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  1. 1.   Protein Phosphatase 1 Regulatory Subunit PNUTS Prevents CENP-A Mislocalization and Chromosomal Instability
  2. Balachandra, Vinutha; Thomas, Makenzie; Shrestha, Roshan L; Sethi, Subhash Chandra; Chari,Rajagopal; Lin, Shinjen; Chih-Chien Cheng, Ken; Karpova, Tatiana S; Caplen, Natasha J; Basrai, Munira A
  3. Molecular and Cellular Biology. 2025, Apr 24; 1-13.
  1. 2.   Telomere length and clonal chromosomal alterations in peripheral blood of patients with severe aplastic anaemia
  2. Strauss, Joshua D; Brown, Derek W; Zhou, Weiyin; Dagnall,Casey; Yuan, Jian-Min; Im, Annie; Savage, Sharon A; Wang, Youjin; Rafati, Maryam; Spellman, Stephen R; Gadalla, Shahinaz M
  3. British Journal of Haematology. 2024, Aug 05;
  1. 3.   DNAJC9 prevents CENP-A mislocalization and chromosomal instability by maintaining the fidelity of histone supply chains
  2. Balachandra, Vinutha; Shrestha, Roshan L; Hammond, Colin M; Lin, Shinjen; Hendriks, Ivo A; Sethi, Subhash Chandra; Chen, Lu; Sevilla, Samantha; Caplen, Natasha J; Chari,Raj; Karpova, Tatiana S; McKinnon, Katherine; Todd, Matthew Am; Koparde,Vishal; Cheng, Ken Chih-Chien; Nielsen, Michael L; Groth, Anja; Basrai, Munira A
  3. The EMBO Journal. 2024, Apr 10;
  1. 4.   Insights into the mechanisms and structure of breakage-fusion-bridge cycles in cervical cancer using long-read sequencing
  2. Rodriguez, Isabel; Rossi, Nicole M; Keskus, Ayse G; Xie, Yi; Ahmad, Tanveer; Bryant, Asher; Lou,Hong; Paredes, Jesica Godinez; Milano, Rose; Rao, Nina; Tulsyan, Sonam; Boland, Joseph F; Luo,Wen; Liu,Jia; O'Hanlon, Tim; Bess, Jazmyn; Mukhina, Vera; Gaykalova, Daria; Yuki, Yuko; Malik, Laksh; Billingsley, Kimberley J; Blauwendraat, Cornelis; Carrington, Mary; Yeager,Meredith; Mirabello, Lisa; Kolmogorov, Mikhail; Dean, Michael
  3. American Journal of Human Genetics. 2024, Jan 25;
  1. 5.   Histone H3/H4 chaperone CHAF1B prevents the mislocalization of CENP-A for chromosomal stability
  2. Shrestha, Roshan L; Balachandra, Vinutha; Kim, Jee Hun; Rossi, Austin; Vadlamani, Pranathi; Sethi, Subhash Chandra; Ozbun, Laurent; Lin, Shinjen; Cheng, Ken Chin-Chien; Chari,Raj; Karpova, Tatiana S; Pegoraro, Gianluca; Foltz, Daniel R; Caplen, Natasha J; Basrai, Munira A
  3. Journal of Cell Science. 2023, May 02; 136(10):
  1. 6.   Pre-HCT mosaicism increases relapse risk and lowers survival in acute lymphoblastic leukemia patients post-unrelated HCT
  2. Wang, Yiwen; Zhou,Weiyin; Wang, Junke; Karaesmen, Ezgi; Tang, Hancong; McCarthy, Philip L.; Pasquini, Marcelo C.; Wang, Youjin; McReynolds, Lisa J.; Katki, Hormuzd A.; Machiela, Mitchell J.; Yeager,Meredith; Pooler, Loreall; Sheng, Xin; Haiman, Christopher A.; Van den Berg, David; Spellman, Stephen R.; Wang, Tao; Kuxhausen, Michelle; Chanock, Stephen J.; Lee, Stephanie J.; Clay-Gilmour, Alyssa; Hahn, Theresa E.; Gadalla, Shahinaz M.; Sucheston-Campbell, Lara E.
