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  1. 1.   Structural insights into the mechanism of double strand break formation by Hermes, a hAT family eukaryotic DNA transposase
  2. Hickman, Alison B.; Voth, Andrea; Ewis, Hosam; Li, Xianghong; Craig, Nancy L.; Dyda, Fred
  3. NUCLEIC ACIDS RESEARCH. 2018, NOV 2; 46(19): 10286-10301.
  1. 2.   Triggered Formation of Anionic Hydrogels from Self-Assembling Acidic Peptide Amphiphiles
  2. Sinthuvanich, Chomdao; Nagy-Smith, Katelyn J.; Walsh, Scott; Schneider, Joel
  3. Macromolecules. 2017, Aug 08; 50(15): 5643-5651.
  1. 3.   Exploring the energy landscape of a molecular engineered analog of a tumor-homing peptide
  2. Revilla-Lopez, G.; Torras, J.; Nussinov, R.; Aleman, C.; Zanuy, D.
  3. Physical Chemistry Chemical Physics. 2011, Jun 7; 13(21): 9986-9994.
  1. 4.   Optimization of a Cyclic Peptide Inhibitor of Ser/Thr Phosphatase PPM1D (Wip1)
  2. Hayashi, R.; Tanoue, K.; Durell, S. R.; Chatterjee, D. K.; Jenkins, L. M. M.; Appella, D. H.; Appella, E.
  3. Biochemistry. 2011, May; 50(21): 4537-4549.
  1. 5.   Enhanced Stereoselectivity of a Cu(II) Complex Chiral Auxiliary in the Synthesis of Fmoc-L-gamma-carboxyglutamic Acid
  2. Smith, D. J.; Yap, G. P. A.; Kelley, J. A.; Schneider, J. P.
  3. Journal of Organic Chemistry. 2011, Mar; 76(6): 1513-1520.
  1. 6.   Zinc-Triggered Hydrogelation of a Self-Assembling beta-Hairpin Peptide
  2. Micklitsch, C. M.; Knerr, P. J.; Branco, M. C.; Nagarkar, R.; Pochan, D. J.; Schneider, J. P.
  3. Angewandte Chemie-International Edition. 2011, Feb 11; 50(7): 1577-1579.
  1. 7.   Structure-Activity Studies on Antiproliferative Factor (APF) Glycooctapeptide Derivatives
  2. Kaczmarek, P.; Tocci, G. M.; Keay, S. K.; Adams, K. M.; Zhang, C. O.; Koch, K. R.; Grkovic, D.; Guo, L.; Michejda, C. J.; Barchi, J. J.
  3. Acs Medicinal Chemistry Letters. 2010, Nov; 1(8): 390-394.
  1. 8.   Antimicrobial Protegrin-1 Forms Ion Channels: Molecular Dynamic Simulation, Atomic Force Microscopy, and Electrical Conductance Studies
  2. Capone, R.; Mustata, M.; Jang, H.; Arce, F. T.; Nussinov, R.; Lal, R.
  3. Biophysical Journal. 2010, Jun; 98(11): 2644-2652.
  1. 9.   Iterative Structure-Based Peptide-Like Inhibitor Design against the Botulinum Neurotoxin Serotype A
  2. Zuniga, J. E.; Hammill, J. T.; Drory, O.; Nuss, J. E.; Burnett, J. C.; Gussio, R.; Wipf, P.; Bavari, S.; Brunger, A. T.
  3. Plos One. 2010, Jun; 5(6): 15.
  1. 10.   [Gd@C-82(OH)(22)](n) Nanoparticles Induce Dendritic Cell Maturation and Activate Th1 Immune Responses
  2. Yang, D.; Zhao, Y. L.; Guo, H.; Li, Y. N.; Tewary, P.; Xing, G. M.; Hou, W.; Oppenheim, J. J.; Zhang, N.
  3. Acs Nano. 2010, Feb; 4(2): 1178-1186.
  1. 11.   Conformational Preferences of 1-Amino-2-phenylcyclohexanecarboxylic Acid, a Phenylalanine Cyclohexane Analogue
  2. Aleman, C.; Jimenez, A. I.; Cativiela, C.; Nussinov, R.; Casanovas, J.
  3. Journal of Organic Chemistry. 2009 74(20): 7834-7843.
  1. 12.   HIV-1 Reverse Transcriptase Can Simultaneously Engage Its DNA/RNA Substrate at Both DNA Polymerase and RNase H Active Sites: Implications for RNase H Inhibition
  2. Beilhartz, G. L.; Wendeler, M.; Baichoo, N.; Rausch, J.; Le Grice, S.; Gotte, M.
  3. Journal of Molecular Biology. 2009 388(3): 462-474.
  1. 13.   Comprehensive resequence analysis of a 97 kb region of chromosome 10q11.2 containing the MSMB gene associated with prostate cancer
  2. Yeager, M.; Deng, Z. M.; Boland, J.; Matthews, C.; Bacior, J.; Lonsberry, V.; Hutchinson, A.; Burdett, L. A.; Qi, L. Q.; Jacobs, K. B.; Gonzalez-Bosquet, J.; Berndt, S. I.; Hayes, R. B.; Hoover, R. N.; Thomas, G.; Hunter, D. J.; Dean, M.; Chanock, S.
