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  1. 1.   HIF1a Plays a Crucial Role in the Development of TFE3-Rearranged Renal Cell Carcinoma by Orchestrating a Metabolic Shift Toward Fatty Acid Synthesis
  2. Nishizawa, Hidekazu; Funasaki, Shintaro; Ma, Wenjuan; Kubota, Yoshiaki; Watanabe, Kazuhide; Arima, Yuichiro; Kuroda, Shoichiro; Ito, Takaaki; Furuya, Mitsuko; Motoshima, Takanobu; Nishiyama, Akira; Mehanna, Sally; Satou, Yorifumi; Hasumi, Hisashi; Jikuya, Ryosuke; Makiyama, Kazuhide; Tamura, Tomohiko; Oike, Yuichi; Tanaka, Yasuhito; Suda, Toshio; Schmidt,Laura; Linehan, W Marston; Baba, Masaya; Kamba, Tomomi
  3. Genes to Cells : devoted to molecular & cellular mechanisms. 2025, Jan; 30(1): e13195.
  1. 2.   Repeated horizontal acquisition of lagriamide-producing symbionts in Lagriinae beetles
  2. Uppal, Siddharth; Simonson,Sam Waterworth; Nick, Alina; Vogel, Heiko; Flórez, Laura V; Kaltenpoth, Martin; Kwan, Jason C
  3. The ISME Journal. 2024, Oct 23;
  1. 3.   Nano-mupirocin as tumor-targeted antibiotic: Physicochemical, immunotoxicological and pharmacokinetic characterization, and effect on gut microbiome
  2. Cern, Ahuva; Skoczen,Sarah; Snapp, Kelsie S; Hod, Atara; Zilbersheid, Daniel; Bavli, Yaelle; Alon-Maimon, Tamar; Bachrach, Gilad; Wei, Xiaohui; Berman, Bella; Yassour, Moran; Cedrone,Edward; Neun,Barry; Dobrovolskaia,Marina; Clogston,Jeffrey; Stern,Steve; Barenholz, Yechezkel
  3. Journal of Controlled Release : official journal of the Controlled Release Society. 2024, Aug 2; 373: 713-726.
  1. 4.   Generation and characterization of mature hepatocyte organoids for liver metabolic studies
  2. Liu, Yuchen; Zhou, Yaxing; Ahodantin, James; Jin, Yu; Zhu, Juanjuan; Sun,David; Wu,Xiaolin; Su, Lishan; Yang, Yingzi
  3. Journal of Cell Science. 2024, May 15; 137(10):
  1. 5.   Metabolism-focused CRISPR screen unveils mitochondrial pyruvate carrier 1 as a critical driver for PARP inhibitor resistance in lung cancer
  2. Furusawa, Takashi; Cavero, Renzo; Liu, Yue; Li, Haojian; Xu,Xia; Andresson,Thorkell; Reinhold, William; White, Olivia; Boufraqech, Myriem; Meyer,Thomas; Hartmann, Oliver; Diefenbacher, Markus E; Pommier, Yves; Weyemi, Urbain
  3. Molecular Carcinogenesis. 2024, Feb 27;
  1. 6.   Structural analysis and molecular substrate recognition properties of Arabidopsis thaliana ornithine transcarbamylase, the molecular target of phaseolotoxin produced by Pseudomonas syringae
  2. Nielipinski, Maciej; Pietrzyk-Brzezinska, Agnieszka J; Wlodawer,Alexander; Sekula, Bartosz
  3. Frontiers in Plant Science. 2023, Dec 18; 14: 1297956.
  1. 7.   SERPINB3-MYC axis induces the basal-like/squamous subtype and enhances disease progression in pancreatic cancer
  2. Ohara, Yuuki; Tang, Wei; Liu, Huaitian; Yang, Shouhui; Dorsey, Tiffany H; Cawley, Helen; Moreno, Paloma; Chari,Raj; Guest,Mary; Azizian, Azadeh; Gaedcke, Jochen; Ghadimi, Michael; Hanna, Nader; Ambs, Stefan; Hussain, S Perwez
