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  1. 1.   Circulating cell-free Nucleic Acid Detection for W. bancrofti infections
  2. Salazar, Marisa; Schaughency,Paul; Nutman, Thomas B; Bennuru, Sasisekhar
  3. The Journal of Infectious Diseases. 2025, Mar 17;
  1. 2.   Olaparib in treatment-refractory isocitrate dehydrogenase 1 (IDH1)- and IDH2-mutant cholangiocarcinoma: Safety and antitumor activity from the phase 2 National Cancer Institute 10129 trial
  2. Cecchini, Michael; Pilat, Mary Jo; Uboha, Nataliya; Azad, Nilofer S; Cho, May; Davis, Elizabeth J; Ahnert, Jordi Rodon; Tinoco, Gabriel; Shapiro, Geoffrey I; Khagi, Simon; Powers, Benjamin; Spencer, Kristen; Groisberg, Roman; Drappatz, Jan; Chen, Li; Das,Bishu; Bao, Xun; Li, Jing; Narayan, Azeet; Vu, Dennis; Patel, Abhijit; Niger, Monica; Doroshow, Deborah; Durecki, Diane; Boerner, Scott A; Bindra, Ranjit; Ivy, Percy; Shyr, Derek; Shyr, Yu; LoRusso, Patricia M
  3. Cancer. 2025, Feb 15; 131(4): e35755.
  1. 3.   Affinity Tag-Free Purification of SARS-CoV-2 N Protein and Its Crystal Structure in Complex with ssDNA
  2. Maiti,Atanu; Matsuo,Hiroshi
  3. Biomolecules. 2024, Nov 30; 14(12):
  1. 4.   Tissue-Specific DNA Methylation Changes in CD8+ T Cells During Chronic Simian Immunodeficiency Virus Infection of Infant Rhesus Macaques
  2. Nag,Mukta; Fogle, Jonathan E; Pillay, Santhoshan; Del Prete,Greg; De Paris, Kristina
  3. Viruses. 2024, Nov 27; 16(12):
  1. 5.   A Multiplexed Real-Time PCR Assay for Simultaneous Quantification of Human Immunodeficiency Virus and Hepatitis B Virus for Low-And-Middle- Income Countries
  2. Bocar, Fofana Djeneba; Aminatou, Coulibaly; Mamoudou, Maiga; Nguyen,Thuy; Joel, Gozlan; Zoumana, Diarra; Amadou, Koné; Yacouba, Cissoko; Issiaka, Maiga Almoustapha; Claudia, Hawkins A; Robert, Murphy L; Morand-Joubert, Laurence; Mahamadou, Diakité; Jane, Holl L; Sally, McFall M
  3. Journal of Virological Methods. 2024, Sep 02; 330: 115026.
  1. 6.   Escherichia coli grown in inexpensive conical flat-bottom polypropylene tubes produce a high level of pUC vector
  2. Marquez,Mayra; Chen,Qian; Cachaco,Silvia; Yang,Jun; Sui,Hongyan; Imamichi,Tomozumi
  3. Journal of Microbiological Methods. 2024, Jul 14; 224: 106990.
  1. 7.   Aberrant spliceosome activity via elevated intron retention and upregulation and phosphorylation of SF3B1 in chronic lymphocytic leukemia
  2. Kashyap, Manoj Kumar; Karathia,Hiren; Kumar, Deepak; Vera Alvarez, Roberto; Forero-Forero, Jose Vicente; Moreno, Eider; Lujan, Juliana Velez; Amaya-Chanaga, Carlos Ivan; Vidal, Newton Medeiros; Yu, Zhe; Ghia, Emanuela M; Lengerke-Diaz, Paula A; Achinko, Daniel; Choi, Michael Y; Rassenti, Laura Z; Mariño-Ramírez, Leonardo; Mount, Stephen M; Hannenhalli, Sridhar; Kipps, Thomas J; Castro, Januario E
  3. Molecular Therapy. Nucleic acids. 2024, Jun 11; 35(2): 102202.
  1. 8.   Olaparib for childhood tumors harboring defects in DNA damage repair genes: arm H of the NCI-COG Pediatric MATCH trial
  2. Glade Bender, Julia L; Pinkney, Kerice; Williams,Mickey; Roy-Chowdhuri, Sinchita; Patton, David R; Coffey, Brent D; Reid, Joel M; Piao, Jin; Saguilig, Lauren; Alonzo, Todd A; Berg, Stacey L; Ramirez, Nilsa C; Fox, Elizabeth; Weigel, Brenda J; Hawkins, Douglas S; Mooney, Margaret M; Takebe, Naoko; Tricoli, James V; Janeway, Katherine A; Seibel, Nita L; Parsons, Donald W
  3. The Oncologist. 2024, May 30;
  1. 9.   Cationic Residues of the HIV-1 Nucleocapsid Protein Enable DNA Condensation to Maintain Viral Core Particle Stability during Reverse Transcription
  2. Gien, Helena; Morse, Michael; McCauley, Micah J; Rouzina, Ioulia; Gorelick,Robert; Williams, Mark C
  3. Viruses. 2024, May 29; 16(6): 872.
  1. 10.   African ancestry-derived APOL1 risk genotypes show proximal epigenetic associations
  2. Breeze, Charles E; Lin, Bridget M; Winkler,Cheryl; Franceschini, Nora
  3. BMC Genomics. 2024, May 08; 25(1): 452.
  1. 11.   DNAJC9 prevents CENP-A mislocalization and chromosomal instability by maintaining the fidelity of histone supply chains
  2. Balachandra, Vinutha; Shrestha, Roshan L; Hammond, Colin M; Lin, Shinjen; Hendriks, Ivo A; Sethi, Subhash Chandra; Chen, Lu; Sevilla, Samantha; Caplen, Natasha J; Chari,Raj; Karpova, Tatiana S; McKinnon, Katherine; Todd, Matthew Am; Koparde,Vishal; Cheng, Ken Chih-Chien; Nielsen, Michael L; Groth, Anja; Basrai, Munira A
  3. The EMBO Journal. 2024, Apr 10;
  1. 12.   Metabolism-focused CRISPR screen unveils mitochondrial pyruvate carrier 1 as a critical driver for PARP inhibitor resistance in lung cancer
  2. Furusawa, Takashi; Cavero, Renzo; Liu, Yue; Li, Haojian; Xu,Xia; Andresson,Thorkell; Reinhold, William; White, Olivia; Boufraqech, Myriem; Meyer,Thomas; Hartmann, Oliver; Diefenbacher, Markus E; Pommier, Yves; Weyemi, Urbain
  3. Molecular Carcinogenesis. 2024, Feb 27;
  1. 13.   Immunostimulation of Fibrous Nucleic Acid Nanoparticles Can be Modulated through Aptamer-Based Functional Moieties: Unveiling the Structure-Activity Relationship and Mechanistic Insights
  2. Rebolledo, Laura P; Ke, Weina; Cedrone,Edward; Wang, Jian; Majithia, Krishna; Johnson, M Brittany; Dokholyan, Nikolay V; Dobrovolskaia,Marina; Afonin, Kirill A
  3. ACS Applied Materials & Interfaces. 2024, Feb 12;
  1. 14.   Mismatch repair protein MLH1 suppresses replicative stress in BRCA2 deficient breast tumors
  2. Sengodan,Satheesh; Hu, Xiaoju; Peddibhotla, Vaishnavi; Balamurugan, Kuppusamy; Mitrophanov,Alex; McKennett,Lois; Kharat, Suhas S; Sanawar, Rahul; Singh, Vinod Kumar; Albaugh,Mary; Burkett,Sandra; Zhao,Yongmei; Tran,Bao; Malys,Tyler; Sterneck,Esta; De, Subhajyoti; Sharan,Shyam
  3. The Journal of Clinical Investigation. 2024, Jan 25; 134(7):
  1. 15.   Insights into the mechanisms and structure of breakage-fusion-bridge cycles in cervical cancer using long-read sequencing
  2. Rodriguez, Isabel; Rossi, Nicole M; Keskus, Ayse G; Xie, Yi; Ahmad, Tanveer; Bryant, Asher; Lou,Hong; Paredes, Jesica Godinez; Milano, Rose; Rao, Nina; Tulsyan, Sonam; Boland, Joseph F; Luo,Wen; Liu,Jia; O'Hanlon, Tim; Bess, Jazmyn; Mukhina, Vera; Gaykalova, Daria; Yuki, Yuko; Malik, Laksh; Billingsley, Kimberley J; Blauwendraat, Cornelis; Carrington, Mary; Yeager,Meredith; Mirabello, Lisa; Kolmogorov, Mikhail; Dean, Michael
