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  1. 1.   The human oral microbiome and risk of colorectal cancer within three prospective cohort studies in the United States
  2. Vogtmann, Emily; Yano, Yukiko; Zouiouich, Semi; Hua,Xing; Wan, Yunhu; Purandare, Vaishnavi; Li, Shilan; Dagnall,Casey; Jones, Kristine; Hicks,Belynda; Hutchinson,Amy; Caporaso, J Gregory; Wheeler, William; Huang, Wen-Yi; Freedman, Neal D; Sandler, Dale P; Beane Freeman, Laura E; Liao, Linda M; Gail, Mitchell H; Shi, Jianxin; Abnet, Christian C; Sinha, Rashmi
  3. Cancer. 2025, Mar 15; 131(6): e35802.
  1. 2.   Associations Between Mosaic Loss of Sex Chromosomes and Incident Hospitalization for Atrial Fibrillation in the United Kingdom
  2. Lim, Jungeun; Hubbard, Aubrey K; Blechter, Batel; Shi, Jianxin; Zhou,Weiyin; Loftfield, Erikka; Machiela, Mitchell J; Wong, Jason Y Y
  3. Journal of the American Heart Association. 2024, Nov 19; 13(22): e036984.
  1. 3.   Factors affecting Kaposi's sarcoma-associated herpesvirus transmission in rural Ugandan households, a longitudinal study
  2. Sabourin, Katherine R; Marshall, Vickie A; Eaton, Will; Kimono, Beatrice; Mugisha, Joseph; Miley, Wendell J; Labo, Nazzarena; Samayoa-Reyes, Gabriela; Whitby, Denise; Rochford, Rosemary; Newton, Robert
  3. Infectious Agents and Cancer. 2024, Oct 03; 19(1): 49.
  1. 4.   Temporal dynamics and drivers of durable HIV viral load suppression and persistent high- and low-level viraemia during Universal Test and Treat scale-up in Uganda: a population-based study
  2. Rosen, Joseph Gregory; Ssekubugu, Robert; Chang, Larry W; Ssempijja,Victor; Galiwango, Ronald M; Ssekasanvu, Joseph; Ndyanabo, Anthony; Kisakye, Alice; Nakigozi, Gertrude; Rucinski, Katherine B; Patel, Eshan U; Kennedy, Caitlin E; Nalugoda, Fred; Kigozi, Godfrey; Ratmann, Oliver; Nelson, Lisa J; Mills, Lisa A; Kabatesi, Donna; Tobian, Aaron A R; Quinn, Thomas C; Kagaayi, Joseph; Reynolds, Steven J; Grabowski, Mary Kathryn
  3. Journal of the International AIDS Society. 2024, Feb; 27(2): e26200.
  1. 5.   Biomarkers of gut barrier dysfunction and risk of hepatocellular carcinoma in the REVEAL-HBV and REVEAL-HCV Cohort Studies
  2. Petrick, Jessica L; Florio, Andrea A; Zen, Jane; Wang, Yanyu; Gewirtz, Andrew T; Pfeiffer, Ruth M; Loftus,Sarah; Inglefield,Jon; Koshiol, Jill; Yang, Baiyu; Yu, Kelly; Hildesheim, Allan; Chen, Chien-Jen; Yang, Hwai-I; Lee, Mei-Hsuan; McGlynn, Katherine A
  3. International Journal of Cancer. 2023, Mar 06;
  1. 6.   The All of Us Research Program: Data quality, utility, and diversity
  2. Ramirez, Andrea H; Sulieman, Lina; Schlueter, David J; Halvorson, Alese; Qian, Jun; Ratsimbazafy, Francis; Loperena, Roxana; Mayo, Kelsey; Basford, Melissa; Deflaux, Nicole; Muthuraman, Karthik N; Natarajan, Karthik; Kho, Abel; Xu, Hua; Wilkins, Consuelo; Anton-Culver, Hoda; Boerwinkle, Eric; Cicek, Mine; Clark, Cheryl R; Cohn, Elizabeth; Ohno-Machado, Lucila; Schully, Sheri D; Ahmedani, Brian K; Argos, Maria; Cronin, Robert M; O'Donnell, Christopher; Fouad, Mona; Goldstein, David B; Greenland, Philip; Hebbring, Scott J; Karlson, Elizabeth W; Khatri, Parinda; Korf, Bruce; Smoller, Jordan W; Sodeke, Stephen; Wilbanks, John; Hentges, Justin; Mockrin,Stephen; Lunt, Christopher; Devaney, Stephanie A; Gebo, Kelly; Denny, Joshua C; Carroll, Robert J; Glazer, David; Harris, Paul A; Hripcsak, George; Philippakis, Anthony; Roden, Dan M
