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  1. 1.   Noncanonical circRNA biogenesis driven by alpha and gamma herpesviruses
  2. Dremel, Sarah E; Koparde,Vishal; Arbuckle, Jesse H; Hogan, Chad H; Kristie, Thomas M; Krug, Laurie T; Conrad, Nicholas K; Ziegelbauer, Joseph M
  3. The EMBO Journal. 2025, Mar 03;
  1. 2.   Allosteric modulation of NF1 GAP: Differential distributions of catalytically competent populations in loss-of-function and gain-of-function mutants
  2. Xu,Liang; Jang,Hyunbum; Nussinov,Ruth
  3. Protein Science : a publication of the Protein Society. 2025, Feb; 34(2): e70042.
  1. 3.   Improvements in large-scale production of Tobacco Etch Virus protease
  2. Messing,Simon; Barnhart,Kirsten; Drew,Matt; Granato-Guerrero,Natalie; Grose,Carissa; Higgins,Brianna; Hong,Min; Hull,Jenna; Perkins,Shelley; Poon,Ivy; Ramakrishnan,Nitya; Seabolt,Amanda; Taylor,Troy; Wall,Vanessa; Wright,Nick; Gillette,Bill; Esposito,Dom
  3. Protein Expression and Purification. 2024, Dec 14; 106648.
  1. 4.   A KSHV RNA-binding protein promotes FOS to inhibit nuclease AEN and transactivate RGS2 for AKT phosphorylation
  2. Majerciak,Vladimir; Alvarado-Hernandez, Beatriz; Ma, Yanping; Duduskar, Shivalee; Lobanov, Alexei; Cam, Maggie; Zheng,Zhi-Ming
  3. mBio. 2024, Dec 10; e0317224.
  1. 5.   Matrin3 regulates mitotic spindle dynamics by controlling alternative splicing of CDC14B
  2. Muys, Bruna R; Shrestha, Roshan L; Anastasakis, Dimitrios G; Pongor, Lorinc; Li, Xiao Ling; Grammatikakis, Ioannis; Polash, Ahsan; Chari,Raj; Gorospe, Myriam; Harris, Curtis C; Aladjem, Mirit I; Basrai, Munira A; Hafner, Markus; Lal, Ashish
  3. Cell Reports. 2023, Mar 15; 42(3): 112260.
  1. 6.   The small molecule inhibitor NAV-2729 has a complex target profile including multiple ADP-ribosylation factor regulatory proteins
  2. Rosenberg, Eric M; Jian, Xiaoying; Soubias,Olivier; Yoon, Hye-Young; Yadav, Mukesh P; Hammoudeh, Sarah; Pallikkuth, Sandeep; Akpan, Itoro; Chen, Pei-Wen; Maity, Tapan K; Jenkins, Lisa M; Yohe,Marielle; Byrd,Robert; Randazzo, Paul A
  3. The Journal of Biological Chemistry. 2023, Feb 07; 299(3): 102992.
  1. 7.   Microarray-guided evaluation of the frequency, B cell origins, and selectivity of human glycan-binding antibodies reveals new insights and novel antibodies
  2. Temme,Sebastian; Crainic, Jennifer A; Walker, Laura M; Yang, Weizhun; Tan, Zibin; Huang, Xuefei; Gildersleeve,Jeffrey
  3. The Journal of Biological Chemistry. 2022, Sep 07; 298 (10): 102468.
  1. 8.   Systematic exploration of dynamic splicing networks reveals conserved multistage regulators of neurogenesis
  2. Han, Hong; Best, Andrew J; Braunschweig, Ulrich; Mikolajewicz, Nicholas; Li, Jack Daiyang; Roth, Jonathan; Chowdhury, Fuad; Mantica, Federica; Nabeel-Shah, Syed; Parada, Guillermo; Brown, Kevin R; O'Hanlon, Dave; Wei, Jiarun; Yao, Yuxi; Zid, Abdelrahman Abou; Comsa, Lim Caden; Jen, Mark; Wang, Jenny; Datti, Alessandro; Gonatopoulos Pournatzis,Thomas; Weatheritt, Robert J; Greenblatt, Jack F; Wrana, Jeffrey L; Irimia, Manuel; Gingras, Anne-Claude; Moffat, Jason; Blencowe, Benjamin J
  3. Molecular Cell. 2022, Jul 31; 82(16): 2982-2999.
  1. 9.   Orphan G-Protein Coupled Receptor GPRC5B Is Critical for Lymphatic Development
  2. Xu, Wenjing; Nelson-Maney, Nathan P; Bálint, László; Kwon, Hyouk-Bum; Davis, Reema B; Dy, Danielle C M; Dunleavey, James M; St Croix,Brad; Caron, Kathleen M
  3. International Journal of Molecular Sciences. 2022, May 20; 23(10):
  1. 10.   Flexible pri-miRNA structures enable tunable production of 5' isomiRs
  2. Bofill De Ros,Xavier; Hong,Zhenyi; Birkenfeld, Ben; Alamo-Ortiz,Sarangelica; Yang,Acong; Dai,Lisheng; Gu,Shuo
  3. RNA Biology. 2022, Jan; 19(1): 279-289.
  1. 11.   Characterizing Expression and Regulation of Gamma-Herpesviral Circular RNAs
  2. Tagawa, Takanobu; Oh, Daniel; Santos, Jerico; Dremel, Sarah; Mahesh, Guruswamy; Uldrick, Thomas S; Yarchoan, Robert; Koparde,Vishal; Ziegelbauer, Joseph M
  3. Frontiers in microbiology. 2021, Jun 30; 12: 670542.
  1. 12.   Leukocyte chemotactic receptor Fpr1 protects against aging-related posterior subcapsular cataract formation
  2. Gao, Ji-Liang; Weaver, Joseph D.; Tuo, Jingsheng; Wang, Long Q.; Siwicki, Marie; Despres, Daryl; Lizak, Martin; Schneider, Erich H.; Kovacs, William; Maminishkis, Arvydas; Chen,Keqiang; Yoshimura, Teizo; Wang,Jiming; Chan, Chi Chao; Murphy, Philip M.
  3. FASEB Journal. 2021, Feb; 35(2):
  1. 13.   G-quadruplexes offer a conserved structural motif for NONO recruitment to NEAT1 architectural lncRNA
  2. Simko,Eric; Liu, Honghe; Zhang, Tao; Velasquez, Adan; Teli, Shraddha; Haeusler, Aaron R.; Wang, Jiou
  3. NUCLEIC ACIDS RESEARCH. 2020, JUL 27; 48(13): 7421-7438.
  1. 14.   Structural Insights into the SPRED1-Neurofibromin-KRAS Complex and Disruption of SPRED1-Neurofibromin Interaction by Oncogenic EGFR
  2. Yan,Wupeng; Markegard, Evan; Dharmaiah, Srisathiyanarayanan; Urisman, Anatoly; Drew, Matthew; Esposito,Dom; Scheffzek, Klaus; Nissley,Dwight; McCormick, Frank; Simanshu,Dhirendra
  3. Cell reports. 2020, Jul 21; 32(3): 107909.
  1. 15.   Optimization of sortase A ligation for flexible engineering of complex protein systems
  2. Li,Jess; Zhang,Yue; Soubias,Olivier; Khago,Domarin; Chao, Fa-an; Li, Yifei; Shaw, Katherine; Byrd,Robert
  3. JOURNAL OF BIOLOGICAL CHEMISTRY. 2020, FEB 28; 295(9): 2664-2675.
  1. 16.   Biochemical and structural analyses reveal that the tumor suppressor neurofibromin (NF1) forms a high-affinity dimer
  2. Sherekar,Mukul; Han, Sae-Won; Ghirlando, Rodolfo; Messing,Simon; Drew,Matt; Rabara,Dana; Waybright,Tim; Juneja, Puneet; O'Neill, Hugh; Stanley, Christopher B; Bhowmik, Debsindhu; Ramanathan, Arvind; Subramaniam,Sriram; Nissley,Dwight; Gillette,Bill; McCormick, Frank; Esposito,Dom
