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  1. 1.   MoCoLo: a testing framework for motif co-localization
  2. Xu, Qi; Del Mundo, Imee M A; Zewail-Foote, Maha; Luke,Brian; Vasquez, Karen M; Kowalski, Jeanne
  3. Briefings in Bioinformatics. 2024, Jan 22; 25(2):
  1. 2.   Longitudinal in vivo imaging of acute neuropathology in a monkey model of Ebola virus infection
  2. Schreiber-Stainthorp, William; Solomon,Jeffrey; Lee, Ji Hyun; Castro, Marcelo; Shah, Swati; Martinez-Orengo, Neysha; Reeder, Rebecca; Maric, Dragan; Gross, Robin; Qin, Jing; Hagen, Katie R.; Johnson, Reed F.; Hammoud, Dima A.
  3. Nature communications. 2021, May 17; 12(1):
  1. 3.   Modulation of MHC-E transport by viral decoy ligands is required for RhCMV/SIV vaccine efficacy
  2. Verweij, Marieke C.; Hansen, Scott G.; Iyer, Ravi; John, Nessy; Malouli, Daniel; Morrow, David; Scholz, Isabel; Womack, Jennie; Abdulhaqq, Shaheed; Gilbride, Roxanne M.; Hughes, Colette M.; Ventura, Abigail B.; Ford, Julia C.; Selseth, Andrea N.; Oswald,Kelli; Shoemaker,Rebecca; Berkemeier,Brian; Bosche,Bj; Hull,Mike; Shao, Jason; Sacha, Jonah B.; Axthelm, Michael K.; Edlefsen, Paul T.; Lifson,Jeffrey; Picker, Louis J.; Frueh, Klaus
  3. Science. 2021, Apr 30; 372(6451):
  1. 4.   Structural analyses of the PKA RII beta holoenzyme containing the oncogenic DnaJB1-PKAc fusion protein reveal protomer asymmetry and fusion-induced allosteric perturbations in fibrolamellar hepatocellular carcinoma
  2. Lu, Tsan-Wen; Aoto, Phillip C.; Weng, Jui-Hung; Nielsen, Cole; Cash, Jennifer N.; Hall, James; Zhang,Ping; Simon, Sanford M.; Cianfrocco, Michael A.; Taylor, Susan S.
  3. PLOS BIOLOGY. 2020, Dec; 18(12):
  1. 5.   Collective cancer cell invasion requires RNA accumulation at the invasive front
  2. Chrisafis, George; Wang, Tianhong; Moissoglu, Konstadinos; Gasparski, Alexander N.; Ng, Yeap; Weigert, Roberto; Lockett,Stephen; Mili, Stavroula
  3. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2020, NOV 3; 117(44): 27423-27434.
  1. 6.   Filoviruses infect rhesus macaque synoviocytes in vivo and primary human synoviocytes in vitro
  2. Cooper, Timothy K; Logue, James; Liu, David X; Perry, Donna L; Hart, Randy J; Hischak, Amanda M W; Bernbaum, John G; Gerhardt, Dawn M; Rojas, Oscar; Bohannon, J Kyle; Hagen, Katie R; Johnson, Reed F; Crozier,Ian; Jahrling, Peter B; Hensley, Lisa E; Bennett, Richard S
  3. The American journal of pathology. 2020, SEP; 190(9): 1867-1880.
  1. 7.   PIP2 Influences the Conformational Dynamics of Membrane-Bound KRAS4b
  2. McLean, Mark A.; Stephen,Andy; Sligar, Stephen G.
  3. BIOCHEMISTRY. 2019, Aug 20; 58: 3537-3545.
  1. 8.   The cell polarity protein Scrib functions as a tumor suppressor in liver cancer
  2. Kapil, Shweta; Sharma, Bal Krishan; Patil, Mallikarjun; Elattar, Sawsan; Yuan, Jinling; Hou, Steven; Kolhe, Ravindra; Satyanarayana, Ande
  3. Oncotarget. 2017, Apr 18; 8(16): 26515-26531.
  1. 9.   A novel role of the organizer gene Goosecoid as an inhibitor of Wnt/PCP-mediated convergent extension in Xenopus and mouse
  2. Ulmer, Baerbel; Tingler, Melanie; Kurz, Sabrina; Maerker, Markus; Andre, Philipp; Moench, Dina; Campione, Marina; Deissler, Kirsten; Lewandoski, Mark; Thumberger, Thomas; Schweickert, Axel; Fainsod, Abraham; Steinbeisser, Herbert; Blum, Martin
  3. SCIENTIFIC REPORTS. 2017, 2017-02-21; 7
  1. 10.   Multiparametric 3T Prostate Magnetic Resonance Imaging to Detect Cancer: Histopathological Correlation Using Prostatectomy Specimens Processed in Customized Magnetic Resonance Imaging Based Molds
  2. Turkbey, B.; Mani, H.; Shah, V.; Rastinehad, A. R.; Bernardo, M.; Pohida, T.; Pang, Y. X.; Daar, D.; Benjamin, C.; McKinney, Y. L.; Trivedi, H.; Chua, C.; Bratslavsky, G.; Shih, J. H.; Linehan, W. M.; Merino, M. J.; Choyke, P. L.; Pinto, P. A.
