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  1. 1.   Structural and functional insights into inhibition of human voltage-gated sodium channels by µ-conotoxin KIIIA disulfide isomers
  2. Tran, Hue N T; McMahon, Kirsten L; Deuis, Jennifer R; Vetter, Irina; Schroeder,Christina
  3. The Journal of Biological Chemistry. 2022, Feb 12; 298(3): 101728.
  1. 2.   An ultra-stable redox-controlled self-assembling polypeptide nanotube for targeted imaging and therapy in cancer
  2. Asampille, Gitanjali; Verma, Brijesh Kumar; Swain, Monalisa; Shettar, Abhijith; Rosenzweig, Steven A; Kondaiah, Paturu; Atreya, Hanudatta S
  3. Journal of nanobiotechnology. 2018, Dec 08; 16(1): 101.
  1. 3.   Allosteric control of antibody-prion recognition through oxidation of a disulfide bond between the CH and CL chains.
  2. Zhao, Jun; Nussinov, Ruth; Ma, Buyong
  3. Protein engineering, design & selection: PEDS. 2017, Jan; 30(1): 67-76.
  1. 4.   Crystal structure of N-{N-[N-acetyl-(S)-leuc-yl]-(S)-leuc-yl}norleucinal (ALLN), an inhibitor of proteasome
  2. Czerwinski, Andrzej; Basava, Channa; Dauter, Miroslawa; Dauter, Zbigniew
  3. Acta crystallographica. Section E, Crystallographic communications. 2015, Mar 01; 71(Pt 3): 254-7.
  1. 5.   Structure of a eukaryotic RNase III postcleavage complex reveals a double-ruler mechanism for substrate selection
  2. Liang, Y. H.; Lavoie, M.; Comeau, M. A.; Abou Elela, S.; Ji, X.
  3. Molecular Cell. 2014, 8-May; 54(3): 431-44.
  1. 6.   Crystal structures of beta-1,4-galactosyltransferase 7 enzyme reveal conformational changes and substrate binding
  2. Tsutsui, Y.; Ramakrishnan, B.; Qasba, P. K.
  3. Journal of Biological Chemistry. 2013, 1-Nov; 288(44): 31963-70.
  1. 7.   Application of silver N-heterocyclic carbene complexes in O-glycosidation reactions
  2. Talisman, I. J.; Kumar, V.; Deschamps, J. R.; Frisch, M.; Malhotra, S. V.
  3. Carbohydrate Research. 2011, Nov; 346(15): 2337-2341.
  1. 8.   Induced fit, conformational selection and independent dynamic segments: an extended view of binding events
  2. Csermely, P.; Palotai, R.; Nussinov, R.
  3. Trends in Biochemical Sciences. 2010, Oct; 35(10): 539-546.
  1. 9.   Understanding Blue-to-Red Conversion in Monomeric Fluorescent Timers and Hydrolytic Degradation of Their Chromophores
  2. Pletnev, S.; Subach, F. V.; Dauter, Z.; Wlodawer, A.; Verkhusha, V. V.
  3. Journal of the American Chemical Society. 2010, Feb; 132(7): 2243-2253.
  1. 10.   Application of ring-closing metathesis macrocyclization to the development of Tsg101-binding antagonists
  2. Liu, F.; Stephen, A. G.; Waheed, A. A.; Freed, E. O.; Fisher, R. J.; Burke, T. R.
  3. Bioorganic & Medicinal Chemistry Letters. 2010, Jan; 20(1): 318-321.
  1. 11.   Engineered Human Antibody Constant Domains with Increased Stability
  2. Gong, R.; Vu, B. K.; Feng, Y.; Prieto, D. A.; Dyba, M. A.; Walsh, J. D.; Prabakaran, P.; Veenstra, T. D.; Tarasov, S. G.; Ishima, R.; Dimitrov, D. S.
  3. Journal of Biological Chemistry. 2009 284(21): 14203-14210.
  1. 12.   Role of the HIV gp120 conserved domain 5 in processing and viral entry
  2. Sen, J.; Jacobs, A.; Caffrey, M.
  3. Biochemistry. 2008 47(30): 7788-7795.
  1. 13.   Stereochemical restraints revisited: how accurate are refinement targets and how much should protein structures be allowed to deviate from them?
  2. Jaskolski, M.; Gilski, M.; Dauter, Z.; Wlodawer, A.
  3. Acta Crystallographica Section D-Biological Crystallography. 2007, May; 63: 611-620.
  1. 14.   Natural resonance structures and aromaticity of the nucleobases
  2. Sun, G. Y.; Nicklaus, M. C.
  3. Theoretical Chemistry Accounts. 2007, Feb; 117(2): 323-332.
  1. 15.   Understanding antibody-antigen associations by molecular dynamics simulations: Detection of important intra- and inter-molecular salt bridges
  2. Sinha, N.; Li, Y. L.; Lipschultz, C. A.; Smith-Gill, S. J.
  3. Cell Biochemistry and Biophysics. 2007 47(3): 361-375.
  1. 16.   Studies of the biological properties of human beta-defensin 1
  2. Pazgier, M.; Prahl, A.; Hoover, D. M.; Lubkowski, J.
  3. Journal of Biological Chemistry. 2007, Jan; 282(3): 1819-1829.
  1. 17.   A new perspective in the Lewis acid catalyzed ring opening of epoxides. Theoretical study of some complexes of methanol, acetic acid, dimethyl ether, diethyl ether, and ethylene oxide with boron trifluoride
  2. Saenz, P.; Cachau, R. E.; Seoane, G.; Kieninger, M.; Ventura, O. N.
  3. Journal of Physical Chemistry A. 2006, Oct; 110(41): 11734-11751.
  1. 18.   Catalytic role of proton transfers in the formation of a tetrahedral adduct in a serine carboxyl peptidase
  2. Guo, H. B.; Wlodawer, A.; Nakayama, T.; Xu, Q.; Guo, H.
  3. Biochemistry. 2006, Aug; 45(30): 9129-9137.
  1. 19.   Structure of severe acute respiratory syndrome coronavirus receptor-binding domain complexed with neutralizing antibody
  2. Prabakaran, P.; Gan, J. H.; Feng, Y.; Zhu, Z. Y.; Choudhry, V.; Xiao, X. D.; Ji, X. H.; Dimitrov, D. S.
  3. Journal of Biological Chemistry. 2006, JUN 9; 281(23): 15829-15836.
  1. 20.   Overexpression and purification of scytovirin, a potent, novel anti-HIV protein from the cultured cyanobacterium Scytonema varium
  2. Xiong, C. Y.; O'Keefe, B. R.; Botos, I.; Wlodawer, A.; McMahon, J. B.
  3. Protein Expression and Purification. 2006, Apr; 46(2): 233-239.
  1. 21.   Structural mimicry of CD4 by a cross-reactive HIV-1 neutralizing antibody with CDR-H2 and H3 containing unique motifs
  2. Prabakaran, P.; Gan, J. H.; Wu, Y. Q.; Zhang, M. Y.; Dimitrov, D. S.; Ji, X. H.
  3. Journal of Molecular Biology. 2006, MAR 17; 357(1): 82-99.
  1. 22.   Atomic-level description of amyloid beta-dimer formation
  2. Gnanakaran, S.; Nussinov, R.; Garcia, A. E.
  3. Journal of the American Chemical Society. 2006, Feb; 128(7): 2158-2159.
  1. 23.   Structural and dynamical classification of RNA single-base bulges for nanostructure design
  2. Hastings, W. A.; Yingling, Y. G.; Chirikjian, G. S.; Shapiro, B. A.
  3. Journal of Computational and Theoretical Nanoscience. 2006, FEB; 3(1): 63-77.
  1. 24.   E/Z conformation and the vibrational spectroscopy of Me2NN(O)=NOMe
  2. Bohle, D. S.; Ivanic, J.; Saavedra, J. E.; Smith, K. N.; Wang, Y. N.
  3. Journal of Physical Chemistry A. 2005, DEC 15; 109(49): 11317-11321.
  1. 25.   Combinatorial docking approach for structure prediction of large proteins and multi-molecular assemblies
  2. Inbar, Y.; Benyamini, H.; Nussinov, R.; Wolfson, H. J.
  3. Physical Biology. 2005, DEC; 2(4, Sp. Iss.): S156-S165.
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