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  1. 1.   Transcriptionally-active "defective" HIV-1 proviruses and their association with immunological non-response to antiretroviral therapy
  2. Scrimieri, Francesca; Bastian, Estella; Smith, Mindy; Rehm, Catherine A; Morse, Caryn; Kuruppu, Janaki; McLaughlin, Mary; Chang,Weizhong; Sereti, Irini; Kovacs, Joseph A; Lane, H Clifford; Imamichi, Hiromi
  3. The Journal of Infectious Diseases. 2024, Jan 16;
  1. 2.   Immune correlates of HIV-1 reservoir cell decline in early-treated infants
  2. Hartana, Ciputra Adijaya; Garcia-Broncano, Pilar; Rassadkina, Yelizaveta; Lian, Xiaodong; Jiang, Chenyang; Einkauf, Kevin B; Maswabi, Kenneth; Ajibola, Gbolahan; Moyo, Sikhulile; Mohammed, Terence; Maphorisa, Comfort; Makhema, Joseph; Yuki,Yuko; Martin,Pat; Bennett, Kara; Jean-Philippe, Patrick; Viard,Mathias; Hughes, Michael D; Powis, Kathleen M; Carrington,Mary; Lockman, Shahin; Gao, Ce; Yu, Xu G; Kuritzkes, Daniel R; Shapiro, Roger; Lichterfeld, Mathias
  3. Cell Reports. 2022, Jul 19; 40(3): 111126.
  1. 3.   Structural and biochemical characterization of the inhibitor complexes of xenotropic murine leukemia virus-related virus protease
  2. Li, M.; Gustchina, A.; Matuz, K.; Tozser, J.; Namwong, S.; Goldfarb, N. E.; Dunn, B. M.; Wlodawer, A.
  3. Febs Journal. 2011, Nov; 278(22): 4413-4424.
  1. 4.   Crystal structures of the free and inhibited forms of plasmepsin I (PMI) from Plasmodium falciparum
  2. Bhaumik, P.; Horimoto, Y.; Xiao, H. G.; Miura, T.; Hidaka, K.; Kiso, Y.; Wlodawer, A.; Yada, R. Y.; Gustchina, A.
  3. Journal of Structural Biology. 2011, Jul; 175(1): 73-84.
  1. 5.   Foamy Retrovirus Integrase Contains a Pol Dimerization Domain Required for Protease Activation
  2. Lee, E. G.; Roy, J.; Jackson, D.; Clark, P.; Boyer, P. L.; Hughes, S. H.; Linial, M. L.
  3. Journal of Virology. 2011, Feb; 85(4): 1655-1661.
  1. 6.   Crystal structure of XMRV protease differs from the structures of other retropepsins
  2. Li, M.; DiMaio, F.; Zhou, D. W.; Gustchina, A.; Lubkowski, J.; Dauter, Z.; Baker, D.; Wlodawer, A.
  3. Nature Structural & Molecular Biology. 2011, Feb; 18(2): 227-229.
  1. 7.   Crystal Structures of Inhibitor Complexes of Human T-Cell Leukemia Virus (HTLV-1) Protease
  2. Satoh, T.; Li, M.; Nguyen, J. T.; Kiso, Y.; Gustchina, A.; Wlodawer, A.
  3. Journal of Molecular Biology. 2010, Aug; 401(4): 626-641.
  1. 8.   The Early Years of Retroviral Protease Crystal Structures
  2. Miller, M.
  3. Biopolymers. 2010 94(4): 521-529.
  1. 9.   Structural characterization of B and non-B subtypes of HIV-protease: Insights into the natural susceptibility to drug resistance development
  2. Sanches, M.; Krauchenco, S.; Martins, N. H.; Gustchina, A.; Wlodawer, A.; Polikarpov, I.
  3. Journal of Molecular Biology. 2007, Jun; 369(4): 1029-1040.
  1. 10.   Residue centrality, functionally important residues, and active site shape: Analysis of enzyme and non-enzyme families
  2. del Sol, A.; Fujihashi, H.; Amoros, D.; Nussinov, R.
