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  1. 1.   The GTEx Consortium atlas of genetic regulatory effects across human tissues
  2. Aguet, Francois; Barbeira, Alvaro N.; Bonazzola, Rodrigo; Brown, Andrew; Castel, Stephane E.; Jo, Brian; Kasela, Silva; Kim-Hellmuth, Sarah; Liang, Yanyu; Parsana, Princy; Flynn, Elise; Fresard, Laure; Gamazon, Eric R.; Hamel, Andrew R.; He, Yuan; Hormozdiari, Farhad; Mohammadi, Pejman; Munoz-Aguirre, Manuel; Ardlie, Kristin G.; Battle, Alexis; Bonazzola, Rodrigo; Brown, Christopher D.; Cox, Nancy; Dermitzakis, Emmanouil T.; Engelhardt, Barbara E.; Garrido-Martin, Diego; Gay, Nicole R.; Getz, Gad; Guigo, Roderic; Hamel, Andrew R.; Handsaker, Robert E.; He, Yuan; Hoffman, Paul J.; Hormozdiari, Farhad; Im, Hae Kyung; Jo, Brian; Kasela, Silva; Kashin, Seva; Kim-Hellmuth, Sarah; Kwong, Alan; Lappalainen, Tuuli; Li, Xiao; Liang, Yanyu; MacArthur, Daniel G.; Mohammadi, Pejman; Montgomery, Stephen B.; Munoz-Aguirre, Manuel; Rouhana, John M.; Hormozdiari, Farhad; Im, Hae Kyung; Kim-Hellmuth, Sarah; Ardlie, Kristin G.; Getz, Gad; Guigo, Roderic; Im, Hae Kyung; Lappalainen, Tuuli; Montgomery, Stephen B.; Im, Hae Kyung; Lappalainen, Tuuli; Lappalainen, Tuuli; Anand, Shankara; Gabriel, Stacey; Getz, Gad; Graubert, Aaron; Hadley, Kane; Handsaker, Robert E.; Huang, Katherine H.; Kashin, Seva; Li, Xiao; MacArthur, Daniel G.; Meier, Samuel R.; Nedzel, Jared L.; Balliu, Brunilda; Conrad, Don; Cotter, Daniel J.; Das, Sayantan; de Goede, Olivia M.; Eskin, Eleazar; Eulalio, Tiffany Y.; Ferraro, Nicole M.; Garrido-Martin, Diego; Gay, Nicole R.; Getz, Gad; Graubert, Aaron; Guigo, Roderic; Hadley, Kane; Hamel, Andrew R.; Handsaker, Robert E.; He, Yuan; Hoffman, Paul J.; Hormozdiari, Farhad; Hou, Lei; Huang, Katherine H.; Im, Hae Kyung; Jo, Brian; Kasela, Silva; Kashin, Seva; Kellis, Manolis; Kim-Hellmuth, Sarah; Kwong, Alan; Lappalainen, Tuuli; Li, Xiao; Li, Xin; Liang, Yanyu; MacArthur, Daniel G.; Mangul, Serghei; Meier, Samuel R.; Mohammadi, Pejman; Montgomery, Stephen B.; Munoz-Aguirre, Manuel; Nachun, Daniel C.; Nedzel, Jared L.; Nguyen, Duyen Y.; Nobel, Andrew B.; Park, YoSon; Reverter, Ferran; Sabatti, Chiara; Saha, Ashis; Segre, Ayellet; Stephens, Matthew; Strober, Benjamin J.; Teran, Nicole A.; Todres, Ellen; Vinuela, Ana; Wang, Gao; Wen, Xiaoquan; Wright, Fred; Wucher, Valentin; Zou, Yuxin; Ferreira, Pedro G.; Li, Gen; Mele, Marta; Yeger-Lotem, Esti; Barcus, Mary E.; Bradbury, Debra; Krubit,Tanya; McLean,Jeff; Qi,Liqun; Robinson, Karna; Roche,Nancy; Smith, Anna M.; Tabor,David; Undale, Anita; Bridge, Jason; Brigham, Lori E.; Foster, Barbara A.; Gillard, Bryan M.; Hasz, Richard; Hunter, Marcus; Johns, Christopher; Johnson, Mark; Karasik, Ellen; Kopen, Gene; Leinweber, William F.; McDonald, Alisa; Moser, Michael T.; Myer, Kevin; Ramsey, Kimberley D.; Roe, Brian; Shad, Saboor; Thomas, Jeffrey A.; Walters, Gary; Washington, Michael; Wheeler, Joseph; Jewell, Scott D.; Rohrer, Daniel C.; Valley, Dana R.; Davis, David A.; Mash, Deborah C.; Branton, Philip