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  1. 1.   IFN-?/IL-2 Double-Color FluoroSpot Assay for Monitoring Human Primary T Cell Activation: Validation, Inter-Laboratory Comparison, and Recommendations for Clinical Studies
  2. Mauthe, Alexandra; Cedrone,Edward; Villar-Hernández, Raquel; Rusch, Elisa; Springer, Marco; Schuster, Martin; Preyer, Rosemarie; Dobrovolskaia,Marina; Gutekunst, Matthias
  3. The AAPS Journal. 2025, Apr 25; 27(4): 81.
  1. 2.   CR1 variants contribute to FSGS susceptibility across multiple populations
  2. Skitchenko, Rostislav; Modrusan, Zora; Loboda, Alexander; Kopp, Jeffrey B; Winkler,Cheryl; Sergushichev, Alexey; Gupta, Namrata; Stevens, Christine; Daly, Mark J; Shaw, Andrey; Artomov, Mykyta
  3. iScience. 2025, Apr 18; 28(4): 112234.
  1. 3.   ShiftScan: A tool for rapid analysis of high-throughput differential scanning fluorimetry data and compound prioritization
  2. Waterworth, Samantha C; Shenoy, Shilpa R; Sharma, Nirmala D; Wolcott,Chris; Donohue,Duncan; O'Keefe,Barry; Beutler,John
  3. Protein Science : a publication of the Protein Society. 2025, Mar; 34(3): e70055.
  1. 4.   The association between single-nucleotide polymorphisms within type 1 interferon pathway genes and human immunodeficiency virus type 1 viral load in antiretroviral-naïve participants
  2. Mørup, Sara Bohnstedt; Leung, Preston; Reilly, Cavan; Sherman,Brad; Chang,Weizhong; Milojevic, Maja; Milinkovic, Ana; Liappis, Angelike; Borgwardt, Line; Petoumenos, Kathy; Paredes, Roger; Mistry, Shweta S; MacPherson, Cameron R; Lundgren, Jens; Helleberg, Marie; Reekie, Joanne; Murray, Daniel D
  3. AIDS Research and Therapy. 2024, May 03; 21(1): 27.
  1. 5.   Novel subtypes of severe COVID-19 respiratory failure based on biological heterogeneity: a secondary analysis of a randomized controlled trial
  2. Alipanah-Lechner, Narges; Hurst-Hopf, James; Delucchi, Kevin; Swigart, Lamorna; Willmore, Andrew; LaCombe, Benjamin; Dewar,Robin; Lane, H Clifford; Lallemand, Perrine; Liu, Kathleen D; Esserman, Laura; Matthay, Michael A; Calfee, Carolyn S
  3. Critical Care (London, England). 2024, Feb 21; 28(1): 56.
  1. 6.   Multi-omic profiling of follicular lymphoma reveals changes in tissue architecture and enhanced stromal remodeling in high-risk patients
  2. Radtke, Andrea J; Postovalova, Ekaterina; Varlamova, Arina; Bagaev, Alexander; Sorokina, Maria; Kudryashova, Olga; Meerson, Mark; Polyakova, Margarita; Galkin, Ilia; Svekolkin, Viktor; Isaev, Sergey; Wiebe, Daniil; Sharun, Anna; Sarachakov, Alexander; Perelman, Grigory; Lozinsky, Yaroslav; Yaniv, Ziv; Lowekamp, Bradley C; Speranza, Emily; Yao, Li; Pittaluga, Stefania; Shaffer, Arthur L; Jonigk, Danny; Phelan, James D; Davies-Hill, Theresa; Huang, Da Wei; Ovcharov, Pavel; Nomie, Krystle; Nuzhdina, Ekaterina; Kotlov, Nikita; Ataullakhanov, Ravshan; Fowler, Nathan; Kelly,Michael; Muppidi, Jagan; Davis, Jeremy L; Hernandez, Jonathan M; Wilson, Wyndham H; Jaffe, Elaine S; Staudt, Louis M; Roschewski, Mark; Germain, Ronald N
  3. Cancer Cell. 2024, Feb 21; 42
  1. 7.   Quantitation of Active Pharmaceutical Ingredients in Polymeric Drug Products Using Elemental Analysis
