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  1. 1.   Duplicate entries in the Protein Data Bank: how to detect and handle them
  2. Wlodawer,Alexander; Dauter, Zbigniew; Rubach, Pawel; Minor, Wladek; Jaskolski, Mariusz; Jiang, Ziqiu; Jeffcott, William; Anosova, Olga; Kurlin, Vitaliy
  3. Acta Crystallographica. Section D, Structural Biology. 2025, Apr 01;
  1. 2.   Improvements in large-scale production of Tobacco Etch Virus protease
  2. Messing,Simon; Barnhart,Kirsten; Drew,Matt; Granato-Guerrero,Natalie; Grose,Carissa; Higgins,Brianna; Hong,Min; Hull,Jenna; Perkins,Shelley; Poon,Ivy; Ramakrishnan,Nitya; Seabolt,Amanda; Taylor,Troy; Wall,Vanessa; Wright,Nick; Gillette,Bill; Esposito,Dom
  3. Protein Expression and Purification. 2024, Dec 14; 106648.
  1. 3.   Bisubstrate inhibitors of 6-hydroxymethyl-7,8-dihydroptein pyrophosphokinase: Toward cell permeability
  2. Shi,Genbin; Shaw,Gary; Ji,Xinhua
  3. Bioorganic & Medicinal Chemistry Letters. 2024, Sep 25; 129977.
  1. 4.   Nano-mupirocin as tumor-targeted antibiotic: Physicochemical, immunotoxicological and pharmacokinetic characterization, and effect on gut microbiome
  2. Cern, Ahuva; Skoczen,Sarah; Snapp, Kelsie S; Hod, Atara; Zilbersheid, Daniel; Bavli, Yaelle; Alon-Maimon, Tamar; Bachrach, Gilad; Wei, Xiaohui; Berman, Bella; Yassour, Moran; Cedrone,Edward; Neun,Barry; Dobrovolskaia,Marina; Clogston,Jeffrey; Stern,Steve; Barenholz, Yechezkel
  3. Journal of Controlled Release : official journal of the Controlled Release Society. 2024, Aug 2; 373: 713-726.
  1. 5.   Stability and gene strand bias of lambda prophages and chromosome organization in Escherichia coli
  2. Li, Xintian; Gallardo, Oscar; August, Elias; Dassa, Bareket; Court,Don; Stavans, Joel; Arbel-Goren, Rinat
  3. mBio. 2024, Jun 18; e0207823.
  1. 6.   P1' specificity of the S219V/R203G mutant tobacco etch virus protease
  2. Golda, Mária; Hoffka, Gyula; Cherry,Scott; Tropea, Joseph E; Lountos,George; Waugh, David S; Wlodawer,Alexander; Tozsér, József; Mótyán, János András
  3. Proteins. 2024, Apr 26;
  1. 7.   Unexpected tobacco etch virus (TEV) protease cleavage of recombinant human proteins
  2. Beaumont,Lauren; Mehalko,Jennifer; Johnson,Adam; Wall,Vanessa; Esposito,Dom
  3. Protein Expression and Purification. 2024, Apr 26; 220: 106488.
  1. 8.   Adapting recombinant bacterial alkaline phosphatase for nucleotide exchange of small GTPases
  2. Frank,Peter; Hong, Min; Higgins, Brianna; Perkins, Shelley; Taylor, Troy; Wall,Vanessa; Drew,Matt; Waybright, Timothy; Gillette,Bill; Esposito,Dom; Messing, Simon
  3. Protein Expression and Purification. 2024, Feb 21; 106446.
  1. 9.   Identification of a new export signal that targets early subunits to the flagellar type III secretion export machinery
  2. Bryant, Owain J; Fraser, Gillian M
  3. mBio. 2024, Feb 20; e0306723.
  1. 10.   Purification of Circular RNAs Using Poly(A) Tailing Followed by RNase R Digestion
  2. Xiao, Mei-Sheng; Wilusz, Jeremy E
  3. Methods in Molecular Biology (Clifton, N.J.). 2024 2765: 3-19.
  1. 11.   Sequencing-based functional assays for classification of BRCA2 variants in mouse ESCs
  2. Biswas,Kajal; Mitrophanov,Alex; Sahu,Sounak; Sullivan,Teresa; Southon,Eileen; Nousome,Darryl; Reid, Susan; Narula, Sakshi; Smolen, Julia; Sengupta, Trisha; Riedel-Topper, Maximilian; Kapoor, Medha; Babbar, Anav; Stauffer,Stacey; Cleveland, Linda; Tandon, Mayank; Malys,Tyler; Sharan,Shyam
  3. Cell Reports Methods. 2023, Nov 20; 3(11): 100628.
  1. 12.   Identification of Structural and Morphogenesis Genes of Sulfitobacter Phage FGT1 and Placement within the Evolutionary History of the Podoviruses
  2. Hardies, Stephen C; Cho, Byung Cheol; Jang, Gwang Il; Wang,Jenny; Hwang, Chung Yeon
  3. Viruses. 2023, Jun 29; 15(7):
  1. 13.   Robust regulation of transcription pausing in Escherichia coli by the ubiquitous elongation factor NusG
  2. Yakhnin,Alex; Bubunenko,Mikhail; Mandell, Zachary F; Lubkowska,Lucyna; Husher, Sara; Babitzke, Paul; Kashlev,Mikhail
  3. Proceedings of the National Academy of Sciences of the United States of America. 2023, Jun 13; 120(24): e2221114120.
  1. 14.   Mycobacterial Immune Reconstitution Inflammatory Syndrome in HIV is Associated With Protein-Altering Variants in Hemophagocytic Lymphohistiocytosis-Related Genes
  2. Rocco, Joseph M; Laidlaw, Elizabeth; Galindo, Frances; Anderson, Megan; Sortino, Ornella; Kuriakose,Safia; Lisco, Andrea; Manion, Maura; Sereti, Irini
  3. The Journal of Infectious Diseases. 2023, Apr 11;
  1. 15.   Structure of Helicobacter pylori dihydroneopterin aldolase suggests a fragment-based strategy for isozyme-specific inhibitor design
  2. Shaw,Gary; Fan,Lixin; Cherry,Scott; Shi,Genbin; Tropea, Joseph E; Ji,Xinhua
  3. Current Research in Structural Biology. 2023, Jan 30; 5: 100095.
  1. 16.   Recombineering in Non-Model Bacteria
  2. Corts, Anna; Thomason,Lynn; Costantino, Nina; Court,Don
  3. Current Protocols. 2022, Dec; 2(12): e605.
  1. 17.   The E. coli L-asparaginase V27T mutant: structural and functional characterization and comparison with theoretical predictions
  2. Strzelczyk, Pawel; Zhang,Di; Wlodawer,Alexander; Lubkowski,Jacek
  3. FEBS Letters. 2022, Oct 30; 596(23): 3060-3068.
  1. 18.   The dimeric form of bacterial L-asparaginase YpAI is fully active
  2. Strzelczyk,Pawel; Zhang,Di; Alexandratos,Jerry; Piszczek, Grzegorz; Wlodawer,Alexander; Lubkowski,Jacek
  3. The FEBS Journal. 2022, Sep 24;
  1. 19.   Study of Ren, RexA, and RexB Functions Provides Insight Into the Complex Interaction Between Bacteriophage ? and Its Host, Escherichia coli
  2. Thomason,Lynn; Court,Don
  3. PHAGE (New Rochelle, N.Y.). 2022, Sep 01; 3(3): 153-164.
  1. 20.   Severe mycobacterial IRIS in advanced HIV has features of hemophagocytic lymphohistiocytosis and requires prolonged immune suppression
  2. Rocco, Joseph M; Laidlaw, Elizabeth; Galindo, Frances; Anderson, Megan; Rupert,Adam; Higgins,Jeanette; Sortino, Ornella; Ortega-Villa, Ana M; Sheikh, Virginia; Roby, Gregg; Kuriakose, Safia; Lisco, Andrea; Manion, Maura; Sereti, Irini
  3. Clinical Infectious Diseases : an official publication of the Infectious Diseases Society of America. 2022, Sep 01;
  1. 21.   Cefiderocol and the Need for Higher-Quality Evidence: Methods Matter for Patients
  2. Epling, Brian P; Powers,John
  3. Antimicrobial Agents and Chemotherapy. 2022, Jul 18; e0076622.
  1. 22.   Homologs of the Escherichia coli F Element Protein TraR, Including Phage Lambda Orf73, Directly Reprogram Host Transcription
  2. Gopalkrishnan, Saumya; Ross, Wilma; Akbari, Madeline S; Li, Xintian; Haycocks, James R J; Grainger, David C; Court,Don; Gourse, Richard L
  3. mBio. 2022, May 18; e0095222.
  1. 23.   Reply to Wang et al., "Assessment of the Abundance and Potential Function of Human Papillomavirus Type 16 Circular E7 RNA"
  2. Yu,Lulu; Lobanov, Alexei; Zheng,Zhi-Ming
  3. mBio. 2022, May 17; e0075822.
  1. 24.   Mycobacterium tuberculosis Induces Irg1 in Murine Macrophages by a Pathway Involving Both TLR-2 and STING/IFNAR Signaling and Requiring Bacterial Phagocytosis
  2. Bomfim, Caio C B; Fisher, Logan; Amaral, Eduardo P; Mittereder, Lara; McCann, Katelyn; Correa, André A S; Namasivayam, Sivaranjani; Swamydas, Muthulekha; Moayeri, Mahtab; Weiss,Jonathan; Chari,Raj; McVicar,Daniel; Costa, Diego L; D'Império Lima, Maria R; Sher, Alan
  3. Frontiers in Cellular and Infection Microbiology. 2022, May 2; 12: 862582.
  1. 25.   Structures of the Type IX Secretion/Gliding Motility Motor from across the Phylum Bacteroidetes
  2. Hennell James, Rory; Deme,Justin; Hunter, Alicia; Berks, Ben C; Lea,Susan
  3. mBio. 2022, Apr 21; e0026722.
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