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  1. 1.   A Flexible Bayesian Model for Studying Gene-Environment Interaction
  2. Yu, K.; Wacholder, S.; Wheeler, W.; Wang, Z. M.; Caporaso, N.; Landi, M. T.; Liang, F. M.
  3. Plos Genetics. 2012, Jan; 8(1):
  1. 2.   Coordinate linkage of HIV evolution reveals regions of immunological vulnerability
  2. Dahirel, V.; Shekhar, K.; Pereyra, F.; Miura, T.; Artyomov, M.; Talsania, S.; Allen, T. M.; Altfeld, M.; Carrington, M.; Irvine, D. J.; Walker, B. D.; Chakraborty, A. K.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2011, Jul; 108(28): 11530-11535.
  1. 3.   Prevalence in the United States of Selected Candidate Gene Variants
  2. Chang, M. H.; Lindegren, M. L.; Butler, M. A.; Chanock, S. J.; Dowling, N. F.; Gallagher, M.; Moonesinghe, R.; Moore, C. A.; Ned, R. M.; Reichler, M. R.; Sanders, C. L.; Welch, R.; Yesupriya, A.; Khoury, M. J.
  3. American Journal of Epidemiology. 2009 169(1): 54-66.
  1. 4.   The Evolutionary Dynamics of the Lion Panthera leo Revealed by Host and Viral Population Genomics
  2. Antunes, A.; Troyer, J. L.; Roelke, M. E.; Pecon-Slattery, J.; Packer, C.; Winterbach, C.; Winterbach, H.; Hemson, G.; Frank, L.; Stander, P.; Siefert, L.; Driciru, M.; Funston, P. J.; Alexander, K. A.; Prager, K. C.; Mills, G.; Wildt, D.; Bush, M.
  3. Plos Genetics. 2008 4(11):
  1. 5.   Short communication: Composition of milk protein and milk fatty acids is stable for cows differing in genetic merit for milk production
  2. Bobe, G.; Lindberg, G. L.; Freeman, A. E.; Beitz, D. C.
  3. Journal of Dairy Science. 2007, Aug; 90(8): 3955-3960.
  1. 6.   ISHAPE: new rapid and accurate software for haplotyping
  2. Delaneau, O.; Coulonges, C.; Boelle, P. Y.; Nelson, G.; Spadoni, J. L.; Zagury, J. F.
  3. Bmc Bioinformatics. 2007, Jun; 8
  1. 7.   Understanding antibody-antigen associations by molecular dynamics simulations: Detection of important intra- and inter-molecular salt bridges
  2. Sinha, N.; Li, Y. L.; Lipschultz, C. A.; Smith-Gill, S. J.
  3. Cell Biochemistry and Biophysics. 2007 47(3): 361-375.
  1. 8.   HLA polymorphisms in African Americans with idiopathic inflammatory myopathy - Allelic profiles distinguish patients with different clinical phenotypes and myositis autoantibodies
  2. O'Hanlon, T. P.; Rider, L. G.; Mamyrova, G.; Targoff, I. N.; Arnett, F. C.; Reveille, J. D.; Carrington, M.; Gao, X. J.; Oddis, C. V.; Morel, P. A.; Malley, J. D.; Malley, K.; Shamim, E. A.; Chanock, S. J.; Foster, C. B.; Bunch, T.; Reed, A. M.; Love, L. A.; Miller, F. W.
  3. Arthritis and Rheumatism. 2006, Nov; 54(11): 3670-3681.
  1. 9.   A variant of the gene encoding leukotriene A4 hydrolase confers ethnicity-specific risk of myocardial infarction
  2. Helgadottir, A.; Manolescu, A.; Helgason, A.; Thorleifsson, G.; Thorsteinsdottir, U.; Gudbjartsson, D. F.; Gretarsdottir, S.; Magnusson, K. P.; Gudmundsson, G.; Hicks, A.; Jonsson, T.; Grant, S. F. A.; Sainz, J.; O'Brien, S. J.; Sveinbjornsdottir, S.; Valdimarsson, E. M.; Matthiasson, S. E.; Levey, A. I.; Abramson, J. L.; Reilly, M. P.; Vaccarino, V.; Wolfe, M. L.; Gudnason, V.; Quyyumi, A. A.; Topol, E. J.; Rader, D. J.; Thorgeirsson, G.; Gulcher, J. R.; Hakonarson, H.; Kong, A.; Stefansson, K.
  3. Nature Genetics. 2006, Jan; 38(1): 68-74.
  1. 10.   Risk for HIV-1 infection associated with a common CXCL12 (SDF1) polymorphism and CXCR4 variation in an African population
  2. Petersen, D. C.; Glashoff, R. H.; Shrestha, S.; Bergeron, J.; Laten, A.; Gold, B.; van Rensburg, E. J.; Dean, M.; Hayes, V. M.
  3. Jaids-Journal of Acquired Immune Deficiency Syndromes. 2005, DEC 15; 40(5): 521-526.
  1. 11.   Haplotype analysis of the SDF-1 (CXCL12) gene in a longitudinal HIV-1/AIDS cohort study
  2. Modi, W. S.; Scott, K.; Goedert, J. J.; Vlahov, D.; Buchbinder, S.; Detels, R.; Donfield, S.; O'Brien, S. J.; Winkler, C.
  3. Genes and Immunity. 2005, DEC; 6(8): 691-698.
  1. 12.   Combinatorial docking approach for structure prediction of large proteins and multi-molecular assemblies
  2. Inbar, Y.; Benyamini, H.; Nussinov, R.; Wolfson, H. J.
  3. Physical Biology. 2005, DEC; 2(4, Sp. Iss.): S156-S165.
  1. 13.   Variation of the killer cell immunoglobulin-like receptors and HLA-C genes in nasopharyngeal carcinoma
  2. Kovacic, M. B.; Martin, M.; Gao, X. J.; Fuksenko, T.; Chen, C. J.; Cheng, Y. J.; Chen, J. Y.; Apple, R.; Hildesheim, A.; Carrington, M.
