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  1. 1.   Synthesis of Fused Bicyclic Systems with Nitrogen Atom at the Bridgehead, Including Indolizidines and Quinolizidines
  2. Pepe, A.; Pamment, M.; Georg, G. I.; Malhotra, S. V.
  3. Journal of Organic Chemistry. 2011, May; 76(9): 3527-3530.
  1. 2.   Symmetry-Based Self-assembled Nanotubes Constructed Using Native Protein Structures: The Key Role of Flexible Linkers
  2. Buch, I.; Tsai, C. J.; Wolfson, H. J.; Nussinov, R.
  3. Protein and Peptide Letters. 2011, Apr; 18(4): 362-372.
  1. 3.   Accounting for multiple comparisons in a genome-wide association study (GWAS)
  2. Johnson, R. C.; Nelson, G. W.; Troyer, J. L.; Lautenberger, J. A.; Kessing, B. D.; Winkler, C. A.; O'Brien, S. J.
  3. Bmc Genomics. 2010, Dec; 11: 6.
  1. 4.   Activation of glycosyl trichloroacetimidates with perchloric acid on silica (HClO4-SiO2) provides enhanced alpha-selectivity
  2. Ludek, O. R.; Gu, W. L.; Gildersleeve, J. C.
  3. Carbohydrate Research. 2010, Sep 23; 345(14): 2074-2078.
  1. 5.   Computational Validation of Protein Nanotubes
  2. Buch, I.; Brooks, B. R.; Wolfson, H. J.; Nussinov, R.
  3. Nano Letters. 2009 9(3): 1096-1102.
  1. 6.   Mutational Analysis and Allosteric Effects in the HIV-1 Capsid Protein Carboxyl-Terminal Dimerization Domain
  2. Yu, X.; Wang, Q. M.; Yang, J. C.; Buch, I.; Tsai, C. J.; Ma, B. Y.; Cheng, S.; Nussinov, R.; Zheng, J.
  3. Biomacromolecules. 2009 10(2): 390-399.
  1. 7.   Protein Segments with Conformationally Restricted Amino Acids Can Control Supramolecular Organization at the Nanoscale
  2. Zanuy, D.; Ballano, G.; Jimenez, A. I.; Casanovas, J.; Haspel, N.; Cativiela, C.; Curco, D.; Nussinov, R.; Aleman, C.
  3. Journal of Chemical Information and Modeling. 2009 49(7): 1623-1629.
  1. 8.   Structural Analysis of a beta-Helical Protein Motif Stabilized by Targeted Replacements with Conformationally Constrained Amino Acids
  2. Ballano, G.; Zanuy, D.; Jimenez, A. I.; Cativiela, C.; Nussinov, R.; Aleman, C.
  3. Journal of Physical Chemistry B. 2008 112(41): 13101-13115.
  1. 9.   RNAJunction: a database of RNA junctions and kissing loops for three-dimensional structural analysis and nanodesign
  2. Bindewald, E.; Hayes, R.; Yingling, Y. G.; Kasprzak, W.; Shapiro, B. A.
  3. Nucleic Acids Research. 2008 36: D392-D397.
  1. 10.   Conformational Preferences of beta- and gamma-Aminated Proline Analogues
  2. Flores-Ortega, A.; Casanovas, J.; Nussinov, R.; Aleman, C.
  3. Journal of Physical Chemistry B. 2008 112(44): 14045-14055.
  1. 11.   The energy landscape of a selective tumor-homing pentapeptide
  2. Zanuy, D.; Flores-Ortega, A.; Casanovas, J.; Curco, D.; Nussinov, R.; Aleman, C.
  3. Journal of Physical Chemistry B. 2008 112(29): 8692-8700.
  1. 12.   Testing beta-helix terminal coils stability by targeted substitutions with non-proteogenic amino acids: A molecular dynamics study
  2. Zanuy, D.; Rodriguez-Ropero, F.; Nussinov, R.; Aleman, C.
  3. Journal of Structural Biology. 2007, Nov; 160(2): 177-189.
  1. 13.   Stability of tubular structures based on beta-helical proteins: Self-assembled versus polymerized nanoconstructs and wild-type versus mutated sequences
  2. Zanuy, D.; Rodriguez-Ropero, F.; Haspel, N.; Zheng, J.; Nussinov, R.; Aleman, C.
  3. Biomacromolecules. 2007, Oct; 8(10): 3135-3146.
  1. 14.   Principles of nanostructure design with protein building blocks
  2. Tsai, C. J.; Zheng, J.; Zanuy, D.; Haspel, N.; Wolfson, H.; Aleman, C.; Nussinov, R.
  3. Proteins-Structure Function and Bioinformatics. 2007, Jul; 68(1): 1-12.
  1. 15.   Cell nuclei spin in the absence of lamin B1
  2. Ji, J. Y.; Lee, R. T.; Vergnes, L.; Fong, L. G.; Stewart, C. L.; Reue, K.; Young, S. G.; Zhang, Q. P.; Shanahan, C. M.; Lammerding, J.
