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  1. 1.   TRAIL induces cytokine production via the NFkB2 pathway promoting neutrophil chemotaxis and neutrophil-mediated immune-suppression in triple negative breast cancer cells
  2. Kundu, Manjari; Greer, Yoshimi E; Lobanov, Alexei; Ridnour, Lisa; Donahue, Renee N; Ng, Yeap; Ratnayake, Shashi; White, Karley; Voeller, Donna; Weltz, Sarah; Chen, Qingrong; Lockett,Stephen; Cam, Maggie; Meerzaman, Daoud; Wink, David A; Weigert, Roberto; Lipkowitz, Stanley
  3. Cancer Letters. 2025, Jun 28; 620: 217692.
  1. 2.   Molecular and genetic characterization of sex-linked orange coat color in the domestic cat
  2. Kaelin, Christopher B; McGowan, Kelly A; Trotman, Joshaya C; Koroma, Donald C; David, Victor A; Menotti-Raymond, Marilyn; Graff, Emily C; Schmidt-Küntzel, Anne; Oancea, Elena; Barsh, Gregory S
  3. Current Biology : CB. 2025, May 12;
  1. 3.   Machine learning-augmented molecular dynamics simulations (MD) reveal insights into the disconnect between affinity and activation of ZTP riboswitch ligands
  2. Fullenkamp, Christopher; Mehdi, Shams; Jones, Christopher; Tenney, Logan; Pichling, Patricio; Prestwood, Peri R; Ferré-D'Amaré, Adrian R; Tiwary, Pratyush; Schneekloth,John
  3. Angewandte Chemie (International ed. in English). 2025, May 01; e202505971.
  1. 4.   Repression of ZNFX1 by LncRNA ZFAS1 mediates tobacco-induced pulmonary carcinogenesis
  2. Xi, Sichuan; Shan, Jigui; Wu, Xinwei; Wang, Haitao; Zhang, Mary R; Oyetunji, Shakirat; Xu, Hong; Xiao, Zuoxiang; Tolunay, Tuana; Carr, Shamus R; Hoang, Chuong D; Schrump, David S
  3. Cellular & Molecular Biology Letters. 2025, Apr 10; 30(1): 44.
  1. 5.   Duplicate entries in the Protein Data Bank: how to detect and handle them
  2. Wlodawer,Alexander; Dauter, Zbigniew; Rubach, Pawel; Minor, Wladek; Jaskolski, Mariusz; Jiang, Ziqiu; Jeffcott, William; Anosova, Olga; Kurlin, Vitaliy
  3. Acta Crystallographica. Section D, Structural Biology. 2025, Apr 01;
  1. 6.   Distinct allosteric networks in CDK4 and CDK6 in the cell cycle and in drug resistance
  2. Zhang,Wengang; Bradburn, Devin; Heidebrink, Gretchen; Liu, Yonglan; Jang,Hyunbum; Nussinov,Ruth; Kõivomägi, Mardo
  3. Journal of Molecular Biology. 2025, Mar 31; 169121.
  1. 7.   Neolignan and 3-Benzylchroman Derivatives From Celastrus orbiculatus Thunb
  2. Hua, Silu; Liu, Ping; Miao, Li; Zhang, Likui; Wang, Haibo; Liu, Yanqing; Wang,Dongdong; Jiang, Wei
  3. Chemistry & Biodiversity. 2025, Mar 18; e202500273.
  1. 8.   Inhibition of Ribosome Biogenesis in vivo Causes p53-Dependent Death and p53-Independent Dysfunction
  2. Cho, Charles J; Nguyen, Thanh; Rougeau, Amala K; Huang, Yang-Zhe; To, Sarah; Lin, Xiaobo; Thalalla Gamage,Supuni; Meier,Jordan; Mills, Jason C