  3. Cancer Epidemiology Biomarkers & Prevention. 2005, NOV; 14(11, Part 1): 2673-2677.
  1. 14.   Allellic variants in regulatory regions of cyclooxygenase-2: association with advanced colorectal adenoma
  2. Ali, I. U.; Luke, B. T.; Dean, M.; Greenwald, P.
  3. British Journal of Cancer. 2005, OCT 17; 93(8): 953-959.
  1. 15.   Effect of common CYP3A4 and CYP3A5 variants on the pharmacokinetics of the cytochrome P450 3A phenotyping probe midazolam in cancer patients
  2. Lepper, E. R.; Baker, S. D.; Permenter, M.; Ries, N.; van Schaik, R. H. N.; Schenk, P. W.; Price, D. K.; Ahn, D.; Smith, N. F.; Cusatis, G.; Ingersoll, R. G.; Bates, S. E.; Mathijssen, R. H. J.; Verweij, J.; Figg, W. D.; Sparreboom, A.
  3. Clinical Cancer Research. 2005, OCT 15; 11(20): 7398-7404.
  1. 16.   Human leukocyte antigen class I and II haplotypes and risk of cervical cancer
  2. Carreon, J. D.; Martin, M. P.; Hildesheim, A.; Gao, X.; Schiffman, M.; Herrero, R.; Bratti, M. C.; Sherman, M. E.; Zaino, R. J.; Carrington, M.; Wang, S. S.
  3. Tissue Antigens. 2005, OCT; 66(4): 321-324.
  1. 17.   Protein-protein interactions: organization, cooperativity and mapping in a bottom-up Systems Biology approach
  2. Keskin, O.; Ma, B. Y.; Rogale, K.; Gunasekaran, K.; Nussinov, R.
  3. Physical Biology. 2005, JUN; 2(2): S24-S35.
  1. 18.   Single nucleotide polymorphisms and haplotypes in the IL10 region associated with HCV clearance
  2. Oleksyk, T. K.; Thio, C. L.; Truelove, A. L.; Goedert, J. J.; Donfield, S. M.; Kirk, G. D.; Thomas, D. L.; O'Brien, S. J.; Smith, M. W.
  3. Genes and Immunity. 2005, JUN; 6(4): 347-357.
  1. 19.   A common haplotype in the complement regulatory gene factor H (HF1/CFH) predisposes individuals to age-related macular degeneration
  2. Hageman, G. S.; Anderson, D. H.; Johnson, L. V.; Hancox, L. S.; Taiber, A. J.; Hardisty, L. I.; Hageman, J. L.; Stockman, H. A.; Borchardt, J. D.; Gehrs, K. M.; Smith, R. J. H.; Silvestri, G.; Russell, S. R.; Klaver, C. C. W.; Barbazetto, I.; Chang, S.; Yannuzzi, L. A.; Barile, G. R.; Merriam, J. C.; Smith, R. T.; Olsh, A. K.; Bergeron, J.; Zernant, J.; Merriam, J. E.; Gold, B.; Dean, M.; Allikmets, R.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2005, MAY 17; 102(20): 7227-7232.
  1. 20.   Water, socioeconomic factors, and human herpesvirus 8 infection in Ugandan children and their mothers
  2. Mbulaiteye, S. M.; Biggar, R. J.; Pfeiffer, R. M.; Bakaki, P. M.; Gamache, C.; Owor, A. M.; Katongole-Mbidde, E.; Ndugwa, C. M.; Goedert, J. J.; Whitby, D.; Engels, E. A.
  3. Jaids-Journal of Acquired Immune Deficiency Syndromes. 2005, APR 1; 38(4): 474-479.
  1. 21.   From structure to function: Methods and applications
  2. Wolfson, H. J.; Shatsky, M.; Schneidman-Duhovny, D.; Dror, O.; Shulman-Peleg, A.; Ma, B. Y.; Nussinov, R.
  3. Current Protein & Peptide Science. 2005, APR; 6(2): 171-183.
  1. 22.   A common genetic variant in FCGR3A-V158F and risk of Kaposi sarcoma herpesvirus infection and classic Kaposi sarcoma
  2. Brown, E. E.; Fallin, M. D.; Goedert, J. J.; Chen, R.; Whitby, D.; Foster, C. B.; Lauria, C.; Alberg, A. J.; Messina, A.; Montella, M.; Rezza, G.; Vitale, F.; Chanock, S. J.
  3. Cancer Epidemiology Biomarkers & Prevention. 2005, MAR; 14(3): 633-637.
  1. 23.   Low-dose secnidazole in the treatment of bacterial vaginosis
  2. Nunez, J. T.; Gomez, G.
  3. International Journal of Gynecology & Obstetrics. 2005 88(3): 281-285.
  1. 24.   Mapping genomic rearrangements in titi monkeys by chromosome flow sorting and multidirectional in-situ hybridization
  2. Dumas, F.; Bigoni, F.; Stone, G.; Sineo, L.; Stanyon, R.
  3. Chromosome Research. 2005 13(1): 85-96.
  1. 25.   Linking pathway gene expressions to the growth inhibition response from the National Cancer Institute's anticancer screen and drug mechanism of action
  2. Huang, R.; Wallqvist, A.; Thanki, N.; Covell, D. G.
  3. Pharmacogenomics Journal. 2005 5(6): 381-399.
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