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  1. 1.   Widespread distribution of transcriptionally active, clonally expanded, HIV-1 proviruses despite suppressive antiretroviral therapy
  2. Imamichi, Hiromi; Natarajan,Venkatachala; Scrimieri,Francesca; Smith, Mindy; Badralmaa,Yunden; Bosche,Marjorie; Hensien, Jack M; Buerkert, Thomas; Sherman,Brad; Sherman, Brad T; Singh, Kanal; Lane, H Clifford
  3. The Journal of Clinical Investigation. 2025, Apr 22;
  1. 2.   Soluble CD13 is a potential mediator of neutrophil-induced thrombogenic inflammation in SARS-CoV-2 infection
  2. Tsou, Pei-Suen; Ali, Ramadan A; Lu, Chenyang; Sule, Gautam; Carmona-Rivera, Carmelo; Lucotti, Serena; Ikari, Yuzo; Wu, Qi; Campbell, Phillip; Gurrea-Rubio, Mikel; Maeda, Kohei; Fox, Sharon E; Brodie, William D; Mattichak, Megan N; Foster, Caroline; Tambralli, Ajay; Yalavarthi, Srilakshmi; Amin, M Asif; Kmetova, Katarina; Mazetto Fonseca, Bruna; Chong, Emily; Zuo, Yu; Maile, Michael; Imberti, Luisa; Caruso, Arnaldo; Caccuri, Francesca; Quaresima, Virginia; Sottini, Alessandra; Kuhns,Douglas; Fink,Danielle; Castagnoli, Riccardo; Delmonte, Ottavia; Kenney, Heather; Zhang, Yu; Magliocco, Mary; Su, Helen C; Notarangelo, Luigi D; Zemans, Rachel L; Mao-Draayer, Yang; Matei, Irina; Salvatore, Mirella; Lyden, David C; Kanthi, Yogendra; Kaplan, Mariana J; Knight, Jason S; Fox, David A
  3. JCI Insight. 2025, Apr 01;
  1. 3.   Distinct allosteric networks in CDK4 and CDK6 in the cell cycle and in drug resistance
  2. Zhang,Wengang; Bradburn, Devin; Heidebrink, Gretchen; Liu, Yonglan; Jang,Hyunbum; Nussinov,Ruth; Kõivomägi, Mardo
  3. Journal of Molecular Biology. 2025, Mar 31; 169121.
  1. 4.   Circulating cell-free Nucleic Acid Detection for W. bancrofti infections
  2. Salazar, Marisa; Schaughency,Paul; Nutman, Thomas B; Bennuru, Sasisekhar
  3. The Journal of Infectious Diseases. 2025, Mar 17;
  1. 5.   The human oral microbiome and risk of colorectal cancer within three prospective cohort studies in the United States
  2. Vogtmann, Emily; Yano, Yukiko; Zouiouich, Semi; Hua,Xing; Wan, Yunhu; Purandare, Vaishnavi; Li, Shilan; Dagnall,Casey; Jones, Kristine; Hicks,Belynda; Hutchinson,Amy; Caporaso, J Gregory; Wheeler, William; Huang, Wen-Yi; Freedman, Neal D; Sandler, Dale P; Beane Freeman, Laura E; Liao, Linda M; Gail, Mitchell H; Shi, Jianxin; Abnet, Christian C; Sinha, Rashmi
  3. Cancer. 2025, Mar 15; 131(6): e35802.
  1. 6.   ShiftScan: A tool for rapid analysis of high-throughput differential scanning fluorimetry data and compound prioritization
  2. Waterworth, Samantha C; Shenoy, Shilpa R; Sharma, Nirmala D; Wolcott,Chris; Donohue,Duncan; O'Keefe,Barry; Beutler,John
  3. Protein Science : a publication of the Protein Society. 2025, Mar; 34(3): e70055.
  1. 7.   Allosteric modulation of NF1 GAP: Differential distributions of catalytically competent populations in loss-of-function and gain-of-function mutants
  2. Xu,Liang; Jang,Hyunbum; Nussinov,Ruth
  3. Protein Science : a publication of the Protein Society. 2025, Feb; 34(2): e70042.
  1. 8.   Drug-Linker Constructs Bearing Unique Dual-Mechanism Tubulin Binding Payloads Tethered through Cleavable and Non-Cleavable Linkers
  2. Ford, Jacob W; VanNatta, Jennifer M; Mondal, Deboprosad; Lin, Chen-Ming; Deng, Yuling; Bai, Ruoli; Hamel,Ernest; Trawick, Mary Lynn; Pinney, Kevin G
  3. Tetrahedron. 2025, Feb 01; 171
  1. 9.   Functional assays for the diagnosis of chronic granulomatous disease
  2. Long-Priel,Debra; Lau,Karen; Fink,Dani; Kuhns,Doug
  3. Journal of Immunological Methods. 2025, Jan 28; 113820.
  1. 10.   Metabolic dependency mapping identifies Peroxiredoxin 1 as a driver of resistance to ATM inhibition
  2. Li, Haojian; Furusawa, Takashi; Cavero, Renzo; Xiao, Yunjie; Chari,Raj; Wu,Xiaolin; Sun, David; Hartmann, Oliver; Dhall, Anjali; Holewinski,Ronald; Andresson,Thorkell; Karim,Baktiar; Villamor-Payà, Marina; Gallardo, Devorah; Day, Chi-Ping; Pal, Lipika R; Nair, Nishanth Ulhas; Ruppin, Eytan; Aladjem, Mirit I; Pommier, Yves; Diefenbacher, Markus E; Lim, Jung Mi; Levine, Rodney L; Stracker, Travis H; Weyemi, Urbain
  3. Redox Biology. 2025, Jan 19; 80: 103503.
  1. 11.   Chronic Low-Level IFN-gamma Expression Disrupts Mitochondrial Complex I Activity in Renal Macrophages: An Early Mechanistic Driver of Lupus Nephritis Pathogenesis
  2. Bae, Heekyong R; Shin, Su-Kyung; Lee, Ji-Yoon; Ko, Yeo Jin; Kim, Suntae; Young,Howard; Kwon, Eun-Young
  3. International Journal of Molecular Sciences. 2024, Dec 25; 26(1):
  1. 12.   Corneal and conjunctival abnormalities in a cohort of survivors from the Western African Ebola virus disease outbreak
  2. Fashina, Tolulope; Nguyen, Nam V; Huang, Ye; Randleman, Casey; Hartley, Caleb D; Mattia, John G; Vandy, Matthew J; Harrison-Williams, Lloyd C; Mustapha, Jalikatu; Mwanza, Jean-Claude; Hayek, Brent R; Crozier,Ian; Shantha, Jessica G; Yeh, Steven
  3. AJO International. 2024, Dec 11; 1(4):
  1. 13.   Associations Between Mosaic Loss of Sex Chromosomes and Incident Hospitalization for Atrial Fibrillation in the United Kingdom
  2. Lim, Jungeun; Hubbard, Aubrey K; Blechter, Batel; Shi, Jianxin; Zhou,Weiyin; Loftfield, Erikka; Machiela, Mitchell J; Wong, Jason Y Y
  3. Journal of the American Heart Association. 2024, Nov 19; 13(22): e036984.
  1. 14.   Design, Synthesis and Biological Evaluation of 2-Phenyl Indole Analogues of OXi8006 as Colchicine Site Inhibitors of Tubulin Polymerization and Vascular Disrupting Agents
  2. Vairin, Rebecca; Tamminga, Caleb; Shi, Zhe; Borchardt, Christian; Jambulapati, Jayaram; Bai, Ruoli; Wanniarachchi, Hashini; Bueno, Lorena; Hamel,Ernest; Mason, Ralph P; Trawick, Mary Lynn; Pinney, Kevin G
  3. Bioorganic & Medicinal Chemistry. 2024, Nov 07; 118: 117981.
  1. 15.   Human Cripto-1 and Cripto-3 Protein Expression in Normal and Malignant Settings That Conflicts with Established Conventions
  2. Cuttitta,Frank; García-Sanmartín, Josune; Feng,Yang; Sunday, Mary Elizabeth; Kim, Young S; Martínez, Alfredo
  3. Cancers. 2024, Oct 23; 16(21):
  1. 16.   Potent and broad HIV-1 neutralization in fusion peptide-primed SHIV-infected macaques
  2. Wang, Hua; Cheng, Cheng; Dal Santo, James L; Shen, Chen-Hsiang; Bylund, Tatsiana; Henry, Amy R; Howe, Colin A; Hwang, Juyun; Morano, Nicholas C; Morris, Daniel J; Pletnev, Sergei; Roark, Ryan S; Zhou, Tongqing; Hansen, Bryan T; Hoyt, Forrest H; Johnston, Timothy S; Wang, Shuyi; Zhang, Baoshan; Ambrozak, David R; Becker, Jordan E; Bender, Michael F; Changela, Anita; Chaudhary, Ridhi; Corcoran, Martin; Corrigan, Angela R; Foulds, Kathryn E; Guo, Yicheng; Lee, Myungjin; Li, Yingying; Lin, Bob C; Liu, Tracy; Louder, Mark K; Mandolesi, Marco; Mason, Rosemarie D; McKee, Krisha; Nair, Vinod; O'Dell, Sijy; Olia, Adam S; Ou, Li; Pegu, Amarendra; Raju, Nagarajan; Rawi, Reda; Roberts-Torres, Jesmine; Sarfo, Edward K; Sastry, Mallika; Schaub, Andrew J; Schmidt, Stephen D; Schramm, Chaim A; Schwartz, Cindi L; Smith, Sarah C; Stephens,Tyler; Stuckey, Jonathan; Teng, I-Ting; Todd, John-Paul; Tsybovsky,Yaroslav; Van Wazer, David J; Wang, Shuishu; Doria-Rose, Nicole A; Fischer, Elizabeth R; Georgiev, Ivelin S; Karlsson Hedestam, Gunilla B; Sheng, Zizhang; Woodward, Ruth A; Douek, Daniel C; Koup, Richard A; Pierson, Theodore C; Shapiro, Lawrence; Shaw, George M; Mascola, John R; Kwong, Peter D
  3. Cell. 2024, Oct 23;
  1. 17.   Frameshift mutation spectra overlap between constitutional mismatch repair deficiency tumors and Lynch syndrome tumors
  2. Song,Yurong; Baugher,Ryan; Young,Todd; Somerville,Brandon; Mori,Yuriko; Pinto,Ligia; Nichols, Kim E; Shoemaker, Robert H
  3. The Journal of Clinical Investigation. 2024, Oct 22;
  1. 18.   Multi-objective latent space optimization of generative molecular design models
