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  1. 1.   Molecular and genetic characterization of sex-linked orange coat color in the domestic cat
  2. Kaelin, Christopher B; McGowan, Kelly A; Trotman, Joshaya C; Koroma, Donald C; David, Victor A; Menotti-Raymond, Marilyn; Graff, Emily C; Schmidt-Küntzel, Anne; Oancea, Elena; Barsh, Gregory S
  3. Current Biology : CB. 2025, May 12;
  1. 2.   Whole-genome sequencing of 1,083 HPV45 cases and controls identifies genetic variants associated with glandular cervical lesions
  2. Koestler, Aimee J; Nelson, Chase W; Yeager,Stella; Chen, Zigui; Mishra,Sambit; Burdett, Laurie; Dean, Michael; Suh-Burgmann, Elizabeth; Lorey, Thomas; Clifford, Gary M; Wentzensen, Nicolas; Castle, Philip E; Schiffman, Mark; Burk, Robert D; Mirabello, Lisa
  3. International Journal of Cancer. 2025, May 05;
  1. 3.   CR1 variants contribute to FSGS susceptibility across multiple populations
  2. Skitchenko, Rostislav; Modrusan, Zora; Loboda, Alexander; Kopp, Jeffrey B; Winkler,Cheryl; Sergushichev, Alexey; Gupta, Namrata; Stevens, Christine; Daly, Mark J; Shaw, Andrey; Artomov, Mykyta
  3. iScience. 2025, Apr 18; 28(4): 112234.
  1. 4.   Developmental onset of planarian whole-body regeneration depends on axis reset
  2. Booth, Clare L T; Stevens, Brian C; Stubbert, Clover A; Kallgren,Neil; Deihl,Ennis; Davies,Erin
  3. Current Biology : CB. 2025, Apr 11;
  1. 5.   Repression of ZNFX1 by LncRNA ZFAS1 mediates tobacco-induced pulmonary carcinogenesis
  2. Xi, Sichuan; Shan, Jigui; Wu, Xinwei; Wang, Haitao; Zhang, Mary R; Oyetunji, Shakirat; Xu, Hong; Xiao, Zuoxiang; Tolunay, Tuana; Carr, Shamus R; Hoang, Chuong D; Schrump, David S
  3. Cellular & Molecular Biology Letters. 2025, Apr 10; 30(1): 44.
  1. 6.   PRGN-2009 and bintrafusp alfa for patients with advanced or metastatic human papillomavirus-associated cancer
  2. Floudas, Charalampos S; Goswami, Meghali; Donahue, Renee N; Strauss, Julius; Pastor, Danielle M; Redman, Jason M; Brownell, Isaac; Turkbey, Evrim B; Steinberg, Seth M; Cordes, Lisa M; Marté, Jennifer L; Khan, Maheen H; McMahon, Sheri; Lamping, Elizabeth; Manu,Michell; Manukyan,Manuk; Brough, Douglas E; Lankford, Amy; Jochems, Caroline; Schlom, Jeffrey; Gulley, James L
  3. Cancer Immunology, Immunotherapy : CII. 2025, Mar 21; 74(5): 155.
  1. 7.   The human oral microbiome and risk of colorectal cancer within three prospective cohort studies in the United States
  2. Vogtmann, Emily; Yano, Yukiko; Zouiouich, Semi; Hua,Xing; Wan, Yunhu; Purandare, Vaishnavi; Li, Shilan; Dagnall,Casey; Jones, Kristine; Hicks,Belynda; Hutchinson,Amy; Caporaso, J Gregory; Wheeler, William; Huang, Wen-Yi; Freedman, Neal D; Sandler, Dale P; Beane Freeman, Laura E; Liao, Linda M; Gail, Mitchell H; Shi, Jianxin; Abnet, Christian C; Sinha, Rashmi