  3. Journal of Urology. 2011, Nov; 186(5): 1818-1824.
  1. 11.   14-3-3 Proteins: Diverse functions in cell proliferation and cancer progression
  2. Freeman, A. K.; Morrison, D. K.
  3. Seminars in Cell & Developmental Biology. 2011, Sep; 22(7): 681-687.
  1. 12.   Serendipitous alkylation of a Plk1 ligand uncovers a new binding channel
  2. Liu, F.; Park, J. E.; Qian, W. J.; Lim, D.; Graber, M.; Berg, T.; Yaffe, M. B.; Lee, K. S.; Burke, T. R.
  3. Nature Chemical Biology. 2011, Sep; 7(9): 595-601.
  1. 13.   TNF optimally activatives regulatory T cells by inducing TNF receptor superfamily members TNFR2, 4-1BB and OX40
  2. Hamano, R.; Huang, J. Q.; Yoshimura, T.; Oppenheim, J. J.; Chen, X.
  3. European Journal of Immunology. 2011, Jul; 41(7): 2010-2020.
  1. 14.   Identification of a putative Crimean-Congo hemorrhagic fever virus entry factor
  2. Xiao, X. D.; Feng, Y.; Zhu, Z. Y.; Dimitrov, D. S.
  3. Biochemical and Biophysical Research Communications. 2011, Jul; 411(2): 253-258.
  1. 15.   Wnt4 induces nephronic tubules in metanephric mesenchyme by a non-canonical mechanism
  2. Tanigawa, S.; Wang, H. G.; Yang, Y. L.; Sharma, N.; Tarasova, N.; Ajima, R.; Yamaguchi, T. P.; Rodriguez, L. G.; Perantoni, A. O.
  3. Developmental Biology. 2011, Apr; 352(1): 58-69.
  1. 16.   Premature death and neurologic abnormalities in transgenic mice expressing a mutant huntingtin exon-2 fragment
  2. Tebbenkamp, A. T. N.; Swing, D.; Tessarollo, L.; Borchelt, D. R.
  3. Human Molecular Genetics. 2011, Apr; 20(8): 1633-1642.
  1. 17.   Dopaminergic Neuronal Loss, Reduced Neurite Complexity and Autophagic Abnormalities in Transgenic Mice Expressing G2019S Mutant LRRK2
  2. Ramonet, D.; Daher, J. P. L.; Lin, B. M.; Stafa, K.; Kim, J.; Banerjee, R.; Westerlund, M.; Pletnikova, O.; Glauser, L.; Yang, L. C.; Liu, Y.; Swing, D. A.; Beal, M. F.; Troncoso, J. C.; McCaffery, J. M.; Jenkins, N. A.; Copeland, N. G.; Galter, D.; Thomas, B.; Lee, M. K.; Dawson, T. M.; Dawson, V. L.; Moore, D. J.
  3. Plos One. 2011, Apr; 6(4):
  1. 18.   Cumulative mechanisms of lymphoid tissue fibrosis and T cell depletion in HIV-1 and SIV infections
  2. Zeng, M.; Smith, A. J.; Wietgrefe, S. W.; Southern, P. J.; Schacker, T. W.; Reilly, C. S.; Estes, J. D.; Burton, G. F.; Silvestri, G.; Lifson, J. D.; Carlis, J. V.; Haase, A. T.
  3. Journal of Clinical Investigation. 2011, Mar; 121(3): 998-1008.
  1. 19.   Is Apparent Diffusion Coefficient Associated with Clinical Risk Scores for Prostate Cancers that Are Visible on 3-T MR Images ?
  2. Turkbey, B.; Shah, V. P.; Pang, Y. X.; Bernardo, M.; Xu, S.; Kruecker, J.; Locklin, J.; Baccala, A. A.; Rastinehad, A. R.; Merino, M. J.; Shih, J. H.; Wood, B. J.; Pinto, P. A.; Choyke, P. L.
  3. Radiology. 2011, Feb; 258(2): 488-495.
  1. 20.   Light-sensitive lipid-based nanoparticles for drug delivery: