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  1. 1.   Distinct allosteric networks in CDK4 and CDK6 in the cell cycle and in drug resistance
  2. Zhang,Wengang; Bradburn, Devin; Heidebrink, Gretchen; Liu, Yonglan; Jang,Hyunbum; Nussinov,Ruth; Kõivomägi, Mardo
  3. Journal of Molecular Biology. 2025, Mar 31; 169121.
  1. 2.   Discovery of potent and selective PROTACs for the protein kinase LZK for the treatment of head and neck cancer
  2. Katerji,Meghri; Bergman, Knickole L; Lindberg, Eric; Rubin,Maxine; Funk, Amy L; Woodroofe, Carolyn C; Nyswaner, Katherine; Karpinska, Kamila; Serwa, Remigiusz; Marusiak, Anna; Swenson, Rolf E; Brognard,John
  3. The Journal of Biological Chemistry. 2025, Mar 27; 108452.
  1. 3.   Biochemical and biophysical characterization of inositol-tetrakisphosphate 1-kinase inhibitors
  2. Ng,Martin; Wang, Huanchen; Zhang, Haibo; Prucker, Isabel; Perera, Lalith; Goncharova,Katya; Wamiru,Antony; Jessen, Henning J; Stanley, Robin E; Shears, Stephen B; Luo, Ji; O'Keefe,Barry; Wilson,Brice
  3. The Journal of Biological Chemistry. 2025, Feb 06; 108274.
  1. 4.   Purification and characterization of full-length monomeric TEC family kinase, ITK
  2. Rathnayake, Udumbara M; Wada, Junya; Wall, Vanessa E; Jones,Jane; Jenkins, Lisa M; Andreotti, Amy H; Samelson, Lawrence E
  3. Protein Expression and Purification. 2025, Jan 31; 229: 106682.
  1. 5.   Metabolic dependency mapping identifies Peroxiredoxin 1 as a driver of resistance to ATM inhibition
  2. Li, Haojian; Furusawa, Takashi; Cavero, Renzo; Xiao, Yunjie; Chari,Raj; Wu,Xiaolin; Sun, David; Hartmann, Oliver; Dhall, Anjali; Holewinski,Ronald; Andresson,Thorkell; Karim,Baktiar; Villamor-Payà, Marina; Gallardo, Devorah; Day, Chi-Ping; Pal, Lipika R; Nair, Nishanth Ulhas; Ruppin, Eytan; Aladjem, Mirit I; Pommier, Yves; Diefenbacher, Markus E; Lim, Jung Mi; Levine, Rodney L; Stracker, Travis H; Weyemi, Urbain
  3. Redox Biology. 2025, Jan 19; 80: 103503.
  1. 6.   Fine-tuning probes for fluorescence polarization binding assays of bivalent ligands against polo-like kinase 1 using full-length protein