  2. Xu,Jie; Hu, Yingwen; Clogston,Jeffrey
  3. Methods in Molecular Biology (Clifton, N.J.). 2024 2789: 35-43.
  1. 8.   Clinical and molecular characterization of children and adults with respiratory bocavirus infection in Mexico: a cross-sectional nested study within the ILI002 prospective observational study
  2. Gamiño-Arroyo, Ana Estela; Arellano-Galindo, José; Del Carmen Guerra-de-Blas, Paola; Ortega-Villa, Ana M; Mateja,Allyson; Llamosas-Gallardo, Beatriz; Ortíz-Hernández, Ana A; Valdéz-Vázquez, Rafael; Ramírez-Venegas, Alejandra; Galindo-Fraga, Arturo; Guerrero, Ma Lourdes; Ramos-Cervantes, Pilar; Mendoza-Garcés, Luis; González-Matus, Mónica; Marroquín-Rojas, Carmen; Xicohtencatl-Cortes, Juan; Ochoa, Sara A; Cruz-Córdova, Ariadna; Powers,John; Ruiz-Palacios, Guillermo Miguel; Beigel, John; Moreno-Espinosa, Sarbelio
  3. Lancet Regional Health. Americas. 2024, Jan; 29: 100647.
  1. 9.   Viral escape mutations do not account for non-protection from SIVmac239 challenge in RhCMV/SIV vaccinated rhesus macaques
  2. Bimber, Benjamin N; Sunshine, Justine; McElfresh, G W; Reed, Jason S; Pathak, Reese; Bateman, Katherine B; Hughes, Colette M; Gilbride, Roxanne M; Ford, Julia C; Morrow, David; Lifson,Jeffrey; Sacha, Jonah B; Hansen, Scott G; Picker, Louis J
  3. Frontiers in Immunology. 2024 15: 1444621.
  1. 10.   Gene network landscape of mouse splenocytes reveals integrin complex as the A151 ODN-responsive hub molecule in the immune transcriptome
  2. Yazar, Volkan; Yilmaz, Ismail Cem; Bulbul, Artun; Klinman, Dennis M; Gursel, Ihsan
  3. Molecular Therapy. Nucleic Acids. 2023, Mar 14; 31: 553-565.
  1. 11.   Longitudinal association between executive function and academic achievement in children with neurofibromatosis type 1 and plexiform neurofibromas
  2. Hou, Yang; Wu, Xian; Allen, Taryn; Tamula,Mary Anne; Martin, Staci; Gillespie, Andy; Goodwin, Anne; Widemann, Brigitte C; Wolters, Pamela L
  3. Journal of the International Neuropsychological Society : JINS. 2023, Feb 08; 1-11.
  1. 12.   Insights into HIV-1 Transmission Dynamics Using Routinely Collected Data in the Mid-Atlantic United States
  2. Kassaye, Seble G; Grossman, Zehava; Vengurlekar, Priyanka; Chai, William; Wallace, Megan; Rhee, Soo-Yon; Meyer, William A; Kaufman, Harvey W; Castel, Amanda; Jordan, Jeanne; Crandall, Keith A; Kang, Alisa; Kumar, Princy; Katzenstein, David A; Shafer, Robert W; Maldarelli,Frank
  3. Viruses. 2022, Dec 25; 15(1):
  1. 13.   Feline Leukemia Virus Frequently Spills Over from Domestic Cats to North American Pumas
  2. Petch, Raegan J; Gagne, Roderick B; Chiu, Elliott; Mankowski, Clara; Rudd, Jaime; Roelke-Parker,Melody; Vickers, T Winston; Logan, Kenneth A; Alldredge, Mathew; Clifford, Deana; Cunningham, Mark W; Onorato, Dave; VandeWoude, Sue
