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  1. 1.   Co-incubation of Short Amphiphilic Peptides with Dicer Substrate RNAs Results in ß-Sheet Fibrils for Enhanced Gene Silencing in Cancer Cells
  2. Gupta, Kshitij; Parlea, Lorena; Puri,Anu; Smith, Katelyn; Puri,Anu; Bergman, Joseph T; Kim, Taejin; Shapiro,Bruce
  3. RNA Nanomed. 2024, Dec; 1(1): 61-78.
  1. 2.   Suspension electrospinning of decellularized extracellular matrix: A new method to preserve bioactivity
  2. Jones, Sarah; VandenHeuvel, Sabrina; Luengo Martinez, Andres; Birur, Ruchi; Burgeson, Eric; Gilbert, Isabelle; Baker, Aaron; Wolf,Matthew; Raghavan, Shreya A; Rogers, Simon; Cosgriff-Hernandez, Elizabeth
  3. Bioactive Materials. 2024, Nov; 41: 640-656.
  1. 3.   Producing recombinant proteins in Vibrio natriegens
  2. Smith,Matthew; Hernández, José Sánchez; Messing,Simon; Ramakrishnan,Nitya; Higgins,Brianna; Mehalko,Jennifer; Perkins,Shelley; Wall,Vanessa; Grose,Carissa; Frank,Peter; Cregger, Julia; Le,Vi; Johnson,Adam; Sherekar, Mukul; Pagonis,Morgan; Drew,Matt; Hong,Min; Widmeyer, Stephanie R T; Denson,John-Paul; Snead,Kelly; Poon,Ivy; Waybright,Tim; Champagne, Allison; Esposito,Dom; Jones,Jane; Taylor,Troy; Gillette,Bill
  3. Microbial Cell Factories. 2024, Jul 24; 23(1): 208.
  1. 4.   Systematic characterization of multi-omics landscape between gut microbial metabolites and GPCRome in Alzheimer's disease
  2. Qiu, Yunguang; Hou, Yuan; Gohel, Dhruv; Zhou, Yadi; Xu, Jielin; Bykova, Marina; Yang, Yuxin; Leverenz, James B; Pieper, Andrew A; Nussinov,Ruth; Caldwell, Jessica Z K; Brown, J Mark; Cheng, Feixiong
  3. Cell Reports. 2024, Apr 21; 43(5): 114128.
  1. 5.   A Zpr1 co-chaperone mediates folding of eukaryotic translation elongation factor 1A via a GTPase cycle
  2. McQuown, Alexander J; Nelliat, Anjali R; Reif, Dvir; Sabbarini, Ibrahim M; Membreno, Britnie Santiago; Wu,Colin; Denic, Vladimir
  3. Molecular Cell. 2023, Aug 16; 81(17): 3108-3122.
  1. 6.   E6AP AZUL interaction with UBQLN1/2 in cells, condensates, and an AlphaFold-NMR integrated structure
  2. Buel,Gwen; Chen,Xiang; Myint,Wazo; Kayode, Olumide; Folimonova,Varvara; Cruz, Anthony; Skorupka,Kate; Matsuo,Hiroshi; Walters,Kylie
  3. Structure (London, England : 1993). 2023, Feb 14; 31(4): 395-410.
  1. 7.   Zinc-finger protein Zpr1 is a bespoke chaperone essential for eEF1A biogenesis
  2. Sabbarini, Ibrahim M; Reif, Dvir; McQuown, Alexander J; Nelliat, Anjali R; Prince, Jeffrey; Santiago Membreno,Britnie; Wu,Colin; Murray, Andrew W; Denic, Vladimir
  3. Molecular Cell. 2023, Jan 19; 83(2): 252-265.
  1. 8.   Optimization of production and characterization of a recombinant soluble human Cripto-1 protein inhibiting self-renewal of cancer stem cells
  2. Afify, Said M; Hassan, Ghmkin; Nawara, Hend M; H Zahra, Maram; Xu, Yanning; Alam, Md Jahangir; Saitoh, Koichi; Mansour, Hager; Abu Quora, Hagar A; Sheta, Mona; Monzur, Sadia; Du, Juan; Oh, Sue Young; Seno, Akimasa; Salomon,David; Seno, Masaharu
  3. Journal of Cellular Biochemistry. 2022, May 16;
  1. 9.   The Mottled Capsid of the Salmonella Giant Phage SPN3US, a Likely Maturation Intermediate with a Novel Internal Shell
  2. Heymann, J Bernard; Wang, Bing; Newcomb, William W; Wu,Weimin; Winkler, Dennis C; Cheng, Naiqian; Reilly, Erin R; Hsia, Ru-Ching; Thomas, Julie A; Steven, Alasdair C