  2. Tsuji, Kohei; Tamamura, Hirokazu; Burke,Terrence
  3. Bioorganic & Medicinal Chemistry . 2024, Dec 28; 119: 118055.
  1. 7.   Two hearts beat as one: the debate over RAS dimers continues
  2. Stephen,Andy
  3. Trends in Biochemical Sciences. 2024, Nov; 49(11): 933-935.
  1. 8.   Phosphorylation of P-stalk proteins defines the ribosomal state for interaction with auxiliary protein factors
  2. Filipek, Kamil; Blanchet, Sandra; Molestak, Eliza; Zaciura, Monika; Wu,Colin; Horbowicz-Drozdzal, Patrycja; Grela, Przemyslaw; Zalewski, Mateusz; Kmiecik, Sebastian; González-Ibarra, Alan; Krokowski, Dawid; Latoch, Przemyslaw; Starosta, Agata L; Molon, Mateusz; Shao, Yutian; Borkiewicz, Lidia; Michalec-Wawiórka, Barbara; Wawiórka, Leszek; Kubinski, Konrad; Socala, Katarzyna; Wlaz, Piotr; Cunningham, Kyle W; Green, Rachel; Rodnina, Marina V; Tchórzewski, Marek
  3. EMBO Reports. 2024, Oct 28;
  1. 9.   PKR activation-induced mitochondrial dysfunction in HIV-transgenic mice with nephropathy
  2. Yoshida, Teruhiko; Latt, Khun Zaw; Rosenberg, Avi Z; Santo, Briana A; Myakala, Komuraiah; Ishimoto,Yu; Zhao, Yongmei; Shrivastav, Shashi; Jones, Bryce A; Yang, Xiaoping; Wang, Xiaoxin X; Tutino, Vincent M; Sarder, Pinaki; Levi, Moshe; Okamoto, Koji; Winkler, Cheryl A; Kopp, Jeffrey B
  3. eLife. 2024, Aug 29; 12
  1. 10.   Improved Production of Class I Phosphatidylinositol 4,5-bisphosphate 3-kinase
  2. Messing,Simon; Widmeyer, Stephanie R T; Denson,John-Paul; Mehalko,Jennifer; Wall,Vanessa; Drew,Matt; Snead,Kelly; Hong,Min; Grose,Carissa; Esposito,Dom; Gillette,Bill
  3. Protein Expression and Purification. 2024, Aug 20; 106582.
  1. 11.   The SRC family kinase inhibitor NXP900 demonstrates potent anti-tumor activity in squamous cell carcinomas
  2. Dash,Sweta; Hanson, Sabrina; King, Ben; Nyswaner, Katherine; Foss, Kelcie; Tesi,Noelle; Harvey, Mungo J B; Navarro-Marchal, Saúl A; Woods, Allison; Poradosu, Enrique; Unciti-Broceta, Asier; Carragher, Neil O; Brognard,John
  3. The Journal of Biological Chemistry. 2024, Jul 30; 107615.
  1. 12.   Regulation of RAF family kinases: new insights from recent structural and biochemical studies
  2. Spencer-Smith, Russell; Morrison,Deborah
  3. Biochemical Society Transactions. 2024, June 26; 52(3): 1061-1069.
  1. 13.   The Janus kinase 1 is critical for pancreatic cancer initiation and progression
  2. Shrestha, Hridaya; Rädler, Patrick D; Dennaoui, Rayane; Wicker, Madison N; Rajbhandari, Nirakar; Sun, Yunguang; Peck, Amy R; Vistisen, Kerry; Triplett, Aleata A; Beydoun, Rafic; Sterneck,Esta; Saur, Dieter; Rui, Hallgeir; Wagner, Kay-Uwe
  3. Cell Reports. 2024, May 10; 43(5): 114202.
  1. 14.   Slower CDK4 and faster CDK2 activation in the cell cycle
  2. Zhang,Wengang; Liu,Yonglan; Jang,Hyunbum; Nussinov,Ruth
  3. Structure (London, England : 1993). 2024, Apr 23;
  1. 15.   Abrogation of the G2/M checkpoint as a chemo sensitization approach for alkylating agents
  2. Lang, Fengchao; Cornwell, James A; Kaur, Karambir; Elmogazy, Omar; Zhang, Wei; Zhang, Meili; Song, Hua; Sun,David; Wu,Xiaolin; Aladjem, Mirit I; Aregger,Michael; Cappell, Steven D; Yang, Chunzhang
  3. Neuro-Oncology. 2023, Dec 22;
  1. 16.   PIM1 targeted degradation prevents the emergence of chemoresistance in prostate cancer
  2. Torres-Ayuso, Pedro; Katerji,Meghri; Mehlich, Dawid; Lookingbill, Sophia A; Sabbasani, Venkata R; Liou, Hope; Casillas, Andrea L; Chauhan, Shailender S; Serwa, Remigiusz; Rubin,Maxine; Marusiak, Anna A; Swenson, Rolf E; Warfel, Noel A; Brognard,John
  3. Cell Chemical Biology. 2023, Nov 16;
  1. 17.   Specific inhibition of an anticancer target, polo-like kinase 1, by allosterically dismantling its mechanism of substrate recognition
  2. Park, Jung-Eun; Kirsch, Klara; Lee, Hobin; Oliva, Paola; Ahn, Jong Il; Ravishankar, Harsha; Zeng, Yan; Fox,Stephen; Kirby, Samuel A; Badhwar, Pooja; Andresson,Thorkell; Jacobson, Kenneth A; Lee, Kyung S