  3. Patterns (New York, N.Y.). 2022, Aug 12; 3(8): 100570.
  1. 7.   Environmental determinants of Kaposi's sarcoma-associated herpesvirus (KSHV) transmission in rural Uganda (ENDKU study): Contributions to research on KSHV infection and reactivation in African children; A longitudinal cohort study
  2. Sabourin, Katherine R; Nalwoga, Angela; Whitby,Denise; Newton, Robert; Rochford, Rosemary
  3. Cancer Epidemiology. 2022, Apr 02; 78: 102154.
  1. 8.   Development of inapparent dengue associated with increased antibody levels to Aedes aegypti salivary proteins: a longitudinal dengue cohort in Cambodia
  2. Manning, Jessica E; Chea, Sophana; Parker, Daniel M; Bohl, Jennifer A; Lay, Sreyngim; Mateja,Allyson; Man, Somnang; Nhek, Sreynik; Ponce, Aiyana; Sreng, Sokunthea; Kong, Dara; Kimsan, Soun; Meneses, Claudio; Fay, Michael P; Suon, Seila; Huy, Rekol; Lon, Chanthap; Leang, Rithea; Oliveira, Fabiano
  3. The Journal of Infectious Diseases. 2021, Oct 27;
  1. 9.   Coronavirus Occurrence in the Household Influenza Vaccine Evaluation (HIVE) Cohort of Michigan Households: Reinfection Frequency and Serologic Responses to Seasonal and Severe Acute Respiratory Syndrome Coronaviruses
  2. Petrie, Joshua G.; Bazzi, Latifa A.; McDermott, Adrian B.; Follmann, Dean; Esposito,Dom; Hatcher, Christian; Mateja,Allyson; Narpala, Sandeep R.; O'Connell, Sarah E.; Martin, Emily T.; Monto, Arnold S.
  3. The Journal of Infectious Diseases. 2021, Jul 2; 224: 49-59.
  1. 10.   Prevalence and Predictors of Persistent Human Immunodeficiency Virus Viremia and Viral Rebound After Universal Test and Treat: A Population-Based Study
  2. Grabowski, M. Kate; Patel, Eshan U.; Nakigozi, Gertrude; Ssempijja,Victor; Ssekubugu, Robert; Ssekasanvu, Joseph; Ndyanabo, Anthony; Kigozi, Godfrey; Nalugoda, Fred; Gray, Ronald H.; Kalibbala, Sarah; Serwadda, David M.; Laeyendecker, Oliver; Wawer, Maria J.; Chang, Larry W.; Quinn, Thomas C.; Kagaayi, Joseph; Tobian, Aaron A. R.; Reynolds, Steven J.
