahab, A.; Klose, J. R.; Citro, M. L.; Saavedra, J. E.; Wink, D. A.; Miranda, K. M.; Keefer, L. K.
  3. Journal of the American Chemical Society. 2010, Nov; 132(46): 16526-16532.
  1. 25.   Rapid global structure determination of large RNA and RNA complexes using NMR and small-angle X-ray scattering
  2. Wang, Y. X.; Zuo, X. B.; Wang, J. B.; Yu, P.; Butcher, S. E.
  3. Methods. 2010, Oct; 52(2): 180-191.
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