  3. Journal of Virology. 2022, Dec 14; 96(23): e0120122.
  1. 14.   An in vitro and computational validation of a novel loss-of-functional mutation in PAX9 associated with non-syndromic tooth agenesis
  2. Sarkar,Tanmoy; Ranjan, Prashant; Kanathur, Smitha; Gupta, Ankush; Das, Parimal
  3. Molecular Genetics and Genomics : MGG. 2022, Nov 14;
  1. 15.   Neoplastic cell enrichment of tumor tissues using coring and laser microdissection for proteomic and genomic analyses of pancreatic ductal adenocarcinoma
  2. Li, Qing Kay; Hu, Yingwei; Chen, Lijun; Schnaubelt, Michael; Cui Zhou, Daniel; Li, Yize; Lu, Rita Jui-Hsien; Thiagarajan,Mathangi; Hostetter, Galen; Newton, Chelsea J; Jewell, Scott D; Omenn, Gil; Robles, Ana I; Mesri, Mehdi; Bathe, Oliver F; Zhang, Bing; Ding, Li; Hruban, Ralph H; Chan, Daniel W; Zhang, Hui
  3. Clinical proteomics. 2022, Oct 20; 19(1): 36.
  1. 16.   Study of Ren, RexA, and RexB Functions Provides Insight Into the Complex Interaction Between Bacteriophage ? and Its Host, Escherichia coli
  2. Thomason,Lynn; Court,Don
  3. PHAGE (New Rochelle, N.Y.). 2022, Sep 01; 3(3): 153-164.
  1. 17.   The interaction of spongistatin 1 with tubulin
  2. Bai,Ruoli; Smith, Amos B; Pettit, George R; Hamel,Ernest
  3. Archives of Biochemistry and Biophysics. 2022, May 17; 109296.
  1. 18.   A phenotypic signature that identifies neoantigen-reactive T cells in fresh human lung cancers
  2. Hanada, Ken-Ichi; Zhao, Chihao; Gil-Hoyos, Raul; Gartner, Jared J; Chow-Parmer, Christopher; Lowery, Frank J; Krishna, Sri; Prickett, Todd D; Kivitz, Scott; Parkhurst, Maria R; Wong,Nathan; Rae, Zachary; Kelly, Michael C; Goff, Stephanie L; Robbins, Paul F; Rosenberg, Steven A; Yang, James C
  3. Cancer Cell. 2022, Apr 13;
  1. 19.   A germline 1;3 translocation disrupting the VHL gene: a novel genetic cause for von Hippel-Lindau
  2. Ricketts, Christopher J; Vocke, Cathy D; Lang, Martin; Chen,Jack; Zhao,Yongmei; Tran,Bao; Tandon, Mayank; Schmidt, Laura S; Ball, Mark W; Linehan, W Marston
  3. Journal of Medical Genetics. 2022, Jan; 59(1): 18-22.
  1. 20.   Integration of adeno-associated virus (AAV) into the genomes of most Thai and Mongolian liver cancer patients does not induce oncogenesis
  2. Schaffer, Alejandro A.; Dominguez, Dana A.; Chapman, Lesley M.; Gertz, E. Michael; Budhu, Anuradha; Forgues, Marshonna; Chaisaingmongkol, Jittiporn; Rabibhadana, Siritida; Pupacdi, Benjarath; Wu,Xiaolin; Bayarsaikhan, Enkhjargal; Harris, Curtis C.; Ruchirawat, Mathuros; Ruppin, Eytan; Wang, Xin Wei
  3. BMC GENOMICS. 2021, Nov 11; 22(1):
  1. 21.   A 584 bp deletion in CTRB2 inhibits chymotrypsin B2 activity and secretion and confers risk of pancreatic cancer
  2. Jermusyk, Ashley; Zhong, Jun; Connelly, Katelyn E.; Gordon, Naomi; Perera, Sumeth; Abdolalizadeh, Ehssan; Zhang, Tongwu; O'Brien, Aidan; Hoskins, Jason W.; Collins, Irene; Eiser, Daina; Yuan, Chen; Risch, Harvey A.; Jacobs, Eric J.; Li, Donghui; Du, Mengmeng; Stolzenberg-Solomon, Rachael Z.; Klein, Alison P.; Smith, Jill P.; Wolpin, Brian M.; Chanock, Stephen J.; Shi, Jianxin; Petersen, Gloria M.; Westlake,Christopher; Amundadottir, Laufey T.