  3. The Journal of Infectious Diseases. 2021, Apr 8; 223(7): 1150-1160.
  1. 11.   Frequency of Pathogenic Germline Variants in Cancer-Susceptibility Genes in the Childhood Cancer Survivor Study
  2. Kim, Jung; Gianferante, Matthew; Karyadi, Danielle M.; Hartley, Stephen W.; Frone, Megan N.; Luo,Wen; Robison, Leslie L.; Armstrong, Gregory T.; Bhatia, Smita; Dean,Michael; Yeager,Meredith; Zhu,Bin; Song, Lei; Sampson, Joshua N.; Yasui, Yutaka; Leisenring, Wendy M.; Brodie,Seth; de Andrade, Kelvin C.; Fortes, Fernanda P.; Goldstein, Alisa M.; Khincha, Payal P.; Machiela, Mitchell J.; McMaster, Mary L.; Nickerson, Michael L.; Oba, Leatrisse; Pemov, Alexander; Pinheiro, Maisa; Rotunno, Melissa; Santiago, Karina; Wegman-Ostrosky, Talia; Diver, W. Ryan; Teras, Lauren; Freedman, Neal D.; Hicks,Belynda; Wang,Mingyi; Jones,Kristine; Hutchinson,Amy; Dagnall,Casey; Savage, Sharon A.; Tucker, Margaret A.; Chanock, Stephen J.; Morton, Lindsay M.; Stewart, Douglas R.; Mirabello, Lisa
  3. JNCI cancer spectrum. 2021, Apr; 5(2):
  1. 12.   Frequency of Pathogenic Germline Variants in Cancer-Susceptibility Genes in Patients With Osteosarcoma
  2. Mirabello, Lisa; Zhu, Bin; Koster, Roelof; Karlins,Eric; Dean, Michael; Yeager,Meredith; Gianferante, Matthew; Spector, Logan G; Morton, Lindsay M; Karyadi, Danielle; Robison, Leslie L; Armstrong, Gregory T; Bhatia, Smita; Song, Lei; Pankratz, Nathan; Pinheiro, Maisa; Gastier-Foster, Julie M; Gorlick, Richard; de Toledo, Silvia Regina Caminada; Petrilli, Antonio S; Patino-Garcia, Ana; Lecanda, Fernando; Gutierrez-Jimeno, Miriam; Serra, Massimo; Hattinger, Claudia; Picci, Piero; Scotlandi, Katia; Flanagan, Adrienne M; Tirabosco, Roberto; Amary, Maria Fernanda; Kurucu, Nilgün; Ilhan, Inci Ergurhan; Ballinger, Mandy L; Thomas, David M; Barkauskas, Donald A; Mejia-Baltodano, Gerardo; Valverde, Patricia; Hicks,Belynda; Zhu,Bin; Wang,Mingyi; Hutchinson,Amy; Tucker, Margaret; Sampson, Joshua; Landi, Maria T; Freedman, Neal D; Gapstur, Susan; Carter, Brian; Hoover, Robert N; Chanock, Stephen J; Savage, Sharon A
  3. JAMA oncology. 2020, Mar 19; 6(5): 724-734.
  1. 13.   IonStar enables high-precision, low-missing-data proteomics quantification in large biological cohorts
  2. Shen, Xiaomeng; Shen, Shichen; Li, Jun; Hu, Qiang; Nie, Lei; Tu, Chengjian; Wang, Xue; Poulsen, David J; Orsburn, Ben; Wang, Jianmin; Qu, Jun
  3. Proceedings of the National Academy of Sciences of the United States of America. 2018, May 22; 115(21): E4767-E4776.
  1. 14.   Rates of switching to second-line antiretroviral therapy and impact of delayed switching on immunologic, virologic, and mortality outcomes among HIV-infected adults with virologic failure in Rakai, Uganda.
  2. Ssempijja, Victor; Nakigozi, Gertrude; Chang, Larry; Gray, Ron; Wawer, Maria; Ndyanabo, Anthony; Kasule, Jingo; Serwadda, David; Castelnuovo, Barbara; Hoog, Anja Van't; Reynolds, Steven James
  3. BMC infectious diseases. 2017, Aug 22; 17(1): 582.
  1. 15.   Interactions between breast cancer susceptibility loci and menopausal hormone therapy in relationship to breast cancer in the Breast and Prostate Cancer Cohort Consortium
  2. Gaudet, M. M.; Barrdahl, M.; Lindstrom, S.; Travis, R. C.; Auer, P. L.; Buring, J. E.; Chanock, S. J.; Eliassen, A. H.; Gapstur, S. M.; Giles, G. G.; Gunter, M.; Haiman, C.; Hunter, D. J.; Joshi, A. D.; Kaaks, R.; Khaw, K. T.; Lee, I. M.; Le March, L.; Milne, R. L.; Peeters, P. H.; Sund, M.; Tamimi, R.; Trichopoulou, A.; Weiderpass, E.; Yang, X. R.; Prentice, R. L.; Feigelson, H. S.; Canzian, F.; Kraft, P.