  3. Cell Reports. 2023, Nov 18; 42(12): 113434.
  1. 8.   Methotrexate-based PROTACs as DHFR-specific chemical probes
  2. Rana, Sandeep; Dranchak, Patricia; Dahlin, Jayme L; Lamy, Laurence; Li,Wenqing; Oliphant, Erin; Shrimp, Jonathan H; Rajacharya, Girish H; Tharakan, Ravi; Holland, David O; Whitten, Apryl S; Wilson, Kelli M; Singh, Pankaj K; Durum,Scott; Tao, Dingyin; Rai, Ganesha; Inglese, James
  3. Cell Chemical Biology. 2023, Oct 17;
  1. 9.   Pan-cancer analysis of post-translational modifications reveals shared patterns of protein regulation
  2. Geffen, Yifat; Anand, Shankara; Akiyama, Yo; Yaron, Tomer M; Song, Yizhe; Johnson, Jared L; Govindan, Akshay; Babur, Özgün; Li, Yize; Huntsman, Emily; Wang, Liang-Bo; Birger, Chet; Heiman, David I; Zhang, Qing; Miller, Mendy; Maruvka, Yosef E; Haradhvala, Nicholas J; Calinawan, Anna; Belkin, Saveliy; Kerelsky, Alexander; Clauser, Karl R; Krug, Karsten; Satpathy, Shankha; Payne, Samuel H; Mani, D R; Gillette, Michael A; Dhanasekaran, Saravana M; Thiagarajan,Mathangi; Mesri, Mehdi; Rodriguez, Henry; Robles, Ana I; Carr, Steven A; Lazar, Alexander J; Aguet, François; Cantley, Lewis C; Ding, Li; Getz, Gad
  3. Cell. 2023, Aug 09;
  1. 10.   Phenotypic plasticity and reduced tissue retention of exhausted tumor-infiltrating T cells following neoadjuvant immunotherapy in head and neck cancer
  2. Sievers, Cem; Craveiro, Marco; Friedman, Jay; Robbins, Yvette; Yang, Xinping; Bai, Ke; Nguyen, Andy; Redman, Jason M; Chari,Raj; Soon-Shiong, Patrick; Schlom, Jeffrey; Gulley, James; Allen, Clint T
  3. Cancer Cell. 2023, Apr 12; 41(5): 887-902.e5.
  1. 11.   Novel Regulators of Macropinocytosis-Dependent Growth Revealed by Informer Set Library Screening in Pancreatic Cancer Cells
  2. Kim, Sang Hoon; Song, Jae Ho; Kim, Min Ji; Song, Mun Gu; Ku, Angel A; Bandyopadhyay, Sourav; McCormick, Frank; Kim, Sung Eun
  3. Metabolites. 2022, Sep 02; 12(9):
  1. 12.   Disruption of the lipolysis pathway results in stem cell death through a sterile immunity-like pathway in adult Drosophila
  2. Aggarwal,Poonam; Liu, Zilun; Cheng, Guang Qian; Singh,Shree Ram; Shi,Chunmei; Chen, Ying; Sun, Ling V; Shi,Chunmei
  3. Cell Reports. 2022, Jun 21; 39(12): 110958.
  1. 13.   Direct anabolic metabolism of three carbon propionate to a six carbon metabolite occurs in vivo across tissues and species
  2. Doan, Mary T; Neinast, Michael D; Varner, Erika L; Bedi, Kenneth; Bartee,David; Jiang, Helen; Trefely, Sophie; Xu, Peining; Singh, Jay P; Jang, Cholsoon; Rame, Eduardo; Brady, Donita; Meier,Jordan; Marguiles, Kenneth; Arany, Zoltan; Snyder, Nathaniel W
  3. Journal of Lipid Research. 2022, May 11; 63(6): 100224.
  1. 14.   Measured body size and serum estrogen metabolism in postmenopausal women: the Ghana Breast Health Study
  2. Geczik, Ashley M; Falk, Roni T; Xu,Xia; Ansong, Daniel; Yarney, Joel; Wiafe-Addai, Beatrice; Edusei, Lawrence; Dedey, Florence; Vanderpuye, Verna; Titiloye, Nicholas; Adjei, Ernest; Aitpillah, Francis; Osei-Bonsu, Ernest; Oppong, Joseph; Biritwum, Richard; Nyarko, Kofi; Wiafe, Seth; Awuah, Baffour; Clegg-Lamptey, Joe-Nat; Ahearn, Thomas U; Figueroa, Jonine; Garcia-Closas, Montserrat; Brinton, Louise A; Trabert, Britton
  3. Breast Cancer Research : BCR. 2022, Jan 26; 24(1):
  1. 15.   Recreational Physical Activity, Sitting, and Androgen Metabolism among Postmenopausal Women in the Women's Health Initiative Observational Study
  2. Oh, Hannah; Saquib, Nazmus; Ochs-Balcom, Heather M.; Pfeiffer, Ruth M.; Richey, Phyllis A.; Shadyab, Aladdin H.; Wild, Robert A.; Underland, Lisa; Anderson, Garnet L.; Xu,Xia; Trabert, Britton
  3. Cancer Epidemiology Biomarkers & Prevention. 2022, Jan; 31(1): 97-107.
  1. 16.   Molecular basis for redox control by the human cystine/glutamate antiporter system xc(-)
