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  1. 1.   T cell reactivity to the SARS-CoV-2 Omicron variant is preserved in most but not all individuals
  2. Naranbhai, Vivek; Nathan, Anusha; Kaseke, Clarety; Berrios, Cristhian; Khatri, Ashok; Choi, Shawn; Getz, Matthew A; Tano-Menka, Rhoda; Ofoman, Onosereme; Gayton, Alton; Senjobe, Fernando; Zhao, Zezhou; St Denis, Kerri J; Lam, Evan C; Carrington,Mary; Garcia-Beltran, Wilfredo F; Balazs, Alejandro B; Walker, Bruce D; Iafrate, A John; Gaiha, Gaurav D
  3. Cell. 2022, Feb 03; 185
  1. 2.   Evidence of SARS-CoV-2-Specific T-Cell-Mediated Myocarditis in a MIS-A Case
  2. Vannella, Kevin M; Oguz,Cihan; Stein, Sydney R; Pittaluga, Stefania; Dikoglu, Esra; Kanwal, Arjun; Ramelli, Sabrina C; Briese, Thomas; Su, Ling; Wu, Xiaolin; Ramos-Benitez, Marcos J; Perez-Valencia, Luis J; Babyak, Ashley; Cha, Nu Ri; Chung, Joon-Yong; Ylaya, Kris; Madathil, Ronson J; Saharia, Kapil K; Scalea, Thomas M; Tran, Quincy K; Herr, Daniel L; Kleiner, David E; Hewitt, Stephen M; Notarangelo, Luigi D; Grazioli, Alison; Chertow, Daniel S
  3. Frontiers in Immunology. 2021, Dec 9; 12: 779026.
  1. 3.   Structure-guided T cell vaccine design for SARS-CoV-2 variants and sarbecoviruses
  2. Nathan, Anusha; Rossin, Elizabeth J; Kaseke, Clarety; Park, Ryan J; Khatri, Ashok; Koundakjian, Dylan; Urbach, Jonathan M; Singh, Nishant K; Bashirova,Arman; Tano-Menka, Rhoda; Senjobe, Fernando; Waring, Michael T; Piechocka-Trocha, Alicja; Garcia-Beltran, Wilfredo F; Iafrate, A John; Naranbhai, Vivek; Carrington,Mary; Walker, Bruce D; Gaiha, Gaurav D
  3. Cell. 2021, Aug 19; 184(17): 4401-4413.e10.
  1. 4.   HLA class-I-peptide stability mediates CD8+ T cell immunodominance hierarchies and facilitates HLA-associated immune control of HIV
  2. Kaseke, Clarety; Park, Ryan J; Singh, Nishant K; Koundakjian, Dylan; Bashirova,Arman; Garcia Beltran, Wilfredo F; Takou Mbah, Overbeck C; Ma, Jiaqi; Senjobe, Fernando; Urbach, Jonathan M; Nathan, Anusha; Rossin, Elizabeth J; Tano-Menka, Rhoda; Khatri, Ashok; Piechocka-Trocha, Alicja; Waring, Michael T; Birnbaum, Michael E; Baker, Brian M; Carrington,Mary; Walker, Bruce D; Gaiha, Gaurav D
  3. Cell reports. 2021, Jul 13; 36(2): 109378.
  1. 5.   Computationally Optimized SARS-CoV-2 MHC Class I and II Vaccine Formulations Predicted to Target Human Haplotype Distributions
  2. Liu, Ge; Carter, Brandon; Bricken, Trenton; Jain, Siddhartha; Viard,Mathias; Carrington,Mary; Gifford, David K
  3. Cell systems. 2020, AUG 26; 11(2): 131-144.e6.
  1. 6.   Blocking a4ß7 integrin binding to SIV does not improve virologic control
  2. Iwamoto, Nami; Mason, Rosemarie D; Song, Kaimei; Gorman, Jason; Welles, Hugh C; Arthos, James; Cicala, Claudia; Min, Susie; King, Hannah A D; Belli, Aaron J; Reimann, Keith A; Foulds, Kathryn E; Kwong, Peter D; Lifson,Jeffrey; Keele,Brandon; Roederer, Mario