  3. Breast Cancer Research and Treatment. 2016, Feb; 155(3): 531-40.
  1. 16.   Impact of Circulating Vitamin D Binding Protein Levels on the Association between 25-Hydroxyvitamin D and Pancreatic Cancer Risk: A Nested Case-Control Study
  2. Weinstein, S. J.; Stolzenberg-Solomon, R. Z.; Kopp, W.; Rager, H.; Virtamo, J.; Albanes, D.
  3. Cancer Research. 2012, Mar; 72(5): 1190-1198.
  1. 17.   Estrogen Metabolism and Risk of Breast Cancer in Postmenopausal Women
  2. Fuhrman, B. J.; Schairer, C.; Gail, M. H.; Boyd-Morin, J.; Xu, X.; Sue, L. Y.; Buys, S. S.; Isaacs, C.; Keefer, L. K.; Veenstra, T. D.; Berg, C. D.; Hoover, R. N.; Ziegler, R. G.
  3. Journal of the National Cancer Institute. 2012, Feb; 104(4): 326-339.
  1. 18.   Improved imputation of common and uncommon SNPs with a new reference set
  2. Wang, Z. M.; Jacobs, K. B.; Yeager, M.; Hutchinson, A.; Sampson, J.; Chatterjee, N.; Albanes, D.; Berndt, S. I.; Chung, C. C.; Diver, W. R.; Gapstur, S. M.; Teras, L. R.; Haiman, C. A.; Henderson, B. E.; Stram, D.; Deng, X.; Hsing, A. W.; Virtamo, J.; Eberle, M. A.; Stone, J. L.; Purdue, M. P.; Taylor, P.; Tucker, M.; Chanock, S. J.
  3. Nature Genetics. 2012, Jan; 44(1): 6-7.
  1. 19.   Genetic Variation in Base Excision Repair Pathway Genes, Pesticide Exposure, and Prostate Cancer Risk
  2. Barry, K. H.; Koutros, S.; Bemdt, S. I.; Andreotti, G.; Hoppin, J. A.; Sandler, D. P.; Burdette, L. A.; Yeager, M.; Freeman, L. E. B.; Lubin, J. H.; Ma, X. M.; Zheng, T. Z.; Alavanja, M. C. R.
  3. Environmental Health Perspectives. 2011, Dec; 119(12): 1726-1732.
  1. 20.   Fine mapping the KLK3 locus on chromosome 19q13.33 associated with prostate cancer susceptibility and PSA levels
  2. Parikh, H.; Wang, Z. M.; Pettigrew, K. A.; Jia, J. P.; Daugherty, S.; Yeager, M.; Jacobs, K. B.; Hutchinson, A.; Burdett, L.; Cullen, M.; Qi, L. Q.; Boland, J.; Collins, I.; Albert, T. J.; Vatten, L. J.; Hveem, K.; Njolstad, I.; Cancel-Tassin, G.; Cussenot, O.; Valeri, A.; Virtamo, J.; Thun, M. J.; Feigelson, H. S.; Diver, W. R.; Chatterjee, N.; Thomas, G.; Albanes, D.; Chanock, S. J.; Hunter, D. J.; Hoover, R.; Hayes, R. B.; Berndt, S. I.; Sampson, J.; Amundadottir, L.
  3. Human Genetics. 2011, Jun; 129(6): 675-685.
  1. 21.   Sequence analysis of the shelterin telomere protection complex genes in dyskeratosis congenita
  2. Savage, S. A.; Giri, N.; Jessop, L.; Pike, K.; Plona, T.; Burdett, L.; Alter, B. P.
  3. Journal of Medical Genetics. 2011, Apr; 48(4): 285-288.
  1. 22.   Screening Low-Frequency SNPS From Genome-Wide Association Study Reveals a New Risk Allele for Progression to AIDS
  2. Le Clerc, S.; Coulonges, C.; Delaneau, O.; Van Manen, D.; Herbeck, J. T.; Limou, S.; An, P.; Martinson, J. J.; Spadoni, J. L.; Therwath, A.; Veldink, J. H.; van den Berg, L. H.; Taing, L.; Labib, T.; Mellak, S.; Montes, M.; Delfraissy, J. F.; Schachter, F.; Winkler, C.; Froguel, P.; Mullins, J. I.; Schuitemaker, H.; Zagury, J. F.
