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  1. 1.   Systematic characterization of multi-omics landscape between gut microbial metabolites and GPCRome in Alzheimer's disease
  2. Qiu, Yunguang; Hou, Yuan; Gohel, Dhruv; Zhou, Yadi; Xu, Jielin; Bykova, Marina; Yang, Yuxin; Leverenz, James B; Pieper, Andrew A; Nussinov,Ruth; Caldwell, Jessica Z K; Brown, J Mark; Cheng, Feixiong
  3. Cell Reports. 2024, Apr 21; 43(5): 114128.
  1. 2.   The fidelity of transcription in human cells
  2. Chung, Claire; Verheijen, Bert M; Zhang, Xinmin; Huang, Biao; Coakley, Aeowynn; McGann, Eric; Wade, Emily; Dinep-Schneider, Olivia; LaGosh, Jessica; Anagnostou, Maria-Eleni; Simpson, Stephen; Thomas, Kelly; Ernst, Mimi; Rattray, Allison; Lynch, Michael; Kashlev,Mikhail; Benayoun, Berenice A; Li, Zhongwei; Strathern,Jeffrey; Gout, Jean-Francois; Vermulst, Marc
  3. Proceedings of the National Academy of Sciences of the United States of America. 2023, Jan 31; 120(5): e2210038120.
  1. 3.   Harnessing endophenotypes and network medicine for Alzheimer's drug repurposing
  2. Fang, Jiansong; Pieper, Andrew A.; Nussinov,Ruth; Lee, Garam; Bekris, Lynn; Leverenz, James B.; Cummings, Jeffrey; Cheng, Feixiong
  3. Medicinal research reviews. 2020, NOV; 40(6): 2386-2426.
  1. 4.   Computational Investigation of Gantenerumab and Crenezumab Recognition of A beta Fibrils in Alzheimer's Disease Brain Tissue
  2. Chen, Yujie; Wei, Guanghong; Zhao, Jun; Nussinov,Ruth; Ma, Buyong
  3. ACS CHEMICAL NEUROSCIENCE. 2020, OCT 21; 11(20): 3233-3244.
  1. 5.   Recent strategies and advances in the fabrication of nano lipid carriers and their application towards brain targeting
  2. Agrawal, Mukta; Saraf, Swarnlata; Saraf, Shailendra; Dubey, Sunil Kumar; Puri,Anu; Patel, Ravish J.; Ravichandiran, V.; Murty, Upadhyayula Suryanarayana; Alexander, Amit
  3. Journal of controlled release : official journal of the Controlled Release Society. 2020, May 10; 321: 372-415.
  1. 6.   Molecular Recognition between A-Specific Single-Domain Antibody and A Misfolded Aggregates
  2. Zhang, Mingzhen; Zheng, Jie; Nussinov, Ruth; Ma, Buyong
  3. ANTIBODIES. 2018, Sep; 7(3):
  1. 7.   Androgen alleviates neurotoxicity of ß-amyloid peptide (Aß) by promoting microglial clearance of Aß and inhibiting microglial inflammatory response to Aß
  2. Yao, Peng-Le; Zhuo, Shu; Mei, Hong; Chen, Xiao-Fang; Li, Na; Zhu, Teng-Fei; Chen, Shi-Ting; Wang, Jiming; Hou, Rui-Xing; Le, Ying-Ying
  3. CNS Neuroscience & Therapeutics. 2017, NOV; 23(11): 855-865.
  1. 8.   Amyloid beta Ion Channels in a Membrane Comprising Brain Total Lipid Extracts
  2. Lee, Joon; Kim, Young Hun; Arce, Fernando T.; Gillman, Alan L.; Jang, Hyunbum; Kagan, Bruce L.; Nussinov, Ruth; Yang, Jerry; Lal, Ratnesh
  3. ACS CHEMICAL NEUROSCIENCE. 2017, Jun 21; 8(6): 1348-1357.
  1. 9.   CCAAT/enhancer binding protein delta (CEBPD) elevating PTX3 expression inhibits macrophage-mediated phagocytosis of dying neuron cells
  2. Ko, C. Y.; Chang, L. H.; Lee, Y. C.; Sterneck, E.; Cheng, C. P.; Chen, S. H.; Huang, A. M.; Tseng, J. T.; Wang, J. M.
  3. Neurobiology of Aging. 2012, Feb; 33(2):
  1. 10.   DNA immunization with HBsAg-based particles expressing a B cell epitope of amyloid beta-peptide attenuates disease progression and prolongs survival in a mouse model of Alzheimer's disease
  2. Olkhanud, P. B.; Mughal, M.; Ayukawa, K.; Malchinkhuu, E.; Bodogai, M.; Feldman, N.; Rothman, S.; Lee, J. H.; Chigurupati, S.; Okun, E.; Nagashima, K.; Mattson, M. P.; Biragyn, A.
  3. Vaccine. 2012, Feb; 30(9): 1650-1658.
  1. 11.   A role for presenilin in post-stress regulation: effects of presenilin mutations on Ca2+ currents in Drosophila
  2. Lu, Y. S.; Lv, Y. B.; Ye, Y. H.; Wang, Y. L.; Hong, Y.; Fortini, M. E.; Zhong, Y.; Xie, Z. P.
  3. Faseb Journal. 2007, Aug; 21(10): 2368-2378.
  1. 12.   gamma-cleavage-independent functions of presenilin, nicastrin, and aph-1 regulate cell-junction organization and prevent tau toxicity in vivo
  2. Doglio, L. E.; Kanwar, R.; Jackson, G. R.; Perez, M.; Avila, J.; Dingwal, C.; Dotti, C. G.; Fortini, M. E.; Feiguin, F.