  3. Proceedings of the National Academy of Sciences of the United States of America. 2023, Aug 29; 120(35): e2305037120.
  1. 18.   Structure of Helicobacter pylori dihydroneopterin aldolase suggests a fragment-based strategy for isozyme-specific inhibitor design
  2. Shaw,Gary; Fan,Lixin; Cherry,Scott; Shi,Genbin; Tropea, Joseph E; Ji,Xinhua
  3. Current Research in Structural Biology. 2023, Jan 30; 5: 100095.
  1. 19.   RASopathy mutations provide functional insight into the BRAF cysteine-rich domain and reveal the importance of autoinhibition in BRAF regulation
  2. Smith,Russell; Terrell,Elizabeth; Insinna, Christine; Agamasu, Constance; Wagner, Morgan E; Ritt,Daniel; Stauffer,Jimmy; Stephen,Andy; Morrison,Deborah
  3. Molecular Cell. 2022, Nov 17; 82(22): 4262-4276.
  1. 20.   Treatment with a JAK1/2 inhibitor ameliorates murine autoimmune cholangitis induced by IFN overexpression
  2. Shao, Tihong; Leung, Patrick S C; Zhang, Weici; Tsuneyama, Koichi; Ridgway, William M; Young,Howard; Shuai, Zongwen; Ansari, Aftab A; Gershwin, M Eric
  3. Cellular & Molecular Immunology. 2022, Aug 30;
  1. 21.   ARAF protein kinase activates RAS by antagonizing its binding to RASGAP NF1
  2. Su, Wenjing; Mukherjee, Radha; Yaeger, Rona; Son, Jieun; Xu, Jianing; Na, Na; Merna Timaul, Neilawattie; Hechtman, Jaclyn; Paroder, Viktoriya; Lin, Mika; Mattar, Marissa; Qiu, Juan; Chang, Qing; Zhao, Huiyong; Zhang, Jonathan; Little, Megan; Adachi, Yuta; Han, Sae-Won; Taylor, Barry S; Ebi, Hiromichi; Abdel-Wahab, Omar; de Stanchina, Elisa; Rudin, Charles M; Jänne, Pasi A; McCormick, Frank; Yao, Zhan; Rosen, Neal
  3. Molecular Cell. 2022, May 14;
  1. 22.   ERK phosphorylation is dependent on cell adhesion in a subset of pediatric sarcoma cell lines
  2. Yoon, Hye-Young; Maron, Ben Y; Girald-Berlingeri, Sofia; Gasilina, Anjelika; Gollin, Josephine C; Jian, Xiaoying; Akpan, Itoro; Yohe,Marielle; Randazzo, Paul A; Chen, Pei-Wen
  3. Biochimica et Biophysica Acta. Molecular Cell Research. 2022, Apr 03; 1869(8):
  1. 23.   Regulation of GTPase function by autophosphorylation
  2. Johnson, Christian W; Seo, Hyuk-Soo; Terrell,Elizabeth; Yang, Moon-Hee; KleinJan, Fenneke; Gebregiworgis, Teklab; Gasmi-Seabrook, Genevieve M C; Geffken, Ezekiel A; Lakhani, Jimit; Song, Kijun; Bashyal, Puspalata; Popow, Olesja; Paulo, Joao A; Liu, Andrea; Mattos, Carla; Marshall, Christopher B; Ikura, Mitsuhiko; Morrison, Deborah K; Dhe-Paganon, Sirano; Haigis, Kevin M
  3. Molecular Cell. 2022, Feb 18; 82(5): 950-968.e14.
  1. 24.   Allosteric regulation of autoinhibition and activation of c-Abl
  2. Liu,Yonglan; Zhang,Mingzhen; Tsai,Chung-Jung; Jang,Hyunbum; Nussinov,Ruth
  3. Computational and Structural Biotechnology Journal. 2022 20: 4257-4270.
  1. 25.   The mechanism of Raf activation through dimerization
  2. Zhang,Mingzhen; Maloney,Ryan; Jang,Hyunbum; Nussinov,Ruth
  3. Chemical Science. 2021, Dec 08; 12(47): 15609-15619.
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