  3. Viruses. 2020, Aug 19; 12(9): pii: E910..
  1. 10.   Core remodeling leads to long wavelength fluoro-coumarins
  2. Matikonda,Siddharth; Ivanic,Joseph; Gomez, Miguel; Hammersley, Gabrielle; Schnermann,Martin
  3. CHEMICAL SCIENCE. 2020, JUL 28; 11(28): 7302-7307.
  1. 11.   A protein quality control pathway at the mitochondrial outer membrane
  2. Metzger,Meredith; Scales, Jessica L; Dunklebarger, Mitchell F; Loncarek,Jadranka; Weissman,Allan
  3. eLife. 2020, Mar 02; 9
  1. 12.   Three J-proteins impact Hsp104-mediated variant-specific prion elimination: a new critical role for a low-complexity domain
  2. Berger, Scott E.; Nolte, Anna M.; Kamiya,Erina; Hines, Justin K.
  3. Current genetics. 2020, Feb; 66(1): 51-58.
  1. 13.   Targeting the Oncogenic Long Non-coding RNA SLNCR1 by Blocking Its Sequence-Specific Binding to the Androgen Receptor
  2. Schmidt, Karyn; Weidmann, Chase A; Hilimire, Thomas A; Yee, Elaine; Hatfield, Breanne M; Schneekloth,Jay; Weeks, Kevin M; Novina, Carl D
  3. Cell reports. 2020, Jan 14; 30(2): 541-554.e5.
  1. 14.   Increased Protein Insolubility in Brains From a Subset of Patients With Schizophrenia
  2. Nucifora, Leslie G; MacDonald, Matthew L; Lee, Brian J; Peters, Matthew E; Norris, Alexis L; Orsburn, Benjamin C; Yang, Kun; Gleason, Kelly; Margolis, Russell L; Pevsner, Jonathan; Tamminga, Carol A; Sweet, Robert A; Ross, Christopher A; Sawa, Akira; Nucifora, Frederick C
  3. The American journal of psychiatry. 2019, SEP; 176(9): 730-743.
  1. 15.   Protein ensembles link genotype to phenotype
  2. Nussinov,Ruth; Tsai,Chung-Jung; Jang,Hyunbum
  3. PLoS computational biology. 2019, Jun; 15(6):
  1. 16.   Structure and energetic basis of overrepresented ? light chain in systemic light chain amyloidosis patients
  2. Zhao, Jun; Zhang, Baohong; Zhu, Jianwei; Nussinov, Ruth; Ma, Buyong
  3. Biochimica et Biophysica Acta. 2018, Jun; 1864(6 Pt B): 2294-2303.
  1. 17.   Computational Generation of RNA Nanorings.
  2. Sharan, Rishabh; Bindewald, Eckart; Kasprzak, Wojciech; Shapiro, Bruce
  3. Methods in molecular biology (Clifton, N.J.). 2017 1632: 19-32.
  1. 18.   Disordered Proteins and Network Disorder in Network Descriptions of Protein Structure, Dynamics and Function: Hypotheses and a Comprehensive Review
  2. Csermely, P.; Sandhu, K. S.; Hazai, E.; Hoksza, Z.; Kiss, H. J. M.; Miozzo, F.; Veres, D. V.; Piazza, F.; Nussinov, R.
  3. Current Protein & Peptide Science. 2012, Feb; 13(1): 19-33.
  1. 19.   Evolution-Based Design of an Injectable Hydrogel
  2. Geisler, I. M.; Schneider, J. P.
  3. Advanced Functional Materials. 2012, Feb; 22(3): 529-537.
  1. 20.   Tamalin Is a Critical Mediator of Electroconvulsive Shock-Induced Adult Neuroplasticity
  2. Yanpallewar, S. U.; Barrick, C. A.; Palko, M. E.; Fulgenzi, G.; Tessarollo, L.
  3. Journal of Neuroscience. 2012, Feb; 32(7): 2252-2262.
  1. 21.   Controlled biodegradation of Self-assembling beta-hairpin Peptide hydrogels by proteolysis with matrix metalloproteinase-13
  2. Giano, M. C.; Pochan, D. J.; Schneider, J. P.
  3. Biomaterials. 2011, Sep; 32(27): 6471-6477.
  1. 22.   Shortened Engineered Human Antibody CH2 Domains INCREASED STABILITY AND BINDING TO THE HUMAN NEONATAL Fc RECEPTOR
  2. Gong, R.; Wang, Y. P.; Feng, Y.; Zhao, Q.; Dimitrov, D. S.
  3. Journal of Biological Chemistry. 2011, Aug; 286(31): 27288-27293.
  1. 23.   Protein structure prediction using a docking-based hierarchical folding scheme
  2. Kifer, I.; Nussinov, R.; Wolfson, H. J.
  3. Proteins-Structure Function and Bioinformatics. 2011, Jun; 79(6): 1759-1773.
  1. 24.   RanBPM is essential for mouse spermatogenesis and oogenesis
  2. Puverel, S.; Barrick, C.; Dolci, S.; Coppola, V.; Tessarollo, L.
  3. Development. 2011, Jun; 138(12): 2511-2521.
  1. 25.   Peptide Structure Stabilization by Membrane Anchoring and its General Applicability to the Development of Potent Cell-Permeable Inhibitors
  2. Johannessen, L.; Remsberg, J.; Gaponenko, V.; Adams, K. M.; Barchi, J. J.; Tarasov, S. G.; Jiang, S.; Tarasova, N. I.
  3. Chembiochem. 2011, Apr; 12(6): 914-921.
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