  3. Science (New York, N.Y.). 2019, Sep 06; 365(6457): 1033-1036.
  1. 7.   Local and global anatomy of antibody-protein antigen recognition
  2. Wang, Meryl; Zhu, David; Zhu, Jianwei; Nussinov, Ruth; Ma, Buyong
  3. Journal of Molecular Recognition: JMR. 2018, May; 31(5): e2693.
  1. 8.   Elimination of murine and human T-cell epitopes in recombinant immunotoxin eliminates neutralizing and anti-drug antibodies in vivo
  2. Mazor, Ronit; Crown, Devorah; Addissie, Selamawit; Jang, Youjin; Kaplan, Gilad; Pastan, Ira
  3. CELLULAR & MOLECULAR IMMUNOLOGY. 2017, 2017-05-01; 14(5): 432-442.
  1. 9.   Clinical Evaluation of Safety and Immunogenicity of PADRE-Cytomegalovirus (CMV) and Tetanus-CMV Fusion Peptide Vaccines With or Without PF03512676 Adjuvant
  2. La Rosa, C.; Longmate, J.; Lacey, S. F.; Kaltcheva, T.; Sharan, R.; Marsano, D.; Kwon, P.; Drake, J.; Williams, B.; Denison, S.; Broyer, S.; Couture, L.; Nakamura, R.; Kelsey, M. I.; Krieg, A. M.; Diamond, D. J.; Zaia, J. A.
  3. Journal of Infectious Diseases. 2012, Apr; 205(8): 1294-1304.
  1. 10.   HLA-A*7401-Mediated Control of HIV Viremia Is Independent of Its Linkage Disequilibrium with HLA-B*5703
  2. Matthews, P. C.; Adl, E.; Listgarten, J.; Leslie, A.; Mkhwanazi, N.; Carlson, J. M.; Harndahl, M.; Stryhn, A.; Payne, R. P.; Ogwu, A.; Huang, K. H. G.; Frater, J.; Paioni, P.; Kloverpris, H.; Jooste, P.; Goedhals, D.; van Vuuren, C.; Steyn, D.; Riddell, L.; Chen, F.; Luzzi, G.; Balachandran, T.; Ndung'u, T.; Buus, S.; Carrington, M.; Shapiro, R.; Heckerman, D.; Goulder, P. J. R.
  3. Journal of Immunology. 2011, May; 186(10): 5675-5686.
  1. 11.   Carbohydrates Contribute to the Interactions between Cockroach Allergen Bla g 2 and a Monoclonal Antibody
  2. Li, M.; Gustchina, A.; Glesner, J.; Wunschmann, S.; Vailes, L. D.; Chapman, M. D.; Pomes, A.; Wlodawer, A.
  3. Journal of Immunology. 2011, Jan; 186(1): 333-340.
  1. 12.   Effects of thymic selection of the T-cell repertoire on HLA class I-associated control of HIV infection
  2. Kosmrlj, A.; Read, E. L.; Qi, Y.; Allen, T. M.; Altfeld, M.; Deeks, S. G.; Pereyra, F.; Carrington, M.; Walker, B. D.; Chakraborty, A. K.
  3. Nature. 2010, May; 465(7296): 350-U107.
  1. 13.   Changes in T-Cell Responses Against Human Herpesvirus-8 Correlate with the Disease Course of Iatrogenic Kaposi's Sarcoma in a Patient with Undifferentiated Arthritis
  2. Barozzi, P.; Potenza, L.; Riva, G.; Vallerini, D.; Quadrelli, C.; Bosco, R.; Morselli, M.; Forghieri, F.; Volzone, F.; Rossi, G.; Ferri, C.; Bonini, C.; Ciceri, F.; Bordignon, C.; Whitby, D.; Schulz, T. F.; Torelli, G.; Luppi, M.
  3. Seminars in Arthritis and Rheumatism. 2009, Dec; 39(3): 170-175.
  1. 14.   Crystal structure of a dimerized cockroach allergen Bla g 2 complexed with a monoclonal antibody
  2. Li, M.; Gustchina, A.; Alexandratos, J.; Wlodawer, A.; Wunschmann, S.; Kepley, C. L.; Chapman, M. D.; Pomes, A.
  3. Journal of Biological Chemistry. 2008 283(33): 22806-22814.
  1. 15.   Immunization with DNA topoisomerase I induces autoimmune responses but not scleroderma-like pathologies in mice
  2. Hu, P. Q.; Hurwitz, A. A.; Oppenheim, M. J.
  3. Journal of Rheumatology. 2007, Nov; 34(11): 2243-2252.
  1. 16.   Structural mimicry of CD4 by a cross-reactive HIV-1 neutralizing antibody with CDR-H2 and H3 containing unique motifs
