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  1. 1.   Soluble CD13 is a potential mediator of neutrophil-induced thrombogenic inflammation in SARS-CoV-2 infection
  2. Tsou, Pei-Suen; Ali, Ramadan A; Lu, Chenyang; Sule, Gautam; Carmona-Rivera, Carmelo; Lucotti, Serena; Ikari, Yuzo; Wu, Qi; Campbell, Phillip; Gurrea-Rubio, Mikel; Maeda, Kohei; Fox, Sharon E; Brodie, William D; Mattichak, Megan N; Foster, Caroline; Tambralli, Ajay; Yalavarthi, Srilakshmi; Amin, M Asif; Kmetova, Katarina; Mazetto Fonseca, Bruna; Chong, Emily; Zuo, Yu; Maile, Michael; Imberti, Luisa; Caruso, Arnaldo; Caccuri, Francesca; Quaresima, Virginia; Sottini, Alessandra; Kuhns,Douglas; Fink,Danielle; Castagnoli, Riccardo; Delmonte, Ottavia; Kenney, Heather; Zhang, Yu; Magliocco, Mary; Su, Helen C; Notarangelo, Luigi D; Zemans, Rachel L; Mao-Draayer, Yang; Matei, Irina; Salvatore, Mirella; Lyden, David C; Kanthi, Yogendra; Kaplan, Mariana J; Knight, Jason S; Fox, David A
  3. JCI Insight. 2025, Apr 01;
  1. 2.   MERS-CoV spike vaccine-induced N-terminal domain-specific antibodies are more protective than receptor binding domain-specific antibodies
  2. Abiona, Olubukola M; Wang, Nianshuang; Leist, Sarah R; Schäfer, Alexandra; Cockrell, Adam S; Wang, Lingshu; Bangaru, Sandhya; Stevens, Laura; Graham, Rachel L; Kocher, Jacob F; Tsybovsky,Yaroslav; Kanekiyo, Masaru; Kumar, Azad; Morabito, Kaitlyn M; Rosen, Osnat; Shi, Wei; Werner, Anne; Zhang, Yi; Ziwawo, Cynthia; Dzuvor, Christian K O; Palandjian, Charis; Eastman, Connor; Matthews, Hannah R; Joseph, Jeswin; Chappell, James D; Kong, Wing-Pui; Mascola, John R; Ward, Andrew B; Denison, Mark R; Baric, Ralph; McLellan, Jason S; Graham, Barney S; Corbett-Helaire, Kizzmekia S
  3. iScience. 2025, Feb 21; 28(2): 111632.
  1. 3.   Modulating the immunodominance hierarchy of immunoglobulin germline-encoded structural motifs targeting the influenza hemagglutinin stem
  2. Ataca, Sila; Sangesland, Maya; de Paiva Fróes Rocha, Rebeca; Torrents de la Peña, Alba; Ronsard, Larance; Boyoglu-Barnum, Seyhan; Gillespie, Rebecca A; Tsybovsky,Yaroslav; Stephens,Tyler; Moin, Syed M; Lederhofer, Julia; Creanga, Adrian; Andrews, Sarah F; Barnes, Ralston M; Rohrer, Daniel; Lonberg, Nils; Graham, Barney S; Ward, Andrew B; Lingwood, Daniel; Kanekiyo, Masaru