  3. Neuron. 2006, MAY 4; 50(3): 359-375.
  1. 13.   The immunopharmacological properties of transforming growth factor beta
  2. Le, Y. Y.; Yu, X. J.; Ruan, L. F.; Wang, O. M.; Qi, D. F.; Zhu, J. J.; Lu, X. F.; Kong, Y.; Cai, K.; Pang, S. S.; Shi, X. L.; Wang, J. M.
  3. International Immunopharmacology. 2005, DEC; 5(13-14): 1771-1782.
  1. 14.   IL-4 inhibits the expression of mouse formyl peptide receptor 2, a receptor for amyloid beta(1-42), in a TNF-alpha-Activated microglia
  2. Iribarren, P.; Chen, K. Q.; Hu, J. Y.; Zhang, X.; Gong, W. H.; Wang, J. M.
  3. Journal of Immunology. 2005, NOV 1; 175(9): 6100-6106.
  1. 15.   CpG-containing oligodeoxynucleotide promotes microglial cell uptake of amyloid beta 1-42 peptide by up-regulating the expression of the G-protein-coupled receptor mFPR2
  2. Iribarren, P.; Chen, K. Q.; Hu, J. Y.; Gong, W. H.; Cho, E. H.; Lockett, S.; Uranchimeg, B.; Wang, J. M.
  3. Faseb Journal. 2005, OCT; 19(12): Published as FJ Express article on October 11, 2005.
  1. 16.   The role of microglial cell FPR2 receptor expression in Alzheimer's disease: Opposing effects of TNFaplha and IL-4 on FPR2 expression
  2. Iribarren, P.; Hu, J. Y.; Chen, K. Q.; Zhou, Y.; Gong, W. H.; Zhang, X.; Wang, J. M.
  3. Faseb Journal. 2005, MAR 7; 19(5, Part 2, Suppl. S): A1418-A1418.
  1. 17.   (salen)Mn-III compounds as nonpeptidyl mimics of catalase. Mechanism-based tuning of catalase activity: A theoretical study
  2. Abashkin, Y. G.; Burt, S. K.
  3. Inorganic Chemistry. 2005, MAR 7; 44(5): 1425-1432.
  1. 18.   (Salen)Mn(III) compound as a nonpeptidyl mimic of catalase: DFT study of the metal oxidation by a peroxide molecule
  2. Abashkin, Y. G.; Burt, S. K.
  3. Journal of Physical Chemistry B. 2004 108(8): 2708-2711.
  1. 19.   Humanin, a newly identified neuroprotective factor, uses the g protein-coupled formylpeptide receptor-like-1 as a functional receptor
  2. Ying, G. G.; Iribarren, P.; Zhou, Y.; Gong, W. H.; Zhang, N.; Yu, Z. X.; Le, Y.; Cui, Y.; Wang, J. M.
  3. Journal of Immunology. 2004 172(11): 7078-7085.
  1. 20.   Mutant presenilins specifically elevate the levels of the 42 residue beta-amyloid peptide in vivo: evidence for augmentation of a 42-specific gamma secretase
  2. Jankowsky, J. L.; Fadale, D. J.; Anderson, J.; Xu, G. M.; Gonzales, V.; Jenkins, N. A.; Copeland, N. G.; Lee, M. K.; Younkin, L. H.; Wagner, S. L.; Younkin, S. G.; Borchelt, D. R.
  3. Human Molecular Genetics. 2004 13(2): 159-170.
  1. 21.   Human neurodegenerative disease modeling using Drosophila
  2. Bonini, N. M.; Fortini, M. E.
  3. Annual Review of Neuroscience. 2003 26: 627-656.
  1. 22.   Receptors for chemotactic formyl peptides as pharmacological targets
  2. Le, Y. Y.; Yang, Y. M.; Cui, Y. H.; Yazawa, H.; Gong, W. H.; Qiu, C. P.; Wang, J. M.
  3. International Immunopharmacology. 2002 2(1): 1-13.
  1. 23.   The central role of the trans-golgi network as a gateway of the early secretory pathway: Physiologic vs nonphysiologic protein transit
  2. Tekirian, T. L.
  3. Experimental Cell Research. 2002 281(1): 9-18.
  1. 24.   Pleiotropic roles of formyl peptide receptors
  2. Le, Y. Y.; Oppenheim, J. J.; Wang, J. M.
  3. Cytokine & Growth Factor Reviews. 2001 12(1): 91-105.
  1. 25.   beta amyloid peptide (A beta(42)) is internalized via the G- protein-coupled receptor FPRL1 and forms fibrillar aggregates in macrophages
  2. Yazawa, H.; Yu, Z. X.; Takeda, K.; Le, Y.; Gong, W. H.; Ferrans, V. J.; Oppenheim, J. J.; Li, C. C. H.; Wang, J. M.
  3. Faseb Journal. 2001 15(13): 2454-2462.
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