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  1. 1.   Flexible pri-miRNA structures enable tunable production of 5' isomiRs
  2. Bofill De Ros,Xavier; Hong,Zhenyi; Birkenfeld, Ben; Alamo-Ortiz,Sarangelica; Yang,Acong; Dai,Lisheng; Gu,Shuo
  3. RNA Biology. 2022, Jan; 19(1): 279-289.
  1. 2.   Structural basis for Dicer-like function of an engineered RNase III variant and insights into the reaction trajectory of two-Mg2+-ion catalysis
  2. Dharavath,Sudhaker; Shaw,Gary; Ji,Xinhua
  3. RNA Biology. 2022, Jan; 19(1): 908-915.
  1. 3.   Structural insights into the function of the catalytically active human Taspase1
  2. Nagaratnam, Nirupa; Delker, Silvia L.; Jernigan, Rebecca; Edwards, Thomas E.; Snider, Janey; Thifault, Darren; Williams, Dewight; Nannenga, Brent L.; Stofega, Mary; Sambucetti, Lidia; Hsieh, James J.; Flint,Andrew; Fromme, Petra; Martin-Garcia, Jose M.
  3. Structure. 2021, Aug 5; 29(8): 873-+.
  1. 4.   The indenoisoquinoline LMP517: a novel antitumor agent targeting both TOP1 and TOP2
  2. Marzi, Laetitia; Sun, Yilun; Huang, Shar-Yin N; James,Amy; Difilippantonio,Simone; Pommier, Yves
  3. Molecular cancer therapeutics. 2020, AUG; 19(8): 1589-1597.
  1. 5.   Two independent routes of post-translational chemistry in fluorescent protein FusionRed
  2. Muslinkina,Liya; Pletnev, Vladimir Z; Pletneva, Nadya V; Ruchkin, Dmitry A; Kolesov, Danila V; Bogdanov, Alexey M; Kost, Lubov A; Rakitina, Tatiana V; Agapova, Yulia K; Shemyakina, Irina I; Chudakov, Dmitry M; Pletnev, Sergei
  3. International journal of biological macromolecules. 2020, JUL 15; 155: 551-559.
  1. 6.   Molecular dynamics based improvement of the solubilizing self-cleavable tag Zbasic-?I-CM application in the preparation of recombinant proteins in Escherichia coli
  2. Luo, Han; Hu, Lifu; Ma,Buyong; Zhao, Meiqi; Luo, Manyu; Deng, Qing; Deng, Shaorong; Ye, Hao; Lin, Tong; Chen, Junsheng; Wang, Tao; Zhu, Jianwei; Lu, Huili
  3. Biochemical and biophysical research communications. 2019, MAY 28; 513(2): 412-418.
  1. 7.   Intermolecular disulfide bonds between unpaired cysteines retard the C-terminal trans-cleavage of Npu DnaE
  2. Xu, Yanran; Zhang, Lei; Ma, Buyong; Hu, Lifu; Lu, Huili; Dou, Tonglu; Chen, Junsheng; Zhu, Jianwei
  3. Enzyme and Microbial Technology. 2018, Nov; 118: 6-12.
  1. 8.   Structure of a eukaryotic RNase III postcleavage complex reveals a double-ruler mechanism for substrate selection
  2. Liang, Y. H.; Lavoie, M.; Comeau, M. A.; Abou Elela, S.; Ji, X.
  3. Molecular Cell. 2014, 8-May; 54(3): 431-44.
  1. 9.   Stabilization of ribozyme-like cis-noncoding rRNAs induces apoptotic and nonapoptotic death in lung cells
  2. Gee, M.; Gu, Y.; Fields, J. R.; Shiao, Y. H.
  3. Cell Death & Disease. 2012, Mar; 3
  1. 10.   Guide RNA biogenesis involves a novel RNase III family endoribonuclease in Trypanosoma brucei
  2. Madina, B. R.; Kuppan, G.; Vashisht, A. A.; Liang, Y. H.; Downey, K. M.; Wohlschlegel, J. A.; Ji, X. H.; Sze, S. H.; Sacchettini, J. C.; Read, L. K.; Cruz-Reyes, J.
  3. Rna-a Publication of the Rna Society. 2011, Oct; 17(10): 1821-1830.
  1. 11.   Transgenic mice expressing caspase-6-derived N-terminal fragments of mutant huntingtin develop neurologic abnormalities with predominant cytoplasmic inclusion pathology composed largely of a smaller proteolytic derivative
  2. Tebbenkamp, A. T. N.; Green, C.; Xu, G. L.; Denovan-Wright, E. M.; Rising, A. C.; Fromholt, S. E.; Brown, H. H.; Swing, D.; Mandel, R. J.; Tessarollo, L.; Borchelt, D. R.
  3. Human Molecular Genetics. 2011, Jul; 20(14): 2770-2782.
  1. 12.   The TY3 Gag3 Spacer Controls Intracellular Condensation and Uncoating
  2. Clemens, K.; Larsen, L.; Zhang, M.; Kuznetsov, Y.; Bilanchone, V.; Randall, A.; Harned, A.; DaSilva, R.; Nagashima, K.; McPherson, A.; Baldi, P.; Sandmeyer, S.
  3. Journal of Virology. 2011, Apr; 85(7): 3055-3066.
  1. 13.   Single genome sequencing of HIV-1 gag and protease resistance mutations at virologic failure during the OK04 trial of simplified versus standard maintenance therapy
  2. McKinnon, J. E.; Delgado, R.; Pulido, F.; Shao, W.; Arribas, J. R.; Mellors, J. W.
  3. Antiviral Therapy. 2011 16(5): 725-732.
  1. 14.   Structural determinants of tobacco vein mottling virus protease substrate specificity
  2. Sun, P.; Austin, B. P.; Tozser, J.; Waugh, D. S.
  3. Protein Science. 2010, Nov; 19(11): 2240-2251.
  1. 15.   Development of a Validated Immunofluorescence Assay for gamma H2AX as a Pharmacodynamic Marker of Topoisomerase I Inhibitor Activity
  2. Kinders, R. J.; Hollingshead, M.; Lawrence, S.; Ji, J. P.; Tabb, B.; Bonner, W. M.; Pommier, Y.; Rubinstein, L.; Evrard, Y. A.; Parchment, R. E.; Tomaszewski, J.; Doroshow, J. H.; Natl Canc Inst Phase 0 Clinical, T.
  3. Clinical Cancer Research. 2010, Nov; 16(22): 5447-5457.
  1. 16.   Histone yH2AX and Poly(ADP-Ribose) as Clinical Pharmacodynamic Biomarkers
  2. Redon, C. E.; Nakamura, A. J.; Zhang, Y. W.; Ji, J. P.; Bonner, W. M.; Kinders, R. J.; Parchment, R. E.; Doroshow, J. H.; Pommier, Y.
  3. Clinical Cancer Research. 2010, Sep; 16(18): 4532-4542.
  1. 17.   Proteomic Analysis of Nuclei Isolated from Cancer Cell Lines Treated with Indenoisoquinoline NSC 724998, a Novel Topoisomerase I Inhibitor
  2. Han, B. N.; Stockwin, L. H.; Hancock, C.; Yu, S. X.; Hollingshead, M. G.; Newton, D. L.
  3. Journal of Proteome Research. 2010, Aug 6; 9(8): 4016-4027.
  1. 18.   BUD22 Affects Ty1 Retrotransposition and Ribosome Biogenesis in Saccharomyces cerevisiae
  2. Dakshinamurthy, A.; Nyswaner, K. M.; Farabaugh, P. J.; Garfinkel, D. J.
  3. Genetics. 2010, Aug; 185(4): 1193-U99.
  1. 19.   A Novel Molecular Mechanism of Dual Resistance to Nucleoside and Nonnucleoside Reverse Transcriptase Inhibitors
  2. Nikolenko, G. N.; Delviks-Frankenberry, K. A.; Pathak, V. K.
  3. Journal of Virology. 2010, May; 84(10): 5238-5249.
  1. 20.   Polymorphisms in Gag spacer peptide 1 confer varying levels of resistance to the HIV-1 maturation inhibitor bevirimat
  2. Adamson, C. S.; Sakalian, M.; Salzwedel, K.; Freed, E. O.
  3. Retrovirology. 2010, Apr; 7: 8.
  1. 21.   The capsid-spacer peptide 1 Gag processing intermediate is a dominant-negative inhibitor of HIV-1 maturation
  2. Checkley, M. A.; Luttge, B. G.; Soheilian, F.; Nagashima, K.; Freed, E. O.
  3. Virology. 2010, Apr; 400(1): 137-144.
  1. 22.   Understanding Blue-to-Red Conversion in Monomeric Fluorescent Timers and Hydrolytic Degradation of Their Chromophores
  2. Pletnev, S.; Subach, F. V.; Dauter, Z.; Wlodawer, A.; Verkhusha, V. V.
  3. Journal of the American Chemical Society. 2010, Feb; 132(7): 2243-2253.
  1. 23.   Matriptase/epithin participates in mammary epithelial cell growth and morphogenesis through HGF activation
  2. Lee, S. L.; Huang, P. Y.; Roller, P.; Cho, E. G.; Park, D.; Dickson, R. B.
  3. Mechanisms of Development. 2010, Jan-Feb; 127(1-2): 82-95.
  1. 24.   The Early Years of Retroviral Protease Crystal Structures
  2. Miller, M.
  3. Biopolymers. 2010 94(4): 521-529.
  1. 25.   Impact of Human Immunodeficiency Virus Type 1 Resistance to Protease Inhibitors on Evolution of Resistance to the Maturation Inhibitor Bevirimat (PA-457)
  2. Adamson, C. S.; Waki, K.; Ablan, S. D.; Salzwedel, K.; Freed, E. O.
  3. Journal of Virology. 2009 83(10): 4884-4894.
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