  3. Cancer. 2025, Mar 15; 131(6): e35802.
  1. 8.   Deletion of a single CTCF motif at the boundary of a chromatin domain with three FGF genes disrupts gene expression and embryonic development
  2. Chakraborty, Shreeta; Wenzlitschke, Nina; Anderson,Matthew; Eraso, Ariel; Baudic, Manon; Thompson, Joyce J; Evans, Alicia A; Shatford-Adams, Lilly M; Chari,Raj; Awasthi,Roackie; Dale, Ryan K; Lewandoski,Mark; Petros, Timothy J; Rocha, Pedro P
  3. Developmental Cell. 2025, Feb 24;
  1. 9.   Identification of molecular determinants of gene-specific bursting patterns by high-throughput imaging screens
  2. Sood, Varun; Holewinski,Ronald; Andresson,Thorkell; Larson, Daniel R; Misteli, Tom
  3. Molecular Cell. 2025, Feb 11;
  1. 10.   Longitudinal single-cell profiles of lung regeneration after viral infection reveal persistent injury-associated cell states
  2. Niethamer, Terren K; Planer, Joseph D; Morley, Michael P; Babu, Apoorva; Zhao, Gan; Basil, Maria C; Cantu, Edward; Frank, David B; Diamond, Joshua M; Nottingham, Ana N; Li, Shanru; Sharma,Arnav; Hallquist, Hannah; Levin, Lillian I; Zhou, Su; Vaughan, Andrew E; Morrisey, Edward E
  3. Cell Stem Cell. 2025, Jan 13;
  1. 11.   The differential interactomes of the KRAS splice variants identify BIRC6 as a ubiquitin ligase for KRAS4A
  2. Kochen Rossi, Juan; Nuevo-Tapioles, Cristina; O'Keefe, Rachel A; Hunkeler, Moritz; Schmoker, Anna M; Fissore-O'Leary, Mercedes; Su, Wenjuan; Ahearn, Ian M; Branco, Cristina; Cheong, Hakyung; Esposito,Dom; Clotea, Ioana; Ueberheide, Beatrix; Fischer, Eric S; Philips, Mark R
  3. Cell Reports. 2024, Dec 19; 44(1): 115087.
  1. 12.   Analysis of the progression of cervical cancer in a low-and-middle-income country: From pre-malignancy to invasive disease
  2. Robinson, Emma; Rodriguez, Isabel; Argueta, Victor; Xie, Yi; Lou, Hong; Milano, Rose; Lee, Hyo Jung; Burdett, Laurie; Mishra,Sambit; Yeager,Meredith; Mirabello, Lisa; Dean, Michael; Orozco, Roberto
  3. Tumour Virus Research. 2024, Dec 11; 200299.
  1. 13.   Aberrant Wnt/ß-catenin signaling in the mesenchymal stem cells of LZTFL1-depleted mice leads to increased adipogenesis, with implications for obesity
  2. Badralmaa,Yunden; Natarajan,Ven
  3. The Journal of Biological Chemistry. 2024, Dec 09; 108057.
  1. 14.   Epigenetic associations with kidney disease in individuals of African ancestry with APOL1 high-risk genotypes and Human Immunodeficiency Virus
  2. Hung, Rachel K Y; Costeira, Ricardo; Chen, Junyu; Schlosser, Pascal; Grundner-Culemann, Franziska; Booth, John W; Sharpe, Claire C; Bramham, Kate; Sun, Yan V; Marconi, Vincent C; Teumer, Alexander; Winkler,Cheryl; Post, Frank A; Bell, Jordana T
  3. Nephrology, Dialysis, Transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association. 2024, Oct 24;
  1. 15.   Human Cripto-1 and Cripto-3 Protein Expression in Normal and Malignant Settings That Conflicts with Established Conventions
  2. Cuttitta,Frank; García-Sanmartín, Josune; Feng,Yang; Sunday, Mary Elizabeth; Kim, Young S; Martínez, Alfredo
  3. Cancers. 2024, Oct 23; 16(21):
  1. 16.   Repeated horizontal acquisition of lagriamide-producing symbionts in Lagriinae beetles
  2. Uppal, Siddharth; Simonson,Sam Waterworth; Nick, Alina; Vogel, Heiko; Flórez, Laura V; Kaltenpoth, Martin; Kwan, Jason C
  3. The ISME Journal. 2024, Oct 23;
  1. 17.   Frameshift mutation spectra overlap between constitutional mismatch repair deficiency tumors and Lynch syndrome tumors
  2. Song,Yurong; Baugher,Ryan; Young,Todd; Somerville,Brandon; Mori,Yuriko; Pinto,Ligia; Nichols, Kim E; Shoemaker, Robert H
  3. The Journal of Clinical Investigation. 2024, Oct 22;
  1. 18.   Multi-objective latent space optimization of generative molecular design models
  2. Abeer, A N M Nafiz; Urban, Nathan M; Weil,Michael; Alexander, Francis J; Yoon, Byung-Jun
  3. Patterns (New York, N.Y.). 2024, Oct 11; 5(10): 101042.
  1. 19.   ERK signaling promotes resistance to TRK kinase inhibition in NTRK fusion-driven glioma mouse models
  2. Schmid, Sebastian; Russell, Zachary R; Shimura Yamashita,Alex; West, Madeline E; Parrish, Abigail G; Walker, Julia; Rudoy, Dmytro; Yan, James Z; Quist, David C; Gessesse, Betemariyam N; Alvinez, Neriah; Hill, Kimberly D; Anderson,Larry; Cimino, Patrick J; Kumasaka, Debra K; Parchment,Ralph; Holland, Eric C; Szulzewsky, Frank
