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  1. 1.   Dietary therapy of murine primary biliary cholangitis induces hepatocellular steatosis: A cautionary tale
  2. Zhang, Weici; Al Tekreeti, Taha; Leung, Patrick S C; Tsuneyama, Koichi; Dhillon, Harleen; Rojas, Manuel; Heuer, Luke S; Ridgway, William M; Ansari, Aftab A; Young,Howard; Mackay, Charles R; Gershwin, M Eric
  3. Liver International : official journal of the International Association for the Study of the Liver. 2024, Aug 05;
  1. 2.   Evaluation of the Therapeutic Potential of Sulfonyl Urea Derivatives as Soluble Epoxide Hydrolase (sEH) Inhibitors
  2. Kundu, Biswajit; Dvorácskó, Szabolcs; Basu, Abhishek; Pommerolle, Lenny; Kim, Kyu Ah; Wood, Casey M; Gibbs, Eve; Behee, Madeline; Tarasova,Nadya; Cinar, Resat; Iyer, Malliga R
  3. Molecules (Basel, Switzerland). 2024, Jun 26; 29(13):
  1. 3.   The Influence of Preanalytical Biospecimen Handling on the Measurement of B Vitamers, Amino Acids, and Other Metabolites in Blood
  2. Michels, Kara A; Weinstein, Stephanie J; Albert, Paul S; Black, Amanda; Brotzman, Michelle; Diaz-Mayoral,Norma; Gerlanc, Nicole; Huang, Wen-Yi; Sampson, Joshua N; Shreves, Alaina; Ueland, Per Magne; Wyatt, Kathleen; Wentzensen, Nicolas; Abnet, Christian C
  3. Biopreservation and Biobanking. 2023, Jan 09;
  1. 4.   Machine Learning Informs RNA-Binding Chemical Space
  2. Yazdani, Kamyar; Jordan, Deondre; Yang,Mo; Fullenkamp,Chris; Schneekloth,Jay; Calabrese,Dave; Boer, Robert E; Hilimire, Thomas A; Allen, Timothy E H; Khan, Rabia T
  3. Angewandte Chemie (International ed. in English). 2022, Dec 30;
  1. 5.   Synthesis and Evaluation of a Stable Isostere of Malonyllysine
  2. Jing, Yihang; Bergholtz, Sarah E.; Omole, Anthony; Kulkarni, Rhushi A.; Zengeya, Thomas T.; Yoo,Euna; Meier,Jordan
  3. CHEMBIOCHEM. 2021, Nov 5;
  1. 6.   Controlled Organization of Inorganic Materials Using Biological Molecules for Activating Therapeutic Functionalities
  2. Chandler, Morgan; Minevich, Brian; Roark, Brandon; Viard,Mathias; Johnson, M Brittany; Rizvi, Mehedi H; Deaton, Thomas A; Kozlov, Seraphim; Panigaj, Martin; Tracy, Joseph B; Yingling, Yaroslava G; Gang, Oleg; Afonin, Kirill A
  3. ACS applied materials & interfaces. 2021, Aug 25; 13(33): 39030-39041.
  1. 7.   2021: an immunotherapy odyssey and the rise of nucleic acid nanotechnology
  2. Panigaj, Martin; Dobrovolskaia,Marina; Afonin, Kirill A.
  3. NANOMEDICINE. 2021, Jun 24;
  1. 8.   Abundant synthesis of long chain polyunsaturated fatty acids in Eutreptiella sp. (Eugelnozoa) revealed by chromatographic and transcriptomic analyses
  2. Kuo, Rita C; Zhang, Huan; Stuart, James D; Provatas, Anthony A; Hannick, Linda; Lin, Senjie
  3. Journal of Phycology. 2021, Apr;
  1. 9.   Molecular recognition of a branched peptide with HIV-1 Rev Response Element (RRE) RNA
  2. Dai, Yumin; Peralta, Ashley N.; Wynn, Jessica E.; Sherpa,Chringma; Li, Hao; Verma, Astha; Le Grice,Stuart; Santos, Webster L.
  3. Bioorganic & medicinal chemistry. 2019, APR 15; 27(8): 1759-1765.
  1. 10.   Toll-Like Receptor-Mediated Recognition of Nucleic Acid Nanoparticles (NANPs) in Human Primary Blood Cells
  2. Hong, Enping; Halman, Justin R; Shah, Ankit; Cedrone,Edward; Truong, Nguyen; Afonin, Kirill A; Dobrovolskaia,Marina
  3. Molecules (Basel, Switzerland). 2019, Mar 2; 24(6): pii: E1094.
  1. 11.   Discovery of a Branched Peptide That Recognizes the Rev Response Element (RRE) RNA and Blocks HIV-1 Replication
  2. Dai, Yumin; Wynn, Jessica E.; Peralta, Ashley N.; Sherpa,Chringma; Jayaraman, Bhargavi; Li, Hao; Verma, Astha; Frankel, Alan D.; Le Grice,Stuart; Santos, Webster L.