  2. Parker, Joanne L.; Deme,Justin; Kolokouris, Dimitrios; Kuteyi, Gabriel; Biggin, Philip C.; Lea,Susan; Newstead, Simon
  3. Nature Communications. 2021, Dec 8; 12(1):
  1. 17.   Editorial
  2. Phang,James
  3. AMINO ACIDS. 2021, Dec; 53(12): 1767-1768.
  1. 18.   Editorial
  2. Phang,James
  3. Amino Acids. 2021, Nov 29; 53: 1767–1768.
  1. 19.   Nitric Oxide Modulates Metabolic Processes in the Tumor Immune Microenvironment
  2. McGinity,Chris; Palmieri,Erika; Somasundaram, Veena; Bhattacharyya,Dana; Ridnour,Lisa; Cheng,Robert; Ryan, Aideen E.; Glynn, Sharon A.; Thomas, Douglas D.; Miranda, Katrina M.; Anderson,Steve; Lockett,Stephen; McVicar,Daniel; Wink,David
  3. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. 2021, Jul; 22(13):
  1. 20.   Plasma Metabolomics Reveals Dysregulated Metabolic Signatures in HIV-Associated Immune Reconstitution Inflammatory Syndrome
  2. Pei, Luxin; Fukutani, Kiyoshi F.; Tiburcio, Rafael; Rupert,Adam; Dahlstrom, Eric W.; Galindo, Frances; Laidlaw, Elizabeth; Lisco, Andrea; Manion, Maura; Andrade, Bruno B.; Sereti, Irini
  3. FRONTIERS IN IMMUNOLOGY. 2021, JUN 15; 12
  1. 21.   Fatty acid oxidation is required for embryonic stem cell survival during metabolic stress
  2. Yan, Hualong; Malik, Navdeep; Kim, Young-Im; He,Yunlong; Li, Mangmang; Dubois, Wendy; Liu, Huaitian; Peat, Tyler J; Nguyen, Joe T; Tseng, Yu-Chou; Ayaz, Gamze; Alzamzami, Waseem; Chan,King; Andresson,Thorkell; Tessarollo,Lino; Mock, Beverly A; Lee, Maxwell P; Huang, Jing
  3. EMBO Reports. 2021, Jun 4; 22(6):
  1. 22.   Optimization of ether and aniline based inhibitors of lactate dehydrogenase
  2. Christov, Plamen P.; Kim, Kwangho; Jana, Somnath; Romaine, Ian M.; Rai, Ganesha; Mott, Bryan T.; Allweil, Alexander A.; Lamers, Alexander; Brimacombe, Kyle R.; Urban, Daniel J.; Lee, Tobie D.; Hu, Xin; Lukacs, Christine M.; Davies, Douglas R.; Jadhav, Ajit; Hall, Matthew D.; Green, Neal; Moore,Bill; Stott,Gordon; Flint,Andrew; Maloney, David J.; Sulikowski, Gary A.; Waterson, Alex G.
  3. Bioorganic & Medicinal Chemistry Letters. 2021, Jun 1; 41: 127974.
  1. 23.   Mitochondrial DNA alterations underlie an irreversible shift to aerobic glycolysis in fumarate hydratase-deficient renal cancer
  2. Crooks, Daniel R.; Maio, Nunziata; Lang, Martin; Ricketts, Christopher J.; Vocke, Cathy D.; Gurram, Sandeep; Turan, Sevilay; Kim, Yun-Young; Cawthon, G. Mariah; Sohelian, Ferri; De Val, Natalia; Pfeiffer, Ruth M.; Jailwala, Parthav; Tandon, Mayank; Tran, Bao; Fan, Teresa W-M; Lane, Andrew N.; Ried, Thomas; Wangsa, Darawalee; Malayeri, Ashkan A.; Merino, Maria J.; Yang, Youfeng; Meier, Jordan L.; Ball, Mark W.; Rouault, Tracey A.; Srinivasan, Ramaprasad; Linehan, W. Marston
  3. Science Signaling. 2021, Jan 5; 14(664):
  1. 24.   Tobacco smoking induces metabolic reprogramming of renal cell carcinoma
  2. Reigle, James; Secic, Dina; Biesiada, Jacek; Wetzel, Collin; Shamsaei, Behrouz; Chu, Johnson; Zang, Yuanwei; Zhang, Xiang; Talbot, Nicholas J; Bischoff, Megan E; Zhang, Yongzhen; Thakar, Charuhas V; Gaitonde, Krishnanath; Sidana, Abhinav; Bui, Hai; Cunningham, John T; Zhang, Qing; Schmidt,Laura; Linehan, W Marston; Medvedovic, Mario; Plas, David R; Landero Figueroa, Julio A; Meller, Jarek; Czyzyk-Krzeska, Maria F
  3. The Journal of Clinical Investigation. 2021, Jan 4; 131(1):
  1. 25.   Editorial: Metabolism Meets Function: Untangling the Cross-Talk Between Signaling and Metabolism
  2. Castegna, Alessandra; McVicar,Daniel; Campanella, Annalisa; Palmieri,Erika; Menga, Alessio; Porporato, Paolo E.
  3. FRONTIERS IN ONCOLOGY. 2020, OCT 20; 10: 607511.
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