  3. American Journal of Human Genetics. 2024, Jan 25;
  1. 16.   MoCoLo: a testing framework for motif co-localization
  2. Xu, Qi; Del Mundo, Imee M A; Zewail-Foote, Maha; Luke,Brian; Vasquez, Karen M; Kowalski, Jeanne
  3. Briefings in Bioinformatics. 2024, Jan 22; 25(2):
  1. 17.   Analysis of Nanoparticles' Potential to Induce Autoimmunity
  2. Neun,Barry; Potter,Tim; Robinson,Christina; Difilippantonio,Simone; Edmondson,Elijah; Dobrovolskaia,Marina
  3. Methods in Molecular Biology (Clifton, N.J.). 2024 2789: 121-127.
  1. 18.   Pharmacodynamic effects of the PARP inhibitor talazoparib (MDV3800, BMN 673) in patients with BRCA-mutated advanced solid tumors
  2. Mittra, Arjun; Coyne, Geraldine H O' Sullivan; Zlott, Jennifer; Kummar, Shivaani; Meehan, Robert; Rubinstein, Lawrence; Juwara,Lamin; Wilsker,Deborah; Ji,Jay; Miller,Brandon; Navas, Tony; Ferry-Galow,Katherine; Voth,Andrea; Chang,Ting-Chia; Jiwani,Shahanawaz; Parchment,Ralph; Doroshow, James H; Chen, Alice P
  3. Cancer Chemotherapy and Pharmacology. 2023, Nov 27;
  1. 19.   Sequencing-based functional assays for classification of BRCA2 variants in mouse ESCs
  2. Biswas,Kajal; Mitrophanov,Alex; Sahu,Sounak; Sullivan,Teresa; Southon,Eileen; Nousome,Darryl; Reid, Susan; Narula, Sakshi; Smolen, Julia; Sengupta, Trisha; Riedel-Topper, Maximilian; Kapoor, Medha; Babbar, Anav; Stauffer,Stacey; Cleveland, Linda; Tandon, Mayank; Malys,Tyler; Sharan,Shyam
  3. Cell Reports Methods. 2023, Nov 20; 3(11): 100628.
  1. 20.   1H, 15N, 13C resonance assignments for proteasome shuttle factor hHR23a
  2. Chen,Xiang; Walters,Kylie
  3. Biomolecular NMR Assignments. 2023, Oct 09;
  1. 21.   Enhancing Anti-SARS-CoV-2 Neutralizing Immunity by Genetic Delivery of Enveloped Virus-like Particles Displaying SARS-CoV-2 Spikes
  2. Yang, Yongping; Kong, Wing-Pui; Liu, Cuiping; Ruckwardt, Tracy J; Tsybovsky,Yaroslav; Wang, Lingshu; Wang, Shuishu; Biner, Daniel W; Chen, Man; Liu, Tracy; Merriam, Jonah; Olia, Adam S; Ou, Li; Qiu, Qi; Shi, Wei; Stephens,Tyler; Yang, Eun Sung; Zhang, Baoshan; Zhang, Yi; Zhou, Qiong; Rawi, Reda; Koup, Richard A; Mascola, John R; Kwong, Peter D
  3. Vaccines. 2023, Aug 31; 11(9):
  1. 22.   Pan-cancer analysis of post-translational modifications reveals shared patterns of protein regulation
  2. Geffen, Yifat; Anand, Shankara; Akiyama, Yo; Yaron, Tomer M; Song, Yizhe; Johnson, Jared L; Govindan, Akshay; Babur, Özgün; Li, Yize; Huntsman, Emily; Wang, Liang-Bo; Birger, Chet; Heiman, David I; Zhang, Qing; Miller, Mendy; Maruvka, Yosef E; Haradhvala, Nicholas J; Calinawan, Anna; Belkin, Saveliy; Kerelsky, Alexander; Clauser, Karl R; Krug, Karsten; Satpathy, Shankha; Payne, Samuel H; Mani, D R; Gillette, Michael A; Dhanasekaran, Saravana M; Thiagarajan,Mathangi; Mesri, Mehdi; Rodriguez, Henry; Robles, Ana I; Carr, Steven A; Lazar, Alexander J; Aguet, François; Cantley, Lewis C; Ding, Li; Getz, Gad
  3. Cell. 2023, Aug 09;
  1. 23.   Evaluation of Nonmodified Wireframe DNA Origami for Acute Toxicity and Biodistribution in Mice
  2. Wamhoff, Eike-Christian; Knappe, Grant A; Burds, Aurora A; Du, Rebecca R; Neun,Barry; Difilippantonio,Simone; Sanders,Chelsea; Edmondson,Elijah; Matta,Jennifer; Dobrovolskaia,Marina; Bathe, Mark
  3. ACS Applied Bio Materials. 2023, Apr 11;
  1. 24.   DNA methylation age in paired tumor and adjacent normal breast tissue in Chinese women with breast cancer
  2. Koka, Hela; Bodelon, Clara; Horvath, Steve; Lee, Priscilla Ming Yi; Wang,Difei; Song,Lei; Zhang, Tongwu; Hurson, Amber N; Guida, Jennifer Lyn; Zhu, Bin; Bailey-Whyte, Maeve; Wang, Feng; Wu, Cherry; Tsang, Koon Ho; Tsoi, Yee-Kei; Chan, W C; Law, Sze Hong; Hung, Ray Ka Wai; Tse, Gary M; Yuen, Karen Ka-Wan; Karlins, Eric; Jones,Kristine; Vogt,Aurelie; Zhu, Bin; Hutchinson,Amy; Hicks,Belynda; Garcia-Closas, Montserrat; Chanock, Stephen; Barnholtz-Sloan, Jill; Tse, Lap Ah; Yang, Xiaohong R
  3. Clinical Epigenetics. 2023, Mar 30; 15(1): 55.
  1. 25.   AI-driven drug repurposing and binding pose meta dynamics identifies novel targets for monkeypox virus
  2. Patel,Chiragkumar; Mall, Raghvendra; Bensmail, Halima
  3. Journal of Infection and Public Health. 2023, Mar 15; 16(5): 799-807.
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