  3. Protein Science. 2006, Sep; 15(9): 2120-2128.
  1. 11.   Chemical compound navigator: A web-based chem-BLAST, chemical taxonomy-based search engine for browsing compounds
  2. Prasanna, M. D.; Vondrasek, J.; Wlodawer, A.; Rodriguez, H.; Bhat, T. N.
  3. Proteins-Structure Function and Bioinformatics. 2006, Jun; 63(4): 907-917.
  1. 12.   Molecular replacement with pseudosymmetry and model dissimilarity: a case study
  2. Jaskolski, M.; Li, M.; Laco, G.; Gustchina, A.; Wlodawer, A.
  3. Acta Crystallographica Section D-Biological Crystallography. 2006, FEB; 62(Part 2): 208-215.
  1. 13.   Residues crucial for maintaining short paths in network communication mediate signaling in proteins
  2. del Sol, A.; Fujihashi, H.; Amoros, D.; Nussinov, R.
  3. Molecular Systems Biology. 2006
  1. 14.   Crystal structure of human T cell leukemia virus protease, a novel target for anticancer drug design
  2. Li, M.; Laco, G. S.; Jaskolski, M.; Rozycki, J.; Alexandratos, J.; Wlodawer, A.; Gustchina, A.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2005, Dec; 102(51): 18332-18337.
  1. 15.   Partner molecules of accessory protein Vpr of the human immunodeficiency virus type 1
  2. Kino, T.; Pavlakis, G. N.
  3. DNA and Cell Biology. 2004 23(4): 193-205.
  1. 16.   In vitro processing of HIV-1 nucleocapsid protein by the viral proteinase: Effects of amino acid substitutions at the scissile bond in the proximal zinc finger sequence
  2. Tozser, J.; Shulenin, S.; Louis, J. M.; Copeland, T. D.; Oroszlan, S.
  3. Biochemistry. 2004 43(14): 4304-4312.
  1. 17.   Kinetics of the dimerization of retroviral proteases: The "fireman's grip" and dimerization
  2. Ingr, M.; Uhlikova, T.; Strisovsky, K.; Majerova, E.; Konvalinka, J.
  3. Protein Science. 2003 12(10): 2173-2182.
  1. 18.   Human immunodeficiency virus type 1 capsid protein is a substrate of the retroviral proteinase while integrase is resistant toward proteolysis
  2. Tozser, J.; Shulenin, S.; Kadas, J.; Boross, M.; Bagossi, M.; Copeland, T. D.; Nair, B. C.; Sarngadharan, M. G.; Oroszlan, S.
  3. Virology. 2003 310(1): 16-23.
  1. 19.   Effect of sequence polymorphism and drug resistance on two HIV- 1 Gag processing sites
  2. Feher, A.; Weber, I. T.; Bagossi, P.; Boross, P.; Mahalingam, B.; Louis, J. M.; Copeland, T. D.; Torshin, I. Y.; Harrison, R. W.; Tozser, J.
  3. European Journal of Biochemistry. 2002 269(16): 4114-4120.
  1. 20.   Molecular motions and conformational changes of HPPK
  2. Keskin, O.; Ji, X.; Blaszcyk, J.; Covell, D. G.
  3. Proteins-Structure Function and Genetics. 2002 49(2): 191-205.
  1. 21.   HIVdb: A database of the structures of human immunodeficiency virus protease
  2. Vondrasek, J.; Wlodawer, A.
  3. Proteins-Structure Function and Genetics. 2002 49(4): 429-431.
  1. 22.   A potent human immunodeficiency virus type 1 protease inhibitor, UIC-94003 (TMC-126), and selection of a novel (A28S) mutation in the protease active site
  2. Yoshimura, K.; Kato, R.; Kavlick, M. F.; Nguyen, A.; Maroun, V.; Maeda, K.; Hussain, K. A.; Ghosh, A. K.; Gulnik, S. V.; Erickson, J. W.; Mitsuya, H.
  3. Journal of Virology. 2002 76(3): 1349-1358.
  1. 23.   Point mutations and sequence variability in proteins. Redistributions of preexisting populations
  2. Sinha, N.; Nussinov, R.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2001 98(6): 3139-3144.
  1. 24.   Building blocks, hinge-bending motions and protein topology
  2. Sinha, N.; Tsai, C. J.; Nussinov, R.
  3. Journal of Biomolecular Structure & Dynamics. 2001 19(3): 369-380.
  1. 25.   Comparison of the substrate specificity of the human T-cell leukemia virus and human immunodeficiency virus proteinases
  2. Tozser, J.; Zahuczky, G.; Bagossi, P.; Louis, J. M.; Copeland, T. D.; Oroszlan, S.; Harrison, R. W.; Weber, I. T.
  3. European Journal of Biochemistry. 2000 267(20): 6287-6295.
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