  3. Cell Reports. 2024, Oct 03; 43(10): 114829.
  1. 20.   A novel pathogenic germline chromosome 3 inversion in von Hippel-Lindau disease
  2. Vocke, Cathy D; Ricketts, Christopher J; Pack, Svetlana; Raffeld, Mark; Hewitt, Stephen; Lebensohn, Alexandra P; O'Brien, Lidenys; Gautam, Rabindra; Reynolds, Krista; Schmidt,Laura; Choo, Kristin; Kenigsberg, Alex; Gurram, Sandeep; Chew, Emily Y; Nilubol, Naris; Chittaboina, Prashant; Merino, Maria J; Ball, Mark W; Linehan, W Marston
  3. Journal of Medical Genetics. 2024, Sep 24;
  1. 21.   Dietary therapy of murine primary biliary cholangitis induces hepatocellular steatosis: A cautionary tale
  2. Zhang, Weici; Al Tekreeti, Taha; Leung, Patrick S C; Tsuneyama, Koichi; Dhillon, Harleen; Rojas, Manuel; Heuer, Luke S; Ridgway, William M; Ansari, Aftab A; Young,Howard; Mackay, Charles R; Gershwin, M Eric
  3. Liver International : official journal of the International Association for the Study of the Liver. 2024, Aug 05;
  1. 22.   Multi-generational benefits of genetic rescue
  2. Onorato, Dave P; Cunningham, Mark W; Lotz, Mark; Criffield, Marc; Shindle, David; Johnson, Annette; Clemons, Bambi C F; Shea, Colin P; Roelke-Parker,Melody; Johnson, Warren E; McClintock, Brett T; Pilgrim, Kristine L; Schwartz, Michael K; Oli, Madan K
  3. Scientific reports. 2024, Jul 30; 14(1): 17519.
  1. 23.   Evaluation of somatic copy number variation detection by NGS technologies and bioinformatics tools on a hyper-diploid cancer genome
  2. Masood, Daniall; Ren, Luyao; Nguyen, Cu; Brundu, Francesco G; Zheng, Lily; Zhao,Yongmei; Jaeger, Erich; Li, Yong; Cha, Seong Won; Halpern, Aaron; Truong, Sean; Virata, Michael; Yan, Chunhua; Chen, Qingrong; Pang, Andy; Alberto, Reyes; Xiao, Chunlin; Yang, Zhaowei; Chen, Wanqiu; Wang, Charles; Cross, Frank; Catreux, Severine; Shi, Leming; Beaver, Julia A; Xiao, Wenming; Meerzaman, Daoud M
  3. Genome Biology. 2024, Jun 20; 25(1): 163.
  1. 24.   Stability and gene strand bias of lambda prophages and chromosome organization in Escherichia coli
  2. Li, Xintian; Gallardo, Oscar; August, Elias; Dassa, Bareket; Court,Don; Stavans, Joel; Arbel-Goren, Rinat
  3. mBio. 2024, Jun 18; e0207823.
  1. 25.   Microenvironment shapes small-cell lung cancer neuroendocrine states and presents therapeutic opportunities
  2. Desai, Parth; Takahashi, Nobuyuki; Kumar, Rajesh; Nichols, Samantha; Malin, Justin; Hunt, Allison; Schultz, Christopher; Cao, Yingying; Tillo, Desiree; Nousome, Darryl; Chauhan, Lakshya; Sciuto, Linda; Jordan, Kimberly; Rajapakse, Vinodh; Tandon, Mayank; Lissa, Delphine; Zhang, Yang; Kumar, Suresh; Pongor, Lorinc; Singh, Abhay; Schroder, Brett; Sharma, Ajit Kumar; Chang, Tiangen; Vilimas, Rasa; Pinkiert, Danielle; Graham, Chante; Butcher,Donna; Warner,Andrew; Sebastian, Robin; Mahon, Mimi; Baker, Karen; Cheng, Jennifer; Berger, Ann; Lake, Ross; Abel, Melissa; Krishnamurthy, Manan; Chrisafis, George; Fitzgerald, Peter; Nirula, Micheal; Goyal, Shubhank; Atkinson, Devon; Bateman, Nicholas W; Abulez, Tamara; Nair, Govind; Apolo, Andrea; Guha, Udayan; Karim,Baktiar; El Meskini,Rajaa; Ohler,Zoe; Jolly, Mohit Kumar; Schaffer, Alejandro; Ruppin, Eytan; Kleiner, David; Miettinen, Markku; Brown, G Tom; Hewitt, Stephen; Conrads, Thomas; Thomas, Anish
  3. Cell Reports. Medicine. 2024, Jun 18; 5(6): 101610.
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