  3. Blood Advances. 2021, Jan 12; 5(1): 66-70.
  1. 7.   Integrated Proteogenomic Characterization of Clear Cell Renal Cell Carcinoma
  2. Clark, David J; Dhanasekaran, Saravana M; Petralia, Francesca; Pan, Jianbo; Song, Xiaoyu; Hu, Yingwei; da Veiga Leprevost, Felipe; Reva, Boris; Lih, Tung-Shing M; Chang, Hui-Yin; Ma, Weiping; Huang, Chen; Ricketts, Christopher J; Chen, Lijun; Krek, Azra; Li, Yize; Rykunov, Dmitry; Li, Qing Kay; Chen, Lin S; Ozbek, Umut; Vasaikar, Suhas; Wu, Yige; Yoo, Seungyeul; Chowdhury, Shrabanti; Wyczalkowski, Matthew A; Ji, Jiayi; Schnaubelt, Michael; Kong, Andy; Sethuraman, Sunantha; Avtonomov, Dmitry M; Ao, Minghui; Colaprico, Antonio; Cao, Song; Cho, Kyung-Cho; Kalayci, Selim; Ma, Shiyong; Liu, Wenke; Ruggles, Kelly; Calinawan, Anna; Gümüs, Zeynep H; Geizler, Daniel; Kawaler, Emily; Teo, Guo Ci; Wen, Bo; Zhang, Yuping; Keegan, Sarah; Li, Kai; Chen, Feng; Edwards, Nathan; Pierorazio, Phillip M; Chen, Xi Steven; Pavlovich, Christian P; Hakimi, A Ari; Brominski, Gabriel; Hsieh, James J; Antczak, Andrzej; Omelchenko, Tatiana; Lubinski, Jan; Wiznerowicz, Maciej; Linehan, W Marston; Kinsinger, Christopher R; Thiagarajan,Mathangi; Boja, Emily S; Mesri, Mehdi; Hiltke, Tara; Robles, Ana I; Rodriguez, Henry; Qian, Jiang; Fenyö, David; Zhang, Bing; Ding, Li; Schadt, Eric; Chinnaiyan, Arul M; Zhang, Zhen; Omenn, Gilbert S; Cieslik, Marcin; Chan, Daniel W; Nesvizhskii, Alexey I; Wang, Pei; Zhang, Hui
  3. Cell. 2019, Oct 31; 179(4): 964-983.e31.
  1. 8.   Chromosomal Aberrations and Survival after Unrelated Donor Hematopoietic Stem Cell Transplant in Patients with Fanconi Anemia
  2. Wang, Youjin; Zhou, Weiyin; Alter, Blanche P; Wang, Tao; Spellman, Stephen R; Haagenson, Michael; Yeager, Meredith; Lee, Stephanie J; Chanock, Stephen J; Savage, Sharon A; Gadalla, Shahinaz M
  3. Biology of blood and marrow transplantation : journal of the American Society for Blood and Marrow Transplantation. 2018, Oct; 24(10): 2003-2008.
  1. 9.   Engaging Anaphase Catastrophe Mechanisms to Eradicate Aneuploid Cancers
  2. Kawakami, Masanori; Mustachio, Lisa Maria; Liu, Xi; Dmitrovsky, Ethan
  3. Molecular Cancer Therapeutics. 2018, Apr; 17(4): 724-731.
  1. 10.   Impediment of Replication Forks by Long Non-coding RNA Provokes Chromosomal Rearrangements by Error-Prone Restart
  2. Watanabe, Takaaki; Marotta, Michael; Suzuki, Ryusuke; Diede, Scott J; Tapscott, Stephen J; Niida, Atsushi; Chen, Jack; Mouakkad, Lila; Kondratova, Anna; Giuliano, Armando E; Orsulic, Sandra; Tanaka, Hisashi
  3. Cell reports. 2017, Nov 21; 21(8): 2223-2235.
  1. 11.   X Chromosome Evolution in Cetartiodactyla
  2. Proskuryakova, Anastasia A; Kulemzina, Anastasia I; Perelman, Polina L; Makunin, Alexey I; Larkin, Denis M; Farré, Marta; Kukekova, Anna V; Lynn Johnson, Jennifer; Lemskaya, Natalya A; Beklemisheva, Violetta R; Roelke-Parker, Melody; Bellizzi, June; Ryder, Oliver A; O'Brien, Stephen J; Graphodatsky, Alexander S
  3. Genes. 2017, Sep; 8(9): pii: E216.
  1. 12.   PAX3-FOXO1 Establishes Myogenic Super Enhancers and Confers BET Bromodomain Vulnerability
  2. Gryder, Berkley E.; Yohe, Marielle E.; Chou, Hsien-Chao; Zhang, Xiaohu; Marques, Joana; Wachtel, Marco; Schaefer, Beat; Sen, Nirmalya; Song, Young; Gualtieri, Alberto; Pomella, Silvia; Rota, Rossella; Cleveland, Abigail; Wen, Xinyu; Sindiri, Sivasish; Wei, Jun S.; Barr, Frederic G.; Das, Sudipto; Andresson, Thorkell; Guha, Rajarshi; Lal-Nag, Madhu; Ferrer, Marc; Shern, Jack F.; Zhao, Keji; Thomas, Craig J.; Khan, Javed
  3. Cancer Discovery. 2017, Aug; 7(8): 884-899.
  1. 13.   Genetic variation in nucleotide excision repair pathway genes, pesticide exposure and prostate cancer risk
  2. Barry, K. H.; Koutros, S.; Andreotti, G.; Sandler, D. P.; Burdette, L. A.; Yeager, M.; Freeman, L. E. B.; Lubin, J. H.; Ma, X. M.; Zheng, T. Z.; Alavanja, M. C. R.; Berndt, S. I.