  3. JOURNAL OF MEDICINAL CHEMISTRY. 2018, NOV 8; 61(21): 9611-9620.
  1. 12.   Structural insights into the mechanism of double strand break formation by Hermes, a hAT family eukaryotic DNA transposase
  2. Hickman, Alison B.; Voth, Andrea; Ewis, Hosam; Li, Xianghong; Craig, Nancy L.; Dyda, Fred
  3. NUCLEIC ACIDS RESEARCH. 2018, NOV 2; 46(19): 10286-10301.
  1. 13.   Bioorthogonal pro-metabolites for profiling short chain fatty acylation
  2. Sinclair, Wilson R.; Shrimp, Jonathan; Zengeya, Thomas T.; Kulkarni, Rhushikesh; Garlick, Julie M.; Luecke, Hans; Worth, Andrew J.; Blair, Ian A.; Snyder, Nathaniel W.; Meier, Jordan
  3. Chemical Science. 2018, Feb 07; 9(5): 1236-1241.
  1. 14.   Triggered Formation of Anionic Hydrogels from Self-Assembling Acidic Peptide Amphiphiles
  2. Sinthuvanich, Chomdao; Nagy-Smith, Katelyn J.; Walsh, Scott; Schneider, Joel
  3. Macromolecules. 2017, Aug 08; 50(15): 5643-5651.
  1. 15.   Folding behavior of a T-shaped, ribosome-binding translation enhancer implicated in a wide-spread conformational switch
  2. Le, My-Tra; Kasprzak, Wojciech; Kim, Taejin; Gao, Feng; Young, Megan Y. L.; Yuan, Xuefeng; Shapiro, Bruce; Seog, Joonil; Simon, Anne E.
  3. ELIFE. 2017, Feb 13; 6: e22883.
  1. 16.   Discovery of RNA Binding Small Molecules Using Small Molecule Microarrays
  2. Connelly, Colleen; Abulwerdi, Fardokht; Schneekloth, Jay
  3. Methods in Molecular Biology. 2017 1518: 157-175.
  1. 17.   A Protocol for the Design of Protein and Peptide Nanostructure Self-Assemblies Exploiting Synthetic Amino Acids.
  2. Haspel, Nurit; Zheng, Jie; Aleman, Carlos; Zanuy, David; Nussinov, Ruth
  3. Methods in molecular biology (Clifton, N.J.). 2017 1529: 323-352.
  1. 18.   Design, synthesis, and biological evaluation of water-soluble amino acid prodrug conjugates derived from combretastatin, dihydronaphthalene, and benzosuberene-based parent vascular disrupting agents
  2. Devkota, L.; Lin, C. M.; Strecker, T. E.; Wang, Y.; Tidmore, J. K.; Chen, Z.; Guddneppanavar, R.; Jelinek, C. J.; Lopez, R.; Liu, L.; Hamel, E.; Mason, R. P.; Chaplin, D. J.; Trawick, M. L.; Pinney, K. G.
  3. Bioorganic & Medicinal Chemistry. 2016, 1-Mar; 24(5): 938-56.
  1. 19.   Quantitation of Multiple Sphingolipid Classes Using Normal and Reversed-Phase LC-ESI-MS/MS: Comparative Profiling of Two Cell Lines
  2. Masood, M. A.; Rao, R. P.; Acharya, J. K.; Blonder, J.; Veenstra, T. D.
  3. Lipids. 2012, Feb; 47(2): 209-226.
  1. 20.   Modifications of Glycans: Biological Significance and Therapeutic Opportunities
  2. Muthana, S. M.; Campbell, C. T.; Gildersleeve, J. C.
  3. Acs Chemical Biology. 2012, Jan; 7(1): 31-43.
  1. 21.   Novel Substrate-Based Inhibitors of Human Glutamate Carboxypeptidase II with Enhanced Lipophilicity
  2. Plechanovova, A.; Byun, Y.; Alquicer, G.; Skultetyova, L.; Mlcochova, P.; Nemcova, A.; Kim, H. J.; Navratil, M.; Mease, R.; Lubkowski, J.; Pomper, M.; Konvalinka, J.; Rulisek, L.; Barinka, C.
  3. Journal of Medicinal Chemistry. 2011, Nov; 54(21): 7535-7546.
  1. 22.   Fifty Years of Diazeniumdiolate Research. From Laboratory Curiosity to Broad-Spectrum Biomedical Advances
  2. Keefer, L. K.
  3. Acs Chemical Biology. 2011, Nov; 6(11): 1147-1155.
  1. 23.   Exploring the energy landscape of a molecular engineered analog of a tumor-homing peptide
  2. Revilla-Lopez, G.; Torras, J.; Nussinov, R.; Aleman, C.; Zanuy, D.
  3. Physical Chemistry Chemical Physics. 2011, Jun 7; 13(21): 9986-9994.
  1. 24.   Integrating the intrinsic conformational preferences of noncoded alpha-amino acids modified at the peptide bond into the Noncoded Amino acids Database
  2. Revilla-Lopez, G.; Rodriguez-Ropero, F.; Curco, D.; Torras, J.; Calaza, M. I.; Zanuy, D.; Jimenez, A. I.; Cativiela, C.; Nussinov, R.; Aleman, C.
  3. Proteins-Structure Function and Bioinformatics. 2011, Jun; 79(6): 1841-1852.
  1. 25.   The Role of Response Elements Organization in Transcription Factor Selectivity: The IFN-beta Enhanceosome Example
  2. Pan, Y. P.; Nussinov, R.
  3. Plos Computational Biology. 2011, Jun; 7(6): 14.
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