A.; Sobin, Leslie; Barker, Laura K.; Gardiner, Heather M.; Mosavel, Maghboeba; Siminoff, Laura A.; Flicek, Paul; Haeussler, Maximilian; Juettemann, Thomas; Kent, W. James; Lee, Christopher M.; Powell, Conner C.; Rosenbloom, Kate R.; Ruffier, Magali; Sheppard, Dan; Taylor, Kieron; Trevanion, Stephen J.; Zerbino, Daniel R.; Abell, Nathan S.; Akey, Joshua; Chen, Lin; Demanelis, Kathryn; Doherty, Jennifer A.; Feinberg, Andrew P.; Hansen, Kasper D.; Hickey, Peter F.; Hou, Lei; Jasmine, Farzana; Jiang, Lihua; Kaul, Rajinder; Kellis, Manolis; Kibriya, Muhammad G.; Li, Jin Billy; Li, Qin; Lin, Shin; Linder, Sandra E.; Montgomery, Stephen B.; Oliva, Meritxell; Park, Yongjin; Pierce, Brandon L.; Rizzardi, Lindsay F.; Skol, Andrew D.; Smith, Kevin S.; Snyder, Michael; Stamatoyannopoulos, John; Tang, Hua; Wang, Meng; Carithers, Latarsha J.; Guan, Ping; Koester, Susan E.; Little, A. Roger; Moore, Helen M.; Nierras, Concepcion R.; Rao, Abhi K.; Vaught, Jimmie B.; Volpi, Simona
  3. SCIENCE. 2020, SEP 11; 369(6509): 1318-+.
  1. 2.   The MHC in the era of next-generation sequencing: Implications for bridging structure with function
  2. Petersdorf, Effie W.; Ohuigin,Colm
  3. HUMAN IMMUNOLOGY. 2019, Jan; 80(1): 67-78.
  1. 3.   Fine mapping of a region of chromosome 11q13 reveals multiple independent loci associated with risk of prostate cancer
  2. Chung, C. C.; Ciampa, J.; Yeager, M.; Jacobs, K. B.; Berndt, S. I.; Hayes, R. B.; Gonzalez-Bosquet, J.; Kraft, P.; Wacholder, S.; Orr, N.; Yu, K.; Hutchinson, A.; Boland, J.; Chen, Q.; Feigelson, H. S.; Thun, M. J.; Diver, W. R.; Albanes, D.; Virtamo, J.; Weinstein, S.; Schumacher, F. R.; Cancel-Tassin, G.; Cussenot, O.; Valeri, A.; Andriole, G. L.; Crawford, E. D.; Haiman, C. A.; Henderson, B. E.; Kolonel, L.; Le Marchand, L.; Siddiq, A.; Riboli, E.; Key, T. J.; Kaaks, R.; Isaacs, W. B.; Isaacs, S. D.; Gronberg, H.; Wiklund, F.; Xu, J. F.; Vatten, L. J.; Hveem, K.; Njolstad, I.; Gerhard, D. S.; Tucker, M.; Hoover, R. N.; Fraumeni, J. F.; Hunter, D. J.; Thomas, G.; Chatterjee, N.; Chanock, S. J.
  3. Human Molecular Genetics. 2011, Jul; 20(14): 2869-2878.
  1. 4.   Accounting for multiple comparisons in a genome-wide association study (GWAS)
  2. Johnson, R. C.; Nelson, G. W.; Troyer, J. L.; Lautenberger, J. A.; Kessing, B. D.; Winkler, C. A.; O'Brien, S. J.
  3. Bmc Genomics. 2010, Dec; 11: 6.
  1. 5.   Admixture Mapping Comes of Age
  2. Winkler, C. A.; Nelson, G. W.; Smith, M. W.
  3. Annual review of genomics and human genetics. 2010, Sep 22; 11: 65-89.
  1. 6.   Worldwide Distribution of the MYH9 Kidney Disease Susceptibility Alleles and Haplotypes: Evidence of Historical Selection in Africa
  2. Oleksyk, T. K.; Nelson, G. W.; An, P.; Kopp, J. B.; Winkler, C. A.
  3. Plos One. 2010, Jul; 5(7): 12.
  1. 7.   Diversity in the Glucose Transporter-4 Gene (SLC2A4) in Humans Reflects the Action of Natural Selection along the Old-World Primates Evolution
  2. Tarazona-Santos, E.; Fabbri, C.; Yeager, M.; Magalhaes, W. C.; Burdett, L.; Crenshaw, A.; Pettener, D.; Chanock, S. J.
