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  1. 1.   Dual infection and recombination of Kaposi sarcoma herpesvirus revealed by whole-genome sequence analysis of effusion samples
  2. Cornejo Castro,Elena; Marshall,Vickie; Lack,Justin; Lurain, Kathryn; Immonen,Taina; Labo,Nazzarena; Fisher, Nicholas C; Ramaswami, Ramya; Polizzotto, Mark N; Keele,Brandon; Yarchoan, Robert; Uldrick, Thomas S; Whitby,Denise
  3. Virus Evolution. 2020, Jul; 6(2): veaa047.
  1. 2.   Adeno-associated viral vector mediated expression of broadly-neutralizing antibodies against HIV - hitting a fast-moving target
  2. Sherpa,Chringma; Le Grice,Stuart
  3. Current HIV research. 2020, Feb 10; 18(2): 114-131.
  1. 3.   Phylogenetic inference for the study of within-host HIV-1 dynamics and persistence on antiretroviral therapy
  2. Capoferri, Adam A.; Bale,Michael; Simonetti, Francesco R.; Kearney,Mary
  3. The lancet. HIV. 2019, May; 6(5): E325-E333.
  1. 4.   Latin Americans show wide-spread Converso ancestry and imprint of local Native ancestry on physical appearance
  2. Chacon-Duque, Juan-Camilo; Adhikari, Kaustubh; Fuentes-Guajardo, Macarena; Mendoza-Revilla, Javier; Acuna-Alonzo, Victor; Barquera, Rodrigo; Quinto-Sanchez, Mirsha; Gomez-Valdes, Jorge; Everardo Martinez, Paola; Villamil-Ramirez, Hugo; Hunemeier, Tabita; Ramallo, Virginia; Silva de Cerqueira, Caio C.; Hurtado, Malena; Villegas, Valeria; Granja, Vanessa; Villena, Mercedes; Vasquez, Rene; Llop, Elena; Sandoval, Jose R.; Salazar-Granara, Alberto A.; Parolin, Maria-Laura; Sandoval, Karla; Penaloza-Espinosa, Rosenda I.; Rangel-Villalobos, Hector; Winkler, Cheryl; Klitz, William; Bravi, Claudio; Molina, Julio; Corach, Daniel; Barrantes, Ramiro; Gomes, Veronica; Resende, Carlos; Gusmao, Leonor; Amorim, Antonio; Xue, Yali; Dugoujon, Jean-Michel; Moral, Pedro; Gonzalez-Jose, Rolando; Schuler-Faccini, Lavinia; Salzano, Francisco M.; Bortolini, Maria-Catira; Canizales-Quinteros, Samuel; Poletti, Giovanni; Gallo, Carla; Bedoya, Gabriel; Rothhammer, Francisco; Balding, David; Hellenthal, Garrett; Ruiz-Linares, Andres
  3. Nature communications. 2018, Dec 19; 9(1):
  1. 5.   Comparative Population Genomics Analysis of the Mammalian Fungal Pathogen Pneumocystis
  2. Cissé, Ousmane H; Ma, Liang; Wei Huang, Da; Khil, Pavel P; Dekker, John P; Kutty, Geetha; Bishop, Lisa; Liu, Yueqin; Deng, Xilong; Hauser, Philippe M; Pagni, Marco; Hirsch, Vanessa; Lempicki, Richard A; Stajich, Jason E; Cuomo, Christina A; Kovacs, Joseph A
  3. mBio. 2018, May-Jun; 9(3): pii: e00381-18.
  1. 6.   Emerging Viruses in the Felidae: Shifting Paradigms
  2. O'Brien, S. J.; Troyer, J. L.; Brown, M. A.; Johnson, W. E.; Antunes, A.; Roelke, M. E.; Pecon-Slattery, J.
  3. Viruses-Basel. 2012, Feb; 4(2): 236-257.
  1. 7.   Characterization of the Meiosis-Specific Recombinase Dmc1 of Pneumocystis
  2. Kutty, G.; Achaz, G.; Maldarelli, F.; Varma, A.; Shroff, R.; Becker, S.; Fantoni, G.; Kovacs, J. A.
  3. Journal of Infectious Diseases. 2010, Dec; 202(12): 1920-1929.
  1. 8.   Identification and Characterization of CRF02_AG, CRF06_cpx, and CRF09_cpx Recombinant Subtypes in Mali, West Africa
  2. Imamichi, H.; Koita, O.; Dabitao, D.; Dao, S.; Ibrah, M.; Sogoba, D.; Dewar, R. L.; Berg, S. C.; Jiang, M. K.; Parta, M.; Washington, J. A.; Polis, M. A.; Lane, H. C.; Tounkara, A.
