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  1. 1.   Structural basis of substrate specificity in human cytidine deaminase family APOBEC3s
  2. Hou, Shurong; Lee, Jeong Min; Myint,Wazo; Matsuo,Hiroshi; Yilmaz, Nese Kurt; Schiffer, Celia A.
  3. Journal of Biological Chemistry. 2021, Aug; 297(2):
  1. 2.   Crystal structure of a soluble APOBEC3G variant suggests ssDNA to bind in a channel that extends between the two domains
  2. Maiti,Atanu; Myint,Wazo; Frankenberry,Krista; Hou, Shurong; Kanai,Tapan; Balachandran,Vanivilasini; Sierra Rodriguez, Christina; Tripathi, Rashmi; Kurt Yilmaz, Nese; Pathak,Vinay; Schiffer, Celia A; Matsuo,Hiroshi
  3. Journal of molecular biology. 2020, Nov 20; 432(23): 6042-6060.
  1. 3.   Ascorbic Acid Promotes KIR Demethylation during Early NK Cell Differentiation
  2. Wu, Cheng-Ying; Zhang, Bin; Kim, Hansol; Anderson,Steve; Miller, Jeffrey S; Cichocki, Frank
  3. Journal of immunology (Baltimore, Md. : 1950). 2020, SEP 15; 205(6): 1513-1523.
  1. 4.   Structural Analysis of the Active Site and DNA Binding of Human Cytidine Deaminase APOBEC3B
  2. Hou, Shurong; Silvas, Tania V.; Leidner, Florian; Nalivaika, Ellen A.; Matsuo,Hiroshi; Yilmaz, Nese Kurt; Schiffer, Celia A.
  3. JOURNAL OF CHEMICAL THEORY AND COMPUTATION. 2019, Jan 8; 15(1): 637-647.
  1. 5.   Acetylation of Cytidine in mRNA Promotes Translation Efficiency
  2. Arango, Daniel; Sturgill, David; Alhusaini, Najwa; Dillman, Allissa A.; Sweet, Thomas J.; Hanson, Gavin; Hosogane, Masaki; Sinclair, Wilson R.; Nanan, Kyster K.; Mandler, Mariana D.; Fox,Stephen; Zengeya, Thomas T.; Andresson,Thorkell; Meier,Jordan; Coller, Jeffery; Oberdoerffer, Shalini
  3. CELL. 2018, Dec 13; 175(7): 1872-1886.e24.
  1. 6.   Lsh/HELLS regulates self-renewal/proliferation of neural stem/progenitor cells
  2. Han, Yixing; Ren, Jianke; Lee, Eunice; Xu, Xiaoping; Yu, Weishi; Muegge, Kathrin
  3. SCIENTIFIC REPORTS. 2017, Apr 25; 7(1): 1136.
  1. 7.   HIV-1 and HIV-2 Vif interact with human APOBEC3 proteins using completely different determinants
  2. Smith, J. L.; Izumi, T.; Borbet, T. C.; Hagedorn, A. N.; Pathak, V. K.
  3. Journal of Virology. 2014, 1-Sep; 88(17): 9893-908.
  1. 8.   Lsh participates in DNA methylation and silencing of stem cell genes
  2. Xi, S.; Geiman, T. M.; Briones, V.; Guang Tao, Y.; Xu, H.; Muegge, K.
  3. Stem Cells. 2009, Nov; 27(11): 2691-702.
  1. 9.   Extensive variation between inbred mouse strains due to endogenous L1 retrotransposition
  2. Akagi, K.; Li, J. F.; Stephens, R. M.; Volfovsky, N.; Symer, D. E.
  3. Genome Research. 2008 18(6): 869-880.
  1. 10.   2 '-deoxy-N4-[2-(4-nitrophenyl)ethoxycarbonyl]-5-azacytidine: A novel inhibitor of DNA methyltransferase that requires activation by human carboxylesterase
  2. Byun, H. M.; Choi, S. H.; Laird, P. W.; Trinh, B.; Siddiqui, M. A.; Marquez, V. E.; Yang, A. S.
  3. Cancer Letters. 2008 266(2): 238-248.
  1. 11.   Biophysical studies of DNA modified with conformationally constrained nucleotides: comparison of 2 '-exo (north) and 3 '-exo (south) 'locked' templates
  2. Maderia, M.; Shenoy, S.; Van, Q. N.; Marquez, V. E.; Barchi, J. J.
  3. Nucleic Acids Research. 2007, Mar; 35(6): 1978-1991.
  1. 12.   Structural and dynamical classification of RNA single-base bulges for nanostructure design
  2. Hastings, W. A.; Yingling, Y. G.; Chirikjian, G. S.; Shapiro, B. A.
  3. Journal of Computational and Theoretical Nanoscience. 2006, FEB; 3(1): 63-77.
  1. 13.   Metabolic activation of zebularine, a novel DNA methylation inhibitor, in human bladder carcinoma cells
  2. Ben-Kasus, T.; Ben-Zvi, Z.; Marquez, V. E.; Kelley, J. A.; Agbaria, R.
  3. Biochemical Pharmacology. 2005, JUL 1; 70(1): 121-133.
  1. 14.   Germline BHD-mutation spectrum and phenotype analysis of a large cohort of families with Birt-Hogg-Dube syndrome
  2. Schmidt, L. S.; Nickerson, M. L.; Warren, M. B.; Glenn, G. M.; Toro, J. R.; Merino, M. J.; Turner, M. L.; Choyke, P. L.; Sharma, N.; Peterson, J.; Morrison, P.; Maher, E. R.; Walther, M. M.; Zbar, B.; Linehan, W. M.