  2. Abeer, A N M Nafiz; Urban, Nathan M; Weil,Michael; Alexander, Francis J; Yoon, Byung-Jun
  3. Patterns (New York, N.Y.). 2024, Oct 11; 5(10): 101042.
  1. 19.   Self-extinguishing relay waves enable homeostatic control of human neutrophil swarming
  2. Strickland, Evelyn; Pan, Deng; Godfrey, Christian; Kim, Julia S; Hopke, Alex; Ji, Wencheng; Degrange,Maureen; Villavicencio, Bryant; Mansour, Michael K; Zerbe, Christa S; Irimia, Daniel; Amir, Ariel; Weiner, Orion D
  3. Developmental Cell. 2024, Oct 7; 59(19): 2659-2671.
  1. 20.   Severe Clinical Phenotypes of Heterozygous Females With X-Linked Chronic Granulomatous Disease
  2. Patel, Niraj C; Younger, M Elizabeth M; Williams, Kelli; Matias Lopes, Joao Pedro; Kuhns,Doug; Patel, Meera N; Miranda, Mary Ann; Marciano, Beatriz E; Deal, Christin Lawler; Leiding, Jennifer W
  3. The journal of Allergy and Clinical Immunology. In Practice. 2024, Sep 25;
  1. 21.   A novel pathogenic germline chromosome 3 inversion in von Hippel-Lindau disease
  2. Vocke, Cathy D; Ricketts, Christopher J; Pack, Svetlana; Raffeld, Mark; Hewitt, Stephen; Lebensohn, Alexandra P; O'Brien, Lidenys; Gautam, Rabindra; Reynolds, Krista; Schmidt,Laura; Choo, Kristin; Kenigsberg, Alex; Gurram, Sandeep; Chew, Emily Y; Nilubol, Naris; Chittaboina, Prashant; Merino, Maria J; Ball, Mark W; Linehan, W Marston
  3. Journal of Medical Genetics. 2024, Sep 24;
  1. 22.   Glycemic Control in Diabetic Patients Improved Overall Lung Cancer Survival across Diverse Populations
  2. Wu, Yi-Hung; Luke,Brian; Wu, Xiao-Cheng; Lee, J Jack; Yi, Yong; Okpechi,Samuel; Gause,Barry; Mehta, Paras; Sherman, Steven I; Ochoa, Augusto; Dmitrovsky,Ethan; Liu,Xi
  3. JNCI Cancer Spectrum. 2024, Sep 12;
  1. 23.   Solvent organization in the ultrahigh-resolution crystal structure of crambin at room temperature
  2. Chen, Julian C H; Gilski, Miroslaw; Chang, Changsoo; Borek, Dominika; Rosenbaum, Gerd; Lavens, Alex; Otwinowski, Zbyszek; Kubicki, Maciej; Dauter, Zbigniew; Jaskolski, Mariusz; Joachimiak, Andrzej
  3. IUCrJ. 2024, Sep 01; 11(Pt 5): 649-663.
  1. 24.   Single-nucleus RNA sequencing reveals loss of DCT1 renal tubules in HIV Vpr transgenic mice
  2. Latt, Khun Zaw; Yoshida, Teruhiko; Shrivastav, Shashi; Abedini, Amin; Reece, Jeff M; Sun, Zeguo; Lee, Hewang; Okamoto, Koji; Dagur, Pradeep; Ishimoto, Yu; Heymann, Jurgen; Zhao,Yongmei; Chung, Joon-Yong; Hewitt, Stephen; Jose, Pedro A; Lee, Kyung; He, John Cijiang; Winkler,Cheryl; Knepper, Mark A; Kino, Tomoshige; Rosenberg, Avi Z; Susztak, Katalin; Kopp, Jeffrey B
  3. The American Journal of Pathology. 2024, Jul 18;
  1. 25.   Ex vivo culture resting time impacts transplantation outcomes of genome-edited human hematopoietic stem and progenitor cells in xenograft mouse models
  2. Demirci, Selami; Khan,Muhammad; Hinojosa, Gabriela; Le, Anh; Leonard, Alexis; Essawi, Khaled; Gudmundsdottir, Bjorg; Liu, Xiong; Zeng, Jing; Inam, Zaina; Chu, Rebecca; Uchida, Naoya; Araki, Daisuke; London, Evan; Butt, Henna; Maitland, Stacy A; Bauer, Daniel E; Wolfe, Scot A; Larochelle, Andre; Tisdale, John F
  3. Cytotherapy. 2024, Jun ; 26(6): 641-648.
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