  3. Aids Research and Human Retroviruses. 2009 25(1): 45-55.
  1. 9.   Divided infraorbital foramen in the lion (Panthera leo): its implications for colonisation history, population bottlenecks, and conservation of the Asian lion (P. l. persica)
  2. Yamaguchi, N.; Kitchener, A. C.; Driscoll, C. A.; Macdonald, D. W.
  3. Contributions to Zoology. 2009 78(2): 77-83.
  1. 10.   Genomic organization, sequence divergence, and recombination of feline immunodeficiency virus from lions in the wild
  2. Pecon-Slattery, J.; McCracken, C. L.; Troyer, J. L.; Vande Woude, S.; Roelke, M.; Sondgeroth, K.; Winterbach, C.; Winterbach, H.; O'Brien, S. J.
  3. Bmc Genomics. 2008 9(66): 1-13.
  1. 11.   Genetics of cattails in radioactively contaminated areas around Chornobyl
  2. Tsyusko, O. V.; Smith, M. H.; Oleksyk, T. K.; Goryanaya, J.; Glenn, T. C.
  3. Molecular Ecology. 2006, Aug; 15(9): 2611-2625.
  1. 12.   HLA class I diversity among rural rainforest inhabitants in Cameroon: identification of A*2612-B*4407 haplotype
  2. Torimiro, J. N.; Carr, J. K.; Wolfe, N. D.; Karacki, P.; Martin, M. P.; Gao, X.; Tamoufe, U.; Thomas, A.; Ngole, E. M.; Birx, D. L.; McCutchan, F. E.; Burke, D. S.; Carrington, M.
  3. Tissue Antigens. 2006, JAN; 67(1): 30-37.
  1. 13.   Seroprevalence and genomic divergence of circulating strains of Feline immunodeficiency virus among Felidae and Hyaenidae species
  2. Troyer, J. L.; Pecon-Slattery, J.; Roelke, M. E.; Johnson, W.; Vande Woude, S.; Vazquez-Salat, N.; Brown, M.; Frank, L.; Woodroffe, R.; Winterbach, C.; Winterbach, H.; Hemson, G.; Bush, M.,; Alexander, K. A.; Revilla, E.; O'Brien, S. J.
  3. Journal of Virology. 2005, JUL; 79(13): 8282-8294.
  1. 14.   Retroviral recombination in vivo: Viral replication patterns and genetic structure of simian immunodeficiency virus (SIV) populations in rhesus macaques after simultaneous or sequential intravaginal inoculation with SIVmac239 Delta vpx/Delta vpr and SIVmac239 Delta nef
  2. Kim, E. Y.; Busch, M.; Abel, K.; Fritts, L.; Bustamante, P.; Stanton, J.; Lu, D.; Wu, S.; Glowczwskie, J.; Rourke, T.; Bogdan, D.; Piatak, M.; Lifson, J. D.; Desrosiers, R. C.; Wolinsky, S.; Miller, C. J.
  3. Journal of Virology. 2005, APR; 79(8): 4886-4895.
  1. 15.   Tuberculosis: from prehistory to Robert Koch, as revealed by ancient DNA
  2. Donoghue, H. D.; Spigelman, M.; Greenblatt, C. L.; Lev-Maor, G.; Bar-Gal, G. K.; Matheson, C.; Vernon, K.; Nerlich, A. G.; Zink, A. R.
  3. Lancet Infectious Diseases. 2004, SEP; 4(9): 584-592.
  1. 16.   Phylogenetic and phylogeographic analysis of Iberian lynx populations
  2. Johnson, W. E.; Godoy, J. A.; Palomares, F.; Delibes, M.; Fernandes, M.; Revilla, E.; O'Brien, S. J.
  3. Journal of Heredity. 2004 95(1): 19-28.
  1. 17.   Phylogeography and subspecies assessment of vicunas in Chile and Bolivia utilizing mtDNA and microsatellite markers: implications for vicuna conservation and management
  2. Sarno, R. J.; Villalba, L.; Bonacic, C.; Gonzalez, B.; Zapata, B.; Mac Donald, D. W.; O'Brien, S. J.; Johnson, W. E.
  3. Conservation Genetics. 2004 5(1): 89-102.
  1. 18.   Patterns of feline immunodeficiency virus multiple infection and genome divergence in a free-ranging population of African lions
  2. Troyer, J. L.; Pecon-Slattery, J.; Roelke, M. E.; Black, L.; Packer, C.; O'Brien, S. J.
  3. Journal of Virology. 2004 78(7): 3777-3791.
  1. 19.   Automated single-strand conformation polymorphism reveals low diversity of a Major Histocompatibility Complex Class II gene in the threatened New Zealand sea lion
  2. Lento, G. M.; Baker, C. S.; David, V.; Yuhki, N.; Gales, N. J.; O'Brien, S. J.
  3. Molecular Ecology Notes. 2003 3(3): 346-349.
  1. 20.   Impact of a population bottleneck on symmetry and genetic diversity in the northern elephant seal
  2. Hoelzel, A. R.; Fleischer, R. C.; Campagna, C.; Le Boeuf, B. J.; Alvord, G.
  3. Journal of Evolutionary Biology. 2002 15(4): 567-575.
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