  3. Cell Reports. 2024, Nov 22; 43(12): 114990.
  1. 4.   High-dimensional analysis of NK cells in kidney transplantation uncovers subsets associated with antibody-independent graft dysfunction
  2. Ruan, Dan Fu; Fribourg, Miguel; Yuki,Yuko; Park,Yeon-Hwa; Martin,Pat; Yu, Haocheng; Kelly, Geoffrey C; Lee, Brian H; de Real, Ronaldo M; Lee, Rachel; Geanon, Daniel; Kim-Schulze, Seunghee; Chun, Nicholas; Cravedi, Paolo; Carrington,Mary; Heeger, Peter S; Horowitz, Amir
  3. JCI insight. 2024, Nov 8; 9(21):
  1. 5.   Smyd3-mediated immuno-modulation in HPV-negative head and neck squamous cell carcinoma mouse models
  2. Tsai, Daniel E; Lovanov, Alexei; Abdelmaksoud, Abdalla; Akhtar, Jawad; Dar, Mohd Saleem; Luff, Marie; McKinnon, Katherine; Kim, Sohyoung; Robbins, Yvette; Huynh, Angel; Murali, Madhavi; Bernard, Benjamin; Sinkoe, Andrew; Luo, Xiaolin; Karim,Baktiar; Allen, Clint T; Saloura, Vassiliki
  3. iScience. 2024, Sep 20; 27(9): 110854.
  1. 6.   Design of soluble HIV-1 envelope trimers free of covalent gp120-gp41 bonds with prevalent native-like conformation
  2. Zhang, Peng; Gorman, Jason; Tsybovsky,Yaroslav; Lu, Maolin; Liu, Qingbo; Gopan, Vinay; Singh, Mamta; Lin, Yin; Miao, Huiyi; Seo, Yuna; Kwon, Alice; Olia, Adam S; Chuang, Gwo-Yu; Geng, Hui; Lai, Yen-Ting; Zhou, Tongqing; Mascola, John R; Mothes, Walther; Kwong, Peter D; Lusso, Paolo
  3. Cell Reports. 2024, Jul 18; 43(8): 114518.
  1. 7.   Protocol for cytoskeleton staining of the semi-adherent multiple myeloma cell line RPMI 8226 by immunofluorescence
  2. Osei Amponsa,Vasty; Magidson,Valentin; Walters,Kylie
  3. STAR Protocols. 2024, May 02; 5(2): 103060.
  1. 8.   NKp44/HLA-DP-dependent regulation of CD8 effector T cells by NK cells
  2. Padoan, Benedetta; Casar, Christian; Krause, Jenny; Schultheiss, Christoph; Baumdick, Martin E; Niehrs, Annika; Zecher, Britta F; Pujantell, Maria; Yuki,Yuko; Martin,Pat; Remmerswaal, Ester B M; Dekker, Tamara; van der Bom-Baylon, Nelly D; Noble, Janelle A; Carrington,Mary; Bemelman, Frederike J; van Lier, Rene A W; Binder, Mascha; Gagliani, Nicola; Bunders, Madeleine J; Altfeld, Marcus
  3. Cell Reports. 2024, Apr 12; 43(4): 114089.
  1. 9.   Functionally diverse thymic medullary epithelial cells interplay to direct central tolerance
  2. Ushio, Aya; Matsuda-Lennikov, Mami; Kalle-Youngoue,Felix; Shimizu, Akihide; Abdelmaksoud, Abdalla; Kelly, Michael C; Ishimaru, Naozumi; Takahama, Yousuke
  3. Cell Reports. 2024, Apr 05; 43(4): 114072.
  1. 10.   Developmental conversion of thymocyte-attracting cells into self-antigen-displaying cells in embryonic thymus medulla epithelium
  2. Ohigashi, Izumi; White, Andrea J; Yang, Mei-Ting; Fujimori, Sayumi; Tanaka, Yu; Jacques, Alison; Kiyonari, Hiroshi; Matsushita, Yosuke; Turan,Sevilay; Kelly, Michael C; Anderson, Graham; Takahama, Yousuke
  3. eLife. 2024, Mar 11; 12
  1. 11.   Multi-omic profiling of follicular lymphoma reveals changes in tissue architecture and enhanced stromal remodeling in high-risk patients
  2. Radtke, Andrea J; Postovalova, Ekaterina; Varlamova, Arina; Bagaev, Alexander; Sorokina, Maria; Kudryashova, Olga; Meerson, Mark; Polyakova, Margarita; Galkin, Ilia; Svekolkin, Viktor; Isaev, Sergey; Wiebe, Daniil; Sharun, Anna; Sarachakov, Alexander; Perelman, Grigory; Lozinsky, Yaroslav; Yaniv, Ziv; Lowekamp, Bradley C; Speranza, Emily; Yao, Li; Pittaluga, Stefania; Shaffer, Arthur L; Jonigk, Danny; Phelan, James D; Davies-Hill, Theresa; Huang, Da Wei; Ovcharov, Pavel; Nomie, Krystle; Nuzhdina, Ekaterina; Kotlov, Nikita; Ataullakhanov, Ravshan; Fowler, Nathan; Kelly,Michael; Muppidi, Jagan; Davis, Jeremy L; Hernandez, Jonathan M; Wilson, Wyndham H; Jaffe, Elaine S; Staudt, Louis M; Roschewski, Mark; Germain, Ronald N
  3. Cancer Cell. 2024, Feb 21; 42
  1. 12.   Antigen spacing on protein nanoparticles influences antibody responses to vaccination
  2. Ellis, Daniel; Dosey, Annie; Boyoglu-Barnum, Seyhan; Park, Young-Jun; Gillespie, Rebecca; Syeda, Hubza; Hutchinson, Geoffrey B; Tsybovsky,Yaroslav; Murphy, Michael; Pettie, Deleah; Matheson, Nick; Chan, Sidney; Ueda, George; Fallas, Jorge A; Carter, Lauren; Graham, Barney S; Veesler, David; Kanekiyo, Masaru; King, Neil P
  3. Cell Reports. 2023, Dec 13; 42(12): 113552.
  1. 13.   AP-1/c-Fos supports SIV and HIV-1 latency in CD4 T cells infected in vivo
  2. Cobos Jiménez, Viviana; Geretz, Aviva; Tokarev, Andrey; Ehrenberg, Philip K; Deletsu, Selase; Machmach, Kawthar; Mudvari, Prakriti; Howard, J Natalie; Zelkoski, Amanda; Paquin-Proulx, Dominic; Del Prete,Greg; Subra, Caroline; Boritz, Eli A; Bosque, Alberto; Thomas, Rasmi; Bolton, Diane L
  3. iScience. 2023, Oct 20; 26(10): 108015.
  1. 14.   HLA-DPA1*02:01~B1*01:01 is a risk haplotype for primary sclerosing cholangitis mediating activation of NKp44+ NK cells
  2. Zecher, Britta F; Ellinghaus, David; Schloer, Sebastian; Niehrs, Annika; Padoan, Benedetta; Baumdick, Martin E; Yuki,Yuko; Martin, Maureen P; Glow, Dawid; Schröder-Schwarz, Jennifer; Niersch, Jennifer; Brias, Sébastien; Müller, Luisa M; Habermann, Robin; Kretschmer, Paul; Früh, Tristan; Dänekas, Janis; Wehmeyer, Malte H; Poch, Tobias; Sebode, Marcial; Ellinghaus, Eva; Degenhardt, Frauke; Körner, Christian; Hoelzemer, Angelique; Fehse, Boris; Oldhafer, Karl J; Schumacher, Udo; Sauter, Guido; Carrington,Mary; Franke, Andre; Bunders, Madeleine J; Christoph, Schramm; Altfeld, Marcus
  3. Gut. 2023, Oct 03;
  1. 15.   A phase III randomized crossover trial of plerixafor versus G-CSF for treatment of WHIM syndrome
  2. McDermott, David H; Velez, Daniel; Cho, Elena; Cowen, Edward W; DiGiovanna, John J; Pastrana, Diana V; Buck, Christopher B; Calvo, Katherine R; Gardner, Pamela J; Rosenzweig, Sergio D; Stratton, Pamela; Merideth, Melissa A; Kim, H Jeffrey; Brewer, Carmen; Katz, James D; Kuhns,Doug; Malech, Harry L; Follmann, Dean; Fay, Michael P; Murphy, Philip M
  3. The Journal of Clinical Investigation. 2023, Oct 2; 133(19): e164918.
  1. 16.   The SeroNet Clinical and Translational Serology Task Force (CTTF) SARS-CoV-2 mucosal immunity methodological considerations and best practices workshop
  2. Hempel,Heidi; Mantis, Nicholas; Heaney, Christopher D; Pinto,Ligia
  3. Human Vaccines & Immunotherapeutics. 2023, Aug 01; 19(2): 2253598.
  1. 17.   SMYD3 represses tumor-intrinsic interferon response in HPV-negative squamous cell carcinoma of the head and neck
  2. Nigam, Nupur; Bernard, Benjamin; Sevilla, Samantha; Kim, Sohyoung; Dar, Mohd Saleem; Tsai, Daniel; Robbins, Yvette; Burkitt, Kyunghee; Sievers, Cem; Allen, Clint T; Bennett, Richard L; Tettey, Theophilus T; Carter, Benjamin; Rinaldi, Lorenzo; Lingen, Mark W; Sater, Houssein; Edmondson, Elijah F; Moshiri, Arfa; Saeed, Abbas; Cheng, Hui; Luo, Xiaolin; Brennan, Kevin; Koparde, Vishal; Chen, Chen; Das, Sudipto; Andresson,Thorkell; Abdelmaksoud,Abdalla; Murali, Madhavi; Sakata, Seiji; Takeuchi, Kengo; Chari,Raj; Nakamura, Yusuke; Uppaluri, Ravindra; Sunwoo, John B; Van Waes, Carter; Licht, Jonathan D; Hager, Gordon L; Saloura, Vassiliki
  3. Cell Reports. 2023, Jul 17; 42(7): 112823.
  1. 18.   HIV-1 neutralizing antibodies elicited in humans by a prefusion-stabilized envelope trimer form a reproducible class targeting fusion peptide
  2. Wang, Shuishu; Matassoli, Flavio; Zhang, Baoshan; Liu, Tracy; Shen, Chen-Hsiang; Bylund, Tatsiana; Johnston, Timothy; Henry, Amy R; Teng, I-Ting; Tripathi, Prabhanshu; Becker, Jordan E; Changela, Anita; Chaudhary, Ridhi; Cheng, Cheng; Gaudinski, Martin; Gorman, Jason; Harris, Darcy R; Lee, Myungjin; Morano, Nicholas C; Novik, Laura; O'Dell, Sijy; Olia, Adam S; Parchment, Danealle K; Rawi, Reda; Roberts-Torres, Jesmine; Stephens,Tyler; Tsybovsky,Yaroslav; Wang, Danyi; Van Wazer, David J; Zhou, Tongqing; Doria-Rose, Nicole A; Koup, Richard A; Shapiro, Lawrence; Douek, Daniel C; McDermott, Adrian B; Kwong, Peter D
  3. Cell Reports. 2023, Jul 10; 42(7): 112755.
  1. 19.   Tumor eradication by hetIL-15 locoregional therapy correlates with an induced intratumoral CD103intCD11b+ dendritic cell population
  2. Stellas, Dimitris; Karaliota,Sevasti; Stravokefalou, Vasiliki; Angel, Matthew; Nagy,Bethany; Goldfarbmuren,Kate; Bergamaschi, Cristina; Felber,Barbara; Pavlakis,George
  3. Cell Reports. 2023, May 12; 42(5): 112501.
  1. 20.   Experimental bacterial dysbiosis with consequent immune alterations increase intrarectal SIV acquisition susceptibility
  2. Ortiz, Alexandra M; Baker, Phillip J; Langner, Charlotte A; Simpson, Jennifer; Stacy, Apollo; Flynn, Jacob K; Starke, Carly E; Vinton, Carol L; Fennessey,Christine; Belkaid, Yasmine; Keele,Brandon; Brenchley, Jason M