  3. Jaids-Journal of Acquired Immune Deficiency Syndromes. 2011, Mar; 56(3): 279-284.
  1. 23.   Comprehensive analysis of common genetic variation in 61 genes related to steroid hormone and insulin-like growth factor-I metabolism and breast cancer risk in the NCI breast and prostate cancer cohort consortium
  2. Canzian, F.; Cox, D. G.; Setiawan, V. W.; Stram, D. O.; Ziegler, R. G.; Dossus, L.; Beckmann, L.; Blanche, H.; Barricarte, A.; Berg, C. D.; Bingham, S.; Buring, J.; Buys, S. S.; Calle, E. E.; Chanock, S. J.; Clavel-Chapelon, F.; DeLancey, J. O. L.; Diver, W. R.; Dorronsoro, M.; Haiman, C. A.; Hallmans, G.; Hankinson, S. E.; Hunter, D. J.; Husing, A.; Isaacs, C.; Khaw, K. T.; Kolonel, L. N.; Kraft, P.; Le Marchand, L.; Lund, E.; Overvad, K.; Panico, S.; Peeters, P. H. M.; Pollak, M.; Thun, M. J.; Tjonnel, A.; Trichopoulos, D.; Tumino, R.; Yeager, M.; Hoover, R. N.; Riboli, E.; Thomas, G.; Henderson, B. E.; Kaaks, R.; Feigelson, H. S.
  3. Human Molecular Genetics. 2010, Oct; 19(19): 3873-3884.
  1. 24.   A Large Study of Androgen Receptor Germline Variants and Their Relation to Sex Hormone Levels and Prostate Cancer Risk. Results from the National Cancer Institute Breast and Prostate Cancer Cohort Consortium
  2. Lindstrom, S.; Ma, J.; Altshuler, D.; Giovannucci, E.; Riboli, E.; Albanes, D.; Allen, N. E.; Berndt, S. I.; Boeing, H.; Bueno-de-Mesquita, H. B.; Chanock, S. J.; Dunning, A. M.; Feigelson, H. S.; Gaziano, J. M.; Haiman, C. A.; Hayes, R. B.; Henderson, B. E.; Hunter, D. J.; Kaaks, R.; Kolonel, L. N.; Le Marchand, L.; Martinez, C.; Overvad, K.; Siddiq, A.; Stampfer, M.; Stattin, P.; Stram, D. O.; Thun, M. J.; Trichopoulos, D.; Tumino, R.; Virtamo, J.; Weinstein, S. J.; Yeager, M.; Kraft, P.; Freedman, M. L.
  3. Journal of Clinical Endocrinology & Metabolism. 2010, Sep; 95(9): E121-E127.
  1. 25.   Refining the Prostate Cancer Genetic Association within the JAZF1 Gene on Chromosome 7p15.2
  2. Prokunina-Olsson, L.; Fu, Y. P.; Tang, W.; Jacobs, K. B.; Hayes, R. B.; Kraft, P.; Berndt, S. I.; Wacholder, S.; Yu, K.; Hutchinson, A.; Feigelson, H. S.; Thun, M. J.; Diver, W. R.; Albanes, D.; Virtamo, J.; Weinstein, S.; Schumacher, F. R.; Cancel-Tassin, G.; Cussenot, O.; Valeri, A.; Andriole, G. L.; Crawford, E. D.; Haiman, C. A.; Henderson, B. E.; Kolonel, L.; Le Marchand, L.; Siddiq, A.; Riboli, E.; Travis, R.; Kaaks, R.; Isaacs, W. B.; Isaacs, S. D.; Gronberg, H.; Wiklund, F.; Xu, J. F.; Vatten, L. J.; Hveem, K.; Kumle, M.; Tucker, M.; Hoover, R. N.; Fraumeni, J. F.; Hunter, D. J.; Thomas, G.; Chatterjee, N.; Chanock, S. J.; Yeager, M.
  3. Cancer Epidemiology Biomarkers & Prevention. 2010, May; 19(5): 1349-1355.
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