  3. Cellular and Molecular Gastroenterology and Hepatology. 2025, Mar 11; 101496.
  1. 9.   A robust fluorogenic substrate for chikungunya virus protease (nsP2) activity
  2. Makhaik, Sparsh; Rut, Wioletta; Choudhary, Shruti; Upadhyay, Tulsi; Hao, Chenzhou; Westberg, Michael; Bobst, Cedric; Yoo,Euna; Fejzo, Jasna; Lin, Michael Z; Bogyo, Matthew; Thompson, Paul; Drag, Marcin; Hardy, Jeanne A
  3. Protein Science : a publication of the Protein Society. 2025, Mar; 34(3): e70069.
  1. 10.   ShiftScan: A tool for rapid analysis of high-throughput differential scanning fluorimetry data and compound prioritization
  2. Waterworth, Samantha C; Shenoy, Shilpa R; Sharma, Nirmala D; Wolcott,Chris; Donohue,Duncan; O'Keefe,Barry; Beutler,John
  3. Protein Science : a publication of the Protein Society. 2025, Mar; 34(3): e70055.
  1. 11.   Deletion of a single CTCF motif at the boundary of a chromatin domain with three FGF genes disrupts gene expression and embryonic development
  2. Chakraborty, Shreeta; Wenzlitschke, Nina; Anderson,Matthew; Eraso, Ariel; Baudic, Manon; Thompson, Joyce J; Evans, Alicia A; Shatford-Adams, Lilly M; Chari,Raj; Awasthi,Roackie; Dale, Ryan K; Lewandoski,Mark; Petros, Timothy J; Rocha, Pedro P
  3. Developmental Cell. 2025, Feb 24;
  1. 12.   Identification of molecular determinants of gene-specific bursting patterns by high-throughput imaging screens
  2. Sood, Varun; Holewinski,Ronald; Andresson,Thorkell; Larson, Daniel R; Misteli, Tom
  3. Molecular Cell. 2025, Feb 11;
  1. 13.   Aberrant Wnt/ß-catenin signaling in the mesenchymal stem cells of LZTFL1-depleted mice leads to increased adipogenesis, with implications for obesity
  2. Badralmaa,Yunden; Natarajan,Ven
  3. The Journal of Biological Chemistry. 2024, Dec 09; 108057.
  1. 14.   Modulating the immunodominance hierarchy of immunoglobulin germline-encoded structural motifs targeting the influenza hemagglutinin stem
  2. Ataca, Sila; Sangesland, Maya; de Paiva Fróes Rocha, Rebeca; Torrents de la Peña, Alba; Ronsard, Larance; Boyoglu-Barnum, Seyhan; Gillespie, Rebecca A; Tsybovsky,Yaroslav; Stephens,Tyler; Moin, Syed M; Lederhofer, Julia; Creanga, Adrian; Andrews, Sarah F; Barnes, Ralston M; Rohrer, Daniel; Lonberg, Nils; Graham, Barney S; Ward, Andrew B; Lingwood, Daniel; Kanekiyo, Masaru
  3. Cell Reports. 2024, Nov 22; 43(12): 114990.
  1. 15.   Structure-based design of glycoprotein subunit vaccines for mumps
  2. Loomis, Rebecca J; Lai, Yen-Ting; Sowers, Sun B; Fisher, Brian; Derrien-Colemyn, Alexandrine; Ambrozak, David R; Tsybovsky,Yaroslav; Crooke, Stephen N; Latner, Donald R; Kong, Wing-Pui; Ruckwardt, Tracy J; Plotkin, Stanley A; Kwong, Peter D; Mascola, John R; Graham, Barney S; Hickman, Carole J; Stewart-Jones, Guillaume B E
  3. Proceedings of the National Academy of Sciences of the United States of America. 2024, Nov 19; 121(47): e2404053121.
  1. 16.   Analytical measuring interval, linearity, and precision of serology assays for detection of SARS-CoV-2 antibodies according to CLSI guidelines
  2. Haynesworth,Katrina; Kemp,Troy; Loftus,Sarah; Metz,Jordan; Castro, Nicholas C; Bullock, Jimmie; Fetterer, David; Pinto,Ligia
  3. mSphere. 2024, Oct 31; e0039324.