  3. Carcinogenesis. 2012, Feb; 33(2): 331-337.
  1. 14.   Tumors Induced in Mice by Direct Inoculation of Plasmid DNA Expressing Both Activated H-ras and c-myc
  2. Sheng-Fowler, L.; Cai, F.; Fu, H. Q.; Zhu, Y.; Orrison, B.; Foseh, G.; Blair, D. G.; Hughes, S. H.; Coffin, J. M.; Lewis, A. M.; Peden, K.
  3. International Journal of Biological Sciences. 2010, Mar 29; 6(2): 151-162.
  1. 15.   Hematopoietic Immortalizing Function of the NKL-Subclass Homeobox Gene TLX1
  2. Renn, L. A. Z.; Hawley, T. S.; Burkett, S.; Ramezani, A.; Riz, I.; Adlers, R. L.; Hickstein, D. D.; Hawley, R. G.
  3. Genes Chromosomes & Cancer. 2010, Feb; 49(2): 119-131.
  1. 16.   Artifacts of the 1.9x Feline Genome Assembly Derived from the Feline-Specific Satellite Sequence
  2. Pontius, J. U.; O'Brien, S. J.
  3. Journal of Heredity. 2009 100: S14-S18.
  1. 17.   The Interaction of NSBP1/HMGN5 with Nucleosomes in Euchromatin Counteracts Linker Histone-Mediated Chromatin Compaction and Modulates Transcription
  2. Rochman, M.; Postnikov, Y.; Correll, S.; Malicet, C.; Wincovitch, S.; Karpova, T. S.; McNally, J. G.; Wu, X. L.; Bubunenko, N. A.; Grigoryev, S.; Bustin, M.
  3. Molecular Cell. 2009 35(5): 642-656.
  1. 18.   DNA palindromes with a modest arm length of greater than or similar to s20 base pairs are a significant target for recombinant adeno-associated virus vector integration in the liver, muscles, and heart in mice
  2. Inagaki, K.; Lewis, S. M.; Wu, X. L.; Ma, C. R.; Munroe, D. J.; Fuess, S.; Storm, T. A.; Kay, M. A.; Nakai, H.
  3. Journal of Virology. 2007, Oct; 81(20): 11290-11303.
  1. 19.   High mobility group box-1 protein induces the migration and activation of human dendritic cells and acts as an alarmin
  2. Yang, D.; Chen, Q.; Yang, H.; Tracey, K. J.; Bustin, M.; Oppenheim, J. J.
  3. Journal of Leukocyte Biology. 2007, Jan; 81(1): 59-66.
  1. 20.   Cigarette smoking, N-acetyltransferase genes and the risk of advanced colorectal adenoma
  2. Moslehi, R.; Chatterjee, N.; Church, T. R.; Chen, J.; Yeager, M.; Weissfeld, J.; Hein, D. W.; Hayes, R. B.
  3. Pharmacogenomics. 2006, Sep; 7(6): 819-829.
  1. 21.   Sleeping beauty: a novel cancer gene discovery tool
  2. Dupuy, A. J.; Jenkins, N. A.; Copeland, N. G.
  3. Human Molecular Genetics. 2006, Apr; 15: R75-R79.
  1. 22.   Risk for HIV-1 infection associated with a common CXCL12 (SDF1) polymorphism and CXCR4 variation in an African population
  2. Petersen, D. C.; Glashoff, R. H.; Shrestha, S.; Bergeron, J.; Laten, A.; Gold, B.; van Rensburg, E. J.; Dean, M.; Hayes, V. M.
  3. Jaids-Journal of Acquired Immune Deficiency Syndromes. 2005, DEC 15; 40(5): 521-526.
  1. 23.   Molecular alterations in primary prostate cancer after androgen ablation therapy
  2. Best, C. J. M.; Gillespie, J. W.; Yi, Y. J.; Chandramouli, G. V. R.; Perlmutter, M. A.; Gathright, Y.; Erickson, H. S.; Georgevich, L.; Tangrea, M. A.; Duray, P. H.; Gonzalez, S.; Velasco, A.; Linehan, W. M.; Matusik, R. J.; Price, D. K.; Figg, W. D.; Emmert-Buck, M. R.; Chuaqui, R. F.
  3. Clinical Cancer Research. 2005, OCT 1; 11(19, Part 1): 6823-6834.
  1. 24.   Genetic variation, nucleotide diversity, and linkage disequilibrium in seven telomere stability genes suggest that these genes may be under constraint
  2. Savage, S. A.; Stewart, B. J.; Eckert, A.; Kiley, M.; Liao, J. S.; Chanock, S. J.
  3. Human Mutation. 2005, OCT; 26(4): 343-350.
  1. 25.   A rhesus macaque radiation hybrid map and comparative analysis with the human genome
  2. Murphy, W. J.; Agarwala, R.; Schaffer, A. A.; Stephens, R.; Smith, C.; Crumpler, N. J.; David, V. A.; O'Brien, S. J.
  3. Genomics. 2005, OCT; 86(4): 383-395.
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