  3. The Journal of biological chemistry. 2020, JAN 24; 295(4): 1105-1119.
  1. 17.   Second harmonic generation detection of Ras conformational changes and discovery of a small molecule binder
  2. Donohue, Elizabeth; Khorsand, Sina; Mercado, Gabriel; Varney, Kristen M; Wilder, Paul T; Yu, Wenbo; MacKerell, Alexander D; Alexander,Patrick; Van,Que; Moree, Ben; Stephen,Andy; Weber, David J; Salafsky, Joshua; McCormick, Frank
  3. Proceedings of the National Academy of Sciences of the United States of America. 2019, Aug 27; 116(35): 17290-17297.
  1. 18.   The RNA exosome nuclease complex regulates human embryonic stem cell differentiation
  2. Belair,Cedric; Sim,Soyeong; Kim, Kun-Yong; Tanaka, Yoshiaki; Park, In-Hyun; Wolin,Sandra
  3. The Journal of cell biology. 2019, AUG; 218(8): 2564-2582.
  1. 19.   Crystal structure of the Schizosaccharomyces pombe U7BR E2-binding region in complex with Ubc7
  2. Hann, Zachary S; Metzger,Meredith; Weissman,Allan; Lima, Christopher D
  3. Acta crystallographica. Section F, Structural biology communications. 2019, Aug 01; 75(Pt 8): 552-560.
  1. 20.   Functional Expression and Characterization of Human Myristoylated-Arf1 in Nanodisc Membrane Mimetics
  2. Li, Yifei; Soubias,Olivier; Li,Jess; Sun, Shangjin; Randazzo, Paul A.; Byrd,Robert
  3. BIOCHEMISTRY. 2019, MAR 12; 58(10): 1423-1431.
  1. 21.   Disruption of the Rbm38-eIF4E Complex with a Synthetic Peptide Pep8 Increases p53 Expression
  2. Lucchesi, Christopher A.; Zhang, Jin; Ma, Buyong; Chen, Mingyi; Chen, Xinbin
  3. CANCER RESEARCH. 2019, FEB 15; 79(4): 807-818.
  1. 22.   Combined treatment with HMGN1 and anti-CD4 depleting antibody reverses T cell exhaustion and exerts robust anti-tumor effects in mice
  2. Chen, Chang-Yu; Ueha, Satoshi; Ishiwata, Yoshiro; Yokochi, Shoji; Yang,De; Oppenheim,Joost; Ogiwara, Haru; Shichino, Shigeyuki; Deshimaru, Shungo; Shand, Francis H W; Shibayama, Shiro; Matsushima, Kouji
  3. Journal for immunotherapy of cancer. 2019, Jan 29; 7(1): 21.
  1. 23.   Structure and function of Rnt1p: An alternative to RNAi for targeted RNA degradation
  2. Abou Elela, Sherif; Ji,Xinhua
  3. Wiley interdisciplinary reviews. RNA. 2019, May-Jun; 10(3):
  1. 24.   Genome-Wide Profiling of Cervical RNA-Binding Proteins Identifies Human Papillomavirus Regulation of RNASEH2A Expression by Viral E7 and E2F1
  2. Xu, Junfen; Liu, Habin; Yang, Yanqin; Wang, Xiaohong; Liu, Poching; Li, Yang; Meyers, Craig; Banerjee, Nilam Sanjib; Wang, Hsu-Kun; Cam, Maggie; Lu, Weiguo; Chow, Louise T.; Xie, Xing; Zhu, Jun; Zheng,Zhi-Ming
  3. MBIO. 2019, Jan-Feb; 10(1):
  1. 25.   RNA-Protein Interactions Prevent Long RNA Duplex Formation: Implications for the Design of RNA-Based Therapeutics
  2. Bindewald, Eckart; Dai, Lisheng; Kasprzak, Wojciech; Kim, Taejin; Gu, Shuo; Shapiro, Bruce
  3. MOLECULES. 2018, Dec; 23(12):
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