  3. American Journal of Human Genetics. 2021, Oct 7; 108(10): 1852-1865.
  1. 22.   Genomic and evolutionary classification of lung cancer in never smokers
  2. Zhang, Tongwu; Joubert, Philippe; Ansari-Pour, Naser; Zhao, Wei; Hoang, Phuc H.; Lokanga, Rachel; Moye, Aaron L.; Rosenbaum, Jennifer; Gonzalez-Perez, Abel; Martinez-Jimenez, Francisco; Castro, Andrea; Muscarella, Lucia Anna; Hofman, Paul; Consonni, Dario; Pesatori, Angela C.; Kebede, Michael; Li, Mengying; Rothberg, Bonnie E. Gould; Peneva, Iliana; Schabath, Matthew B.; Poeta, Maria Luana; Costantini, Manuela; Hirsch, Daniela; Heselmeyer-Haddad, Kerstin; Hutchinson,Amy; Olanich, Mary; Lawrence,Scott; Lenz,Petra; Duggan, Maire; Bhawsar, Praphulla M. S.; Sang, Jian; Kim, Jung; Mendoza, Laura; Saini, Natalie; Klimczak, Leszek J.; Islam, S. M. Ashiqul; Otlu, Burcak; Khandekar, Azhar; Cole,Nathan; Stewart, Douglas R.; Choi, Jiyeon; Brown, Kevin M.; Caporaso, Neil E.; Wilson, Samuel H.; Pommier, Yves; Lan, Qing; Rothman, Nathaniel; Almeida, Jonas S.; Carter, Hannah; Ried, Thomas; Kim, Carla F.; Lopez-Bigas, Nuria; Garcia-Closas, Montserrat; Shi, Jianxin; Bosse, Yohan; Zhu, Bin; Gordenin, Dmitry A.; Alexandrov, Ludmil B.; Chanock, Stephen J.; Wedge, David C.; Landi, Maria Teresa
  3. Nature genetics. 2021, Sep; 53(9): 1348-1359.
  1. 23.   Source identification of HIV-1 transmission in three lawsuits Using Ultra-Deep pyrosequencing and phylogenetic analysis
  2. Li, Wei-You; Huang,Szu-Wei; Wang, Sheng-Fan; Liu, Hsin-Fu; Chou, Chih-Hung; Wu, Shang-Jung; Huang, Hsien-Da; Lu, Po-Liang; Fann, Cathy S J; Chen, Marcelo; Chen, Yen-Hsu; Chen, Yi-Ming Arthur
  3. Journal of microbiology, immunology, and infection = Wei mian yu gan ran za zhi. 2021, Aug; 54(4): 596-605.
  1. 24.   Thermotropic effects of PEGylated lipids on the stability of HPPH-encapsulated lipid nanoparticles (LNP)
  2. Kalyanram, Poornima; Puri,Anu; Gupta, Anju
  3. Journal of thermal analysis and calorimetry. 2021, Jun 26; 1-12.
  1. 25.   Inhibition of the DNA damage response phosphatase PPM1D reprograms neutrophils to enhance anti-tumor immune responses
  2. Uyanik, Burhan; Goloudina, Anastasia R.; Akbarali, Aamir; Grigorash, Bogdan B.; Petukhov, Alexey V.; Singhal, Sunil; Eruslanov, Evgeniy; Chaloyard, Jeanne; Lagorgette, Lisa; Hadi, Tarik; Baidyuk, Ekaterina V.; Sakai, Hiroyasu; Tessarollo,Lino; Ryffel, Bernhard; Mazur, Sharlyn J.; Lirussi, Frederic; Garrido, Carmen; Appella, Ettore; Demidov, Oleg N.
  3. NATURE COMMUNICATIONS. 2021, Jun 15; 12(1):
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