  3. American Journal of Human Genetics. 2005, JUN; 76(6): 1023-1033.
  1. 15.   Enhancement of antineoplastic action of 5-aza-2'-deoxycytidine by zebularine on L1210 leukemia
  2. Lemaire, M.; Momparler, L. F.; Bernstein, M. L.; Marquez, V. E.; Momparler, R. L.
  3. Anti-Cancer Drugs. 2005, MAR; 16(3): 301-308.
  1. 16.   Zebularine: A unique molecule for an epigenetically based strategy in cancer chemotherapy
  2. Marquez, V. E.; Kelley, J. A.; Agbaria, R.; Ben-Kasus, T.; Cheng, J. C.; Yoo, C. B.; Jones, P. A.
  3. Therapeutic Oligonucleotides: Transcriptional and Translational Strategies for Silencing Gene Expression. 2005; 1058 : 246-254.
  1. 17.   Zebularine: A unique molecule for an epigenetically based strategy in cancer chemotherapy. The magic of its chemistry and biology
  2. Marquez, V. E.; Barchi, J. J.; Kelley, J. A.; Rao, K. V. R.; Agbaria, R.; Ben-Kasus, T.; Cheng, J. C.; Yoo, C. B.; Jones, P. A.
  3. Nucleosides Nucleotides & Nucleic Acids. 2005 24(5-7, Sp. Iss.): 305-318.
  1. 18.   A method for cloning and sequencing long palindromic DNA junctions
  2. Rattray, A. J.
  3. Nucleic Acids Research. 2004, NOV 8; 32(19): published online-published online.
  1. 19.   APOBEC3G genetic variants and their influence on the progression to AIDS
  2. An, P.; Bleiber, G.; Duggal, P.; Nelson, G.; May, M.; Mangeat, B.; Alobwede, I.; Trono, D.; Vlahov, D.; Donfield, S.; Goedert, J. J.; Phair, J.; Buchbinder, S.; O'Brien, S. J.; Telenti, A.; Winkler, C. A.
  3. Journal of Virology. 2004, OCT; 78(20): 11070-11076.
  1. 20.   Zebularine induces and sustains DNA cytosine demethylation in human cancer cells
  2. Jones, P. A.; Cheng, J. C.; Yoo, C.; Liang, G. N.; Marquez, V. E.
  3. Abstracts of Papers of the American Chemical Society. 2004, AUG 22; 228(Part 1): 163-MEDI, Abstract U937-163-MEDI, Abstract U937.
  1. 21.   Preferential response of cancer cells to zebularine
  2. Cheng, J. C.; Yoo, C. B.; Weisenberger, D. J.; Chuang, J.; Wozniak, C.; Liang, G. N.; Marquez, V. E.; Greer, S.; Orntoft, T. F.; Thykjaer, T.; Jones, P. A.
  3. Cancer Cell. 2004, AUG; 6(2): 151-158.
  1. 22.   Caught in the act: visualization of an intermediate in the DNA base-flipping pathway induced by Hhal methyltransferase
  2. Horton, J. R.; Ratner, G.; Banavali, N. K.; Huang, N.; Choi, Y.; Maier, M. A.; Marquez, V. E.; Mackerell, A. D.; Cheng, X. D.
  3. Nucleic Acids Research. 2004 32(13): 3877-3886.
  1. 23.   Lsh, an epigenetic guardian of repetitive elements
  2. Huang, J. Q.; Fan, T.; Yan, Q. S.; Zhu, H. M.; Fox, S.; Issaq, H. J.; Best, L.; Gangi, L.; Munroe, D.; Muegge, K.
  3. Nucleic Acids Research. 2004 32(17): 5019-5028.
  1. 24.   PROSIT: Pseudo-Rotational Online Service and Interactive Tool, applied to a conformational survey of nucleosides and nucleotides
  2. Sun, G.; Voigt, J. H.; Filippov, I. V.; Marquez, V. E.; Nicklaus, M. C.
  3. Journal of Chemical Information and Computer Sciences. 2004, SEP-OCT; 44(5): 1752-1762.
  1. 25.   Potent inhibition of HhaI DNA methylase by the aglycon of 2-(1H)-pyrimidinone riboside (Zebularine) at the G(C)under-barGC recognition domain
  2. Marquez, V. E.; Eritja, R.; Kelley, J. A.; Vanbemmel, D.; Christman, J.
  3. THERAPEUTIC OLIGONUCLEOTIDES. 2003; 1002 : 154-164.
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