  3. Cell Reports. 2023, Jan 31; 42(1): 112020.
  1. 21.   Double knockin mice show NF-?B trajectories in immune signaling and aging
  2. Rahman, Shah Md Toufiqur; Aqdas, Mohammad; Martin, Erik W; Tomassoni Ardori,Francesco; Songkiatisak, Preeyaporn; Oh, Kyu-Seon; Uderhardt, Stefan; Yun, Sangwon; Claybourne, Quia C; McDevitt, Ross A; Greco, Valentina; Germain, Ronald N; Tessarollo, Lino; Sung, Myong-Hee
  3. Cell Reports. 2022, Nov 22; 41(8): 111682.
  1. 22.   Manganese enhances DNA- or RNA-mediated innate immune response by inducing phosphorylation of TANK-binding kinase 1
  2. Sui, Hongyan; Chen, Qian; Yang, Jun; Srirattanapirom, Selena; Imamichi, Tomozumi
  3. iScience. 2022, Nov 18; 25(11): 105352.
  1. 23.   Human Dectin-1 deficiency impairs macrophage-mediated defense against phaeohyphomycosis
  2. Drummond, Rebecca A; Desai, Jigar V; Hsu, Amy P; Oikonomou, Vasileios; Vinh, Donald C; Acklin, Joshua A; Abers, Michael S; Walkiewicz, Magdalena A; Anzick, Sarah L; Swamydas, Muthulekha; Vautier, Simon; Natarajan, Mukil; Oler, Andrew J; Yamanaka, Daisuke; Mayer-Barber, Katrin D; Iwakura, Yoichiro; Bianchi, David; Driscoll, Brian; Hauck, Ken; Kline, Ahnika; Viall, Nicholas Sp; Zerbe, Christa S; Ferré, Elise Mn; Schmitt, Monica M; DiMaggio, Tom; Pittaluga, Stefania; Butman, John A; Zelazny, Adrian M; Shea, Yvonne R; Arias, Cesar A; Ashbaugh, Cameron; Mahmood, Maryam; Temesgen, Zelalem; Theofiles, Alexander G; Nigo, Masayuki; Moudgal, Varsha; Bloch, Karen C; Kelly, Sean G; Whitworth, M Suzanne; Rao, Ganesh; Whitener, Cindy J; Mafi, Neema; Gea-Banacloche, Juan; Kenyon, Lawrence C; Miller, William R; Boggian, Katia; Gilbert, Andrea; Sincock, Matthew; Freeman, Alexandra F; Bennett, John E; Hasbun, Rodrigo; Mikelis, Constantinos M; Kwon-Chung, Kyung J; Belkaid, Yasmine; Brown, Gordon D; Lim, Jean K; Kuhns,Doug; Holland, Steven M; Lionakis, Michail S
  3. The Journal of Clinical Investigation. 2022, Nov 15; 132(22):
  1. 24.   Artificial Immune Cell, AI-cell, a New Tool to Predict Interferon Production by Peripheral Blood Monocytes in Response to Nucleic Acid Nanoparticles
  2. Chandler, Morgan; Jain, Sankalp; Halman, Justin; Hong, Enping; Dobrovolskaia,Marina; Zakharov, Alexey V; Afonin, Kirill A
  3. Small (Weinheim an der Bergstrasse, Germany). 2022, Oct 10; e2204941.
  1. 25.   Potent monoclonal antibodies neutralize Omicron sublineages and other SARS-CoV-2 variants
  2. Chen, Zhaochun; Zhang, Peng; Matsuoka, Yumiko; Tsybovsky,Yaroslav; West, Kamille; Santos, Celia; Boyd, Lisa F; Nguyen, Hanh; Pomerenke, Anna; Stephens,Tyler; Olia, Adam S; Zhang, Baoshan; De Giorgi, Valeria; Holbrook, Michael R; Gross, Robin; Postnikova, Elena; Garza, Nicole L; Johnson, Reed F; Margulies, David H; Kwong, Peter D; Alter, Harvey J; Buchholz, Ursula J; Lusso, Paolo; Farci, Patrizia
  3. Cell Reports. 2022, Sep 30; 41(5): 111528.
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