  1. 17.   The structure of the IL-11 signalling complex provides insight into receptor variants associated with craniosynostosis
  2. Sentosa, Darlene D; Metcalfe,Riley; Sims, Natalie A; Putoczki, Tracy L; Griffin, Michael D W
  3. The FEBS Journal. 2024, Oct 27;
  1. 18.   Epigenetic associations with kidney disease in individuals of African ancestry with APOL1 high-risk genotypes and Human Immunodeficiency Virus
  2. Hung, Rachel K Y; Costeira, Ricardo; Chen, Junyu; Schlosser, Pascal; Grundner-Culemann, Franziska; Booth, John W; Sharpe, Claire C; Bramham, Kate; Sun, Yan V; Marconi, Vincent C; Teumer, Alexander; Winkler,Cheryl; Post, Frank A; Bell, Jordana T
  3. Nephrology, Dialysis, Transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association. 2024, Oct 24;
  1. 19.   Human Cripto-1 and Cripto-3 Protein Expression in Normal and Malignant Settings That Conflicts with Established Conventions
  2. Cuttitta,Frank; García-Sanmartín, Josune; Feng,Yang; Sunday, Mary Elizabeth; Kim, Young S; Martínez, Alfredo
  3. Cancers. 2024, Oct 23; 16(21):
  1. 20.   Multi-objective latent space optimization of generative molecular design models
  2. Abeer, A N M Nafiz; Urban, Nathan M; Weil,Michael; Alexander, Francis J; Yoon, Byung-Jun
  3. Patterns (New York, N.Y.). 2024, Oct 11; 5(10): 101042.
  1. 21.   Self-extinguishing relay waves enable homeostatic control of human neutrophil swarming
  2. Strickland, Evelyn; Pan, Deng; Godfrey, Christian; Kim, Julia S; Hopke, Alex; Ji, Wencheng; Degrange,Maureen; Villavicencio, Bryant; Mansour, Michael K; Zerbe, Christa S; Irimia, Daniel; Amir, Ariel; Weiner, Orion D
  3. Developmental Cell. 2024, Oct 7; 59(19): 2659-2671.
  1. 22.   Kinetic Studies on the Interaction of HIV-1 Gag Protein with the HIV-1 RNA Packaging Signal
  2. Rink,Connie; Kroupa, Tomas; Rein,Alan; Datta,Siddhartha
  3. Viruses. 2024, Sep 25; 16(10): 1517.
  1. 23.   Structure elucidation, absolute configuration, and biological evaluation of cyclic peroxides from the sponge Plakinastrella sp
  2. Kumar,Rohitesh; Akee,Rhone; Martinez Fructuoso,Lucero; Fernandes Freire,Vitor; Thornburg,Chris; Evans,Jason; Peyser,Brian; Ensel,Susan; O'Keefe,Barry; Grkovic,Tanja
  3. Bioorganic & Medicinal Chemistry Letters. 2024, Sep 14; 113: 129963.
  1. 24.   A patient-derived cell model for malignant transformation in IDH-mutant glioma
  2. Kim, Olga; Sergi, Zach; Yu, Guangyang; Yamamoto, Kazutoshi; Quezado, Martha; Abdullaev, Zied; Crooks, Danel R; Kishimoto, Shun; Li, Qi; Lu, Peng; Blackman, Burchelle; Andresson,Thorkell; Wu,Xiaolin; Tran,Bao; Wei, Jun S; Zhang, Wei; Zhang, Meili; Song, Hua; Khan, Javed; Krishna, Murali C; Brender, Jeffrey R; Wu, Jing
  3. Acta Neuropathologica Communications. 2024, Sep 10; 12(1): 148.
  1. 25.   Novel Arf1 Inhibitors Drive Cancer Stem Cell Aging and Potentiate Anti-Tumor Immunity
  2. Wang, Yuetong; Li, Qiaoming; Ding, Yahui; Luo, Chenfei; Yang, Jun; Wang, Na; Jiang, Ning; Yao, Tiange; Wang, Guohao; Shi, Guoming; Hou, Steven X
  3. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). 2024, Sep 03; e2404442.
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