  2. Prabakaran, P.; Gan, J. H.; Wu, Y. Q.; Zhang, M. Y.; Dimitrov, D. S.; Ji, X. H.
  3. Journal of Molecular Biology. 2006, MAR 17; 357(1): 82-99.
  1. 17.   Control of human immunodeficiency virus replication by cytotoxic T lymphocytes targeting subdominant epitopes
  2. Frahm, N.; Kiepiela, P.; Adams, S.; Linde, C. H.; Hewitt, H. S.; Sango, K.; Feeney, M. E.; Addo, M. M.; Lichterfeld, M.; Lahaie, M. P.; Pae, E.; Wurcel, A. G.; Roach, T.; St John, M. A.; Altfeld, M.; Marincola, F. M.; Moore, C.; Mallal, S.; Carrington, M.; Heckerman, D.; Allen, T. M.; Mullins, J. I.; Korber, B. T.; Goulder, P. J. R.; Walker, B. D.; Br, er
  3. Nature Immunology. 2006, FEB; 7(2): 173-178.
  1. 18.   Potent neutralization of Hendra and Nipah viruses by human monoclonal antibodies
  2. Zhu, Z. Y.; Dimitrov, A. S.; Bossart, K. N.; Crameri, G.; Bishop, K. A.; Choudhry, V.; Mungall, B. A.; Feng, Y. R.; Choudhary, A.; Zhang, M. Y.; Feng, Y.; Wang, L. F.; Xiao, X. D.; Eaton, B. T.; Broder, C. C.; Dimitrov, D. S.
  3. Journal of Virology. 2006, JAN; 80(2): 891-899.
  1. 19.   Antibody response to a non-conserved C-terminal part of human histone deacetylase 3 in colon cancer patients
  2. Shebzukhov, Y. V.; Koroleva, E. P.; Khlgatian, S. V.; Belousov, P. V.; Kuz'mina, K. E.; Radko, B. V.; Longpre, F.; Lagarkova, M. A.; Kadachigova, T. S.; Gurova, O. V.; Meshcheryakov, A. A.; Lichinitser, M. R.; Knuth, A.; Jager, E.; Kuprash, D. V.; Nedospasov, S. A.
  3. International Journal of Cancer. 2005, DEC 10; 117(5): 800-806.
  1. 20.   Carbohydrate array analysis of anti-Tn antibodies and lectins reveals unexpected specificities: Implications for diagnostic and vaccine development
  2. Manimala, J. C.; Li, Z. T.; Jain, A.; VedBrat, S.; Gildersleeve, J. C.
  3. Chembiochem. 2005, DEC; 6(12): 2229-2241.
  1. 21.   Association of human immunodeficiency virus type 1 gag with membrane does not require highly basic sequences in the nucleocapsid: Use of a novel gag multimerization assay
  2. Ono, A.; Waheed, A. A.; Joshi, A.; Freed, E. O.
  3. Journal of Virology. 2005, NOV; 79(22): 14131-14140.
  1. 22.   Inactivation of retroviruses with preservation of structural integrity by targeting the hydrophobic domain of the viral envelope
  2. Raviv, Y.; Viard, M.; Bess, J. W.; Chertova, E.; Blumenthal, R.
  3. Journal of Virology. 2005, OCT; 79(19): 12394-12400.
  1. 23.   Regulation of human immunodeficiency virus type 1 envelope glycoprotein fusion by a membrane-interactive domain in the gp41 cytoplasmic tail
  2. Wyss, S.; Dimitrov, A. S.; Baribaud, F.; Edwards, T. G.; Blumenthal, R.; Hoxie, J. A.
  3. Journal of Virology. 2005, OCT; 79(19): 12231-12241.
  1. 24.   Crystal structure of cockroach allergen Bla g 2, an unusual zinc binding aspartic protease with a novel mode of self-inhibition
  2. Gustchina, A.; Li, M.; Wunschmann, S.; Chapman, M. D.; Pomes, A.; Wlodawer, A.
  3. Journal of Molecular Biology. 2005, APR 29; 348(2): 433-444.
  1. 25.   Reversion of CTL escape-variant immunodeficiency viruses in vivo
  2. Friedrich, T. C.; Dodds, E. J.; Yant, L. J.; Vojnov, L.; Rudersdorf, R.; Cullen, C.; Evans, D. T.; Desrosiers, R. C.; Mothe, B. R.; Sidney, J.; Sette, A.; Kunstman, K.; Wolinsky, S.; Piatak, M.; Lifson, J.; Hughes, A. L.; Wilson, N.; O'Connor, D. H.; Watkins, D. I.
  3. Nature Medicine. 2004 10(3): 275-281.
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