  3. Plos One. 2010, Mar; 5(3): 10.
  1. 8.   Genetics of Focal Segmental Glomerulosclerosis and Human Immunodeficiency Virus-Associated Collapsing Glomerulopathy: The Role of MYH9 Genetic Variation
  2. Winkler, C. A.; Nelson, G.; Oleksyk, T. K.; Nava, M. B.; Kopp, J. B.
  3. Seminars in Nephrology. 2010, Mar; 30(2): 111-125.
  1. 9.   MYH9 is associated with nondiabetic end-stage renal disease in African Americans
  2. Kao, W.; Klag, M. J.; Meoni, L. A.; Reich, D.; Berthier-Schaad, Y.; Li, M.; Coresh, J.; Patterson, N.; Tandon, A.; Powe, N. R.; Fink, N. E.; Sadler, J. H.; Weir, M. R.; Abboud, H. E.; Adler, S. G.; Divers, J.; Iyengar, S. K.; Freedman, B. I.; Kimmel, P. L.; Knowler, W. C.; Kohn, O. F.; Kramp, K.; Leehey, D. J.; Nicholas, S. B.; Pahl, M. V.; Schelling, J. R.; Sedor, J. R.; Thornley-Brown, D.; Winkler, C. A.; Smith, M. W.; Parekh, R. S.; Family Investigation of Nephropathy and Diabetes Research Group
  3. Nature Genetics. 2008 40(10): 1185-1192.
  1. 10.   KIR haplotypes defined by segregation analysis in 59 Centre d'Etude Polymorphisme Humain (CEPH) families
  2. Martin, M. P.; Single, R. M.; Wilson, M. J.; Trowsdale, J.; Carrington, M.
  3. Immunogenetics. 2008 60(12): 767-774.
  1. 11.   A genomewide admixture map for Latino populations
  2. Price, A. L.; Patterson, N.; Yu, F.; Cox, D. R.; Waliszewska, A.; McDonald, G. J.; Tandon, A.; Schirmer, C.; Neubauer, J.; Bedoya, G.; Duque, C.; Villegas, A.; Bortolini, M. C.; Salzano, F. M.; Gallo, C.; Mazzotti, G.; Tello-Ruiz, M.; Riba, L.; Aguilar-Salinas, C. A.; Canizales-Quinteros, S.; Menjivar, M.; Klitz, W.; Henderson, B.; Haiman, C. A.; Winkler, C.; Tusie-Luna, T.; Ruiz-Linares, A.; Reich, D.
  3. American Journal of Human Genetics. 2007, Jun; 80(6): 1024-1036.
  1. 12.   ISHAPE: new rapid and accurate software for haplotyping
  2. Delaneau, O.; Coulonges, C.; Boelle, P. Y.; Nelson, G.; Spadoni, J. L.; Zagury, J. F.
  3. Bmc Bioinformatics. 2007, Jun; 8
  1. 13.   Elevated male European and female African contributions to the genomes of African American individuals
  2. Lind, J. M.; Hutcheson-Dilks, H. B.; Williams, S. M.; Moore, J. H.; Essex, M.; Ruiz-Pesini, E.; Wallace, D. C.; Tishkoff, S. A.; O'Brien, S. J.; Smith, M. W.
  3. Human Genetics. 2007, Jan; 120(5): 713-722.
  1. 14.   Diversity of MICA and linkage disequilibrium with HLA-B in two North American populations
  2. Gao, X. J.; Single, R. M.; Karacki, P.; Marti, D.; O'Brien, S. J.; Carrington, M.
  3. Human Immunology. 2006, MAR; 67(3, Special Issue): 152-158.
  1. 15.   Searching for signals of evolutionary selection in 168 genes related to immune function
  2. Walsh, E. C.; Sabeti, P.; Hutcheson, H. B.; Fry, B.; Schaffner, S. F.; de Bakker, P. I. W.; Varilly, P.; Palma, A. A.; Roy, J.; Cooper, R.; Winkler, C.; Zeng, Y.; de The, G.; Lander, E. S.; O'Brien, S.; Altshuler, D.
  3. Human Genetics. 2006, Mar; 119(1-2): 92-102.
  1. 16.   SNP500Cancer: a public resource for sequence validation, assay development, and frequency analysis for genetic variation in candidate genes
  2. Packer, B. R.; Yeager, M.; Burdett, L.; Welch, R.; Beerman, M.; Qi, L. Q.; Sicotte, H.; Staats, B.; Acharya, M.; Crenshaw, A.; Eckert, A.; Puri, V.; Gerhard, D. S.; Chanock, S. J.