  3. Human Genetics. 2009 126(6): 743-750.
  1. 14.   Multiple loci identified in a genome-wide association study of prostate cancer
  2. Thomas, G.; Jacobs, K. B.; Yeager, M.; Kraft, P.; Wacholder, S.; Orr, N.; Yu, K.; Chatterjee, N.; Welch, R.; Hutchinson, A.; Crenshaw, A.; Cancel-Tassin, G.; Staats, B. J.; Wang, Z.; Gonzalez-Bosquet, J.; Fang, J.; Deng, X.; Berndt, S. I.; Calle, E.
  3. Nature Genetics. 2008, Mar; 40(3): 310-315.
  1. 15.   Second-generation aspirin and indomethacin prodrugs possessing an O-2-(Acetoxymethyl)-1-(2-carboxypyrrolidin-1-yl)diazenium-1,2-diolate nitric oxide donor moiety: Design, synthesis, biological evaluation, and nitric oxide release studies
  2. Velazquez, C. A.; Chen, Q. H.; Citro, M. L.; Keefer, L. K.; Knaus, E. E.
  3. Journal of Medicinal Chemistry. 2008 51(6): 1954-1961.
  1. 16.   Vinylogous Ureas as a Novel Class of Inhibitors of Reverse Transcriptase-Associated Ribonuclease H Activity
  2. Wendeler, M.; Lee, H. F.; Bermingham, A.; Miller, J. T.; Chertov, O.; Bona, M. K.; Baichoo, N. S.; Ehteshami, M.; Beutler, J.; O'Keefe, B. R.; Gotte, M.; Kvaratskhelia, M.; Le Grice, S.
  3. Acs Chemical Biology. 2008 3(10): 635-644.
  1. 17.   1-amino-2-phenylcyclopentane-1-carboxylic acid: A conformationally restricted phenylalanine analogue
  2. Casanovas, J.; Jimenez, A. I.; Cativiela, C.; Nussinov, R.; Aleman, C.
  3. Journal of Organic Chemistry. 2008 73(2): 644-651.
  1. 18.   Conformational Preferences of beta- and gamma-Aminated Proline Analogues
  2. Flores-Ortega, A.; Casanovas, J.; Nussinov, R.; Aleman, C.
  3. Journal of Physical Chemistry B. 2008 112(44): 14045-14055.
  1. 19.   Stability of tubular structures based on beta-helical proteins: Self-assembled versus polymerized nanoconstructs and wild-type versus mutated sequences
  2. Zanuy, D.; Rodriguez-Ropero, F.; Haspel, N.; Zheng, J.; Nussinov, R.; Aleman, C.
  3. Biomacromolecules. 2007, Oct; 8(10): 3135-3146.
  1. 20.   Coarse-grained representation of beta-helical protein building blocks
  2. Curco, D.; Nussinov, R.; Aleman, C.
  3. Journal of Physical Chemistry B. 2007, Sep; 111(35): 10538-10549.
  1. 21.   Preparation of orthogonally-protected 3-methoxy-4-phosphonomethyl-L-phenylalanine, a new reagent for the synthesis of phosphotyrosyl mimetic-containing peptides
  2. Choi, W. J.; Xang, S. U.; Burke, T. R.
  3. Letters in Organic Chemistry. 2007, Sep; 4(6): 433-439.
  1. 22.   Selection of mutations in the connection and RNase H domains of human immunodeficiency virus type 1 reverse transcriptase that increase resistance to 3 '-azido-3 '-dideoxythymidine
  2. Brehm, J. H.; Koontz, D.; Meteer, J. D.; Pathak, V.; Sluis-Cremer, N.; Mellors, J. W.
  3. Journal of Virology. 2007, Aug; 81(15): 7852-7859.
  1. 23.   Toward understanding the cationicity of defensins - Arg and Lys versus their noncoded analogs
  2. Zou, G. Z.; de Leeuw, E.; Li, C.; Pazgier, M.; Li, C. Q.; Zeng, P. Y.; Lu, W. Y.; Lubkowski, J.; Lu, W. Y.
  3. Journal of Biological Chemistry. 2007, Jul; 282(27): 19653-19665.
  1. 24.   Conformations of proline analogues having double bonds in the ring
  2. Flores-Ortega, A.; Casanovas, J.; Zanuy, D.; Nussinov, R.; Aleman, C.
  3. Journal of Physical Chemistry B. 2007, May; 111(19): 5475-5482.
  1. 25.   Intrinsic conformational characteristics of alpha,alpha-diphenylglycine
  2. Casanovas, J.; Zanuy, D.; Nussinov, R.; Aleman, C.
  3. Journal of Organic Chemistry. 2007, Mar; 72(6): 2174-2181.
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