  3. Journal of Biological Chemistry. 2007, Jul; 282(27): 20015-20026.
  1. 16.   Lamins A and C but not lamin B1 regulate nuclear mechanics
  2. Lammerding, J.; Fong, L. G.; Ji, J. Y.; Reue, K.; Stewart, C. L.; Young, S. G.; Lee, R. T.
  3. Journal of Biological Chemistry. 2006, Sep; 281(35): 25768-25780.
  1. 17.   Evolution of a cytoplasmic tripartite motif (TRIM) protein in cows that restricts retroviral infection
  2. Si, Z. H.; Vandegraaff, N.; O'HUigin, C.; Song, B.; Yuan, W.; Xu, C.; Perron, M.; Li, X.; Marasco, W. A.; Engelman, A.; Dean, M.; Sodroski, J.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2006, MAY 9; 103(19): 7454-7459.
  1. 18.   Sphingolipids, cholesterol, and HIV-1: A paradigm in viral fusion
  2. Rawat, S. S.; Viard, M.; Gallo, S. A.; Blumenthal, R.; Puri, A.
  3. Glycoconjugate Journal. 2006, MAY; 23(3-4): 189-197.
  1. 19.   Inhibition of transcription factor NF-kappa B signaling proteins IKK beta and p65 through specific cysteine residues by epoxyquinone A monomer: Correlation with its anti-cancer cell growth activity
  2. Liang, M. C.; Bardhan, S.; Pace, E. A.; Rosman, D.; Beutler, J. A.; Porco, J. A.; Gilmore, T. D.
  3. Biochemical Pharmacology. 2006, FEB 28; 71(5): 634-645.
  1. 20.   Combinatorial docking approach for structure prediction of large proteins and multi-molecular assemblies
  2. Inbar, Y.; Benyamini, H.; Nussinov, R.; Wolfson, H. J.
  3. Physical Biology. 2005, DEC; 2(4, Sp. Iss.): S156-S165.
  1. 21.   Topotecan blocks hypoxia-inducible factor-1 alpha, and vascular endothelial growth factor expression induced by insulin-like growth factor-I in neuroblastoma cells
  2. Beppu, Y.; Nakamura, K.; Linehan, W. M.; Rapisarda, A.; Thiele, C. J.
  3. Cancer Research. 2005, JUN 1; 65(11): 4775-4781.
  1. 22.   Inositol hexaphosphate (IP6) blocks proliferation of human breast cancer cells through a PKC delta-dependent increase in p27(Kip1) and decrease in retinoblastoma protein (pRb) phosphorylation
  2. Vucenik, I.; Ramakrishna, G.; Tantivejkul, K.; Anderson, L. M.; Ramljak, D.
  3. Breast Cancer Research and Treatment. 2005, MAY; 91(1): 35-45.
  1. 23.   Efficacy, plasma pharmacokinetics, and safety of icofungipen, an inhibitor of Candida isoleucyl-tRNA synthetase, in treatment of experimental disseminated candidiasis in persistently neutropenic rabbits
  2. Petraitiene, R.; Petraitis, V.; Kelaher, A. M.; Sarafandi, A. A.; Mickiene, D.; Groll, A. H.; Sein, T.; Bacher, J.; Walsh, T. J.
  3. Antimicrobial Agents and Chemotherapy. 2005, MAY; 49(5): 2084-2092.
  1. 24.   The linkage disequilibrium maps of three human chromosomes across four populations reflect their demographic history and a common underlying recombination pattern
  2. De La Vega, F. M.; Isaac, H.; Collins, A.; Scafe, C. R.; Halldorsson, B. V.; Su, X. P.; Lippert, R. A.; Wang, Y.; Laig-Webster, M.; Koehler, R. T.; Ziegle, J. S.; Wogan, L. T.; Stevens, J. F.; Leinen, K. M.; Olson, S. J.; Guegler, K. J.; You, X. Q.; Xu, L. H.; Hemken, H. G.; Kalush, F.; Itakura, M.; Zheng, Y.; de The, G.; O'Brien, S. J.; Clark, A. G.; Istrail, S.; Hunkapiller, M. W.; Spier, E. G.; Gilbert, D. A.
  3. Genome Research. 2005, APR; 15(4): 454-462.
  1. 25.   Elimination of retroviral infectivity by N-ethylmaleimide with preservation of functional envelope glycoproteins
  2. Morcock, D. R.; Thomas, J. A.; Gagliardi, T. D.; Gorelick, R. J.; Roser, J. D.; Chertova, E. N.; Bess, J. W.; Ott, D. E.; Sattentau, Q. J.; Frank, I.; Pope, M.; Lifson, J. D.; Henderson, L. E.; Crise, B. J.
  3. Journal of Virology. 2005, FEB; 79(3): 1533-1542.
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