  3. Nucleic Acids Research. 2006, Jan; 34: D617-D621.
  1. 17.   Variation of the killer cell immunoglobulin-like receptors and HLA-C genes in nasopharyngeal carcinoma
  2. Kovacic, M. B.; Martin, M.; Gao, X. J.; Fuksenko, T.; Chen, C. J.; Cheng, Y. J.; Chen, J. Y.; Apple, R.; Hildesheim, A.; Carrington, M.
  3. Cancer Epidemiology Biomarkers & Prevention. 2005, NOV; 14(11, Part 1): 2673-2677.
  1. 18.   The case for selection at CCR5-Delta 32
  2. Sabeti, P. C.; Walsh, E.; Schaffner, S. F.; Varilly, P.; Fry, B.; Hutcheson, H. B.; Cullen, M.; Mikkelsen, T. S.; Roy, J.; Patterson, N.; Cooper, R.; Reich, D.; Altshuler, D.; O'Brien, S.; Lander, E. S.
  3. Plos Biology. 2005, NOV; 3(11): 1963-1969.
  1. 19.   Genetic variation, nucleotide diversity, and linkage disequilibrium in seven telomere stability genes suggest that these genes may be under constraint
  2. Savage, S. A.; Stewart, B. J.; Eckert, A.; Kiley, M.; Liao, J. S.; Chanock, S. J.
  3. Human Mutation. 2005, OCT; 26(4): 343-350.
  1. 20.   Variants in the Wilms' tumor gene are associated with focal segmental glomerulosclerosis in the African American population
  2. Orloff, M. S.; Iyengar, S. K.; Winkler, C. A.; Goddard, K. A. B.; Dart, R. A.; Ahuja, T. S.; Mokrzycki, M.; Briggs, W. A.; Korbet, S. M.; Kimmel, P. L.; Simon, E. E.; Trachtman, H.; Vlahov, D.; Michel, D. M.; Berns, J. S.; Smith, M. C.; Schelling, J. R.; Sedor, J. R.; Kopp, J. B.
  3. Physiological Genomics. 2005, APR 14; 21(2): 212-221.
  1. 21.   The linkage disequilibrium maps of three human chromosomes across four populations reflect their demographic history and a common underlying recombination pattern
  2. De La Vega, F. M.; Isaac, H.; Collins, A.; Scafe, C. R.; Halldorsson, B. V.; Su, X. P.; Lippert, R. A.; Wang, Y.; Laig-Webster, M.; Koehler, R. T.; Ziegle, J. S.; Wogan, L. T.; Stevens, J. F.; Leinen, K. M.; Olson, S. J.; Guegler, K. J.; You, X. Q.; Xu, L. H.; Hemken, H. G.; Kalush, F.; Itakura, M.; Zheng, Y.; de The, G.; O'Brien, S. J.; Clark, A. G.; Istrail, S.; Hunkapiller, M. W.; Spier, E. G.; Gilbert, D. A.
  3. Genome Research. 2005, APR; 15(4): 454-462.
  1. 22.   Polymorphisms in multidrug resistance 1 (MDR1) gene are associated with refractory Crohn disease and ulcerative colitis
  2. Potocnik, U.; Ferkolj, I.; Glavac, D.; Dean, M.
  3. Genes and Immunity. 2004, NOV; 5(7): 530-539.
  1. 23.   Lack of associations between HLA class II alleles and resistance to HIV-1 infection among white, non-hispanic homosexual men
  2. Liu, C. L.; Carrington, M.; Kaslow, R. A.; Gao, X. J.; Rinaldo, C. R.; Jacobson, L. P.; Margolick, J. B.; Phair, J.; Obrien, S. J.; Detels, R.
  3. Jaids-Journal of Acquired Immune Deficiency Syndromes. 2004, OCT 1; 37(2): 1313-1317.
  1. 24.   Comparison of the genomic structure and variation in the two human sodium-dependent vitamin C transporters, SLC23A1 and SLC23A2
  2. Eck, P.; Erichsen, H. C.; Taylor, J. G.; Yeager, M.; Hughes, A. L.; Levine, M.; Chanock, S. J.
  3. Human Genetics. 2004, SEP; 115(4): 285-294.
  1. 25.   Methods for high-density admixture mapping of disease genes
  2. Patterson, N.; Hattangadi, N.; Lane, B.; Lohmueller, K. E.; Hafler, D. A.; Oksenberg, J. R.; Hauser, S. L.; Smith, M. W.; O'Brien, S. J.; Altshuler, D.; Daly, M. J.; Reich, D.
  3. American Journal of Human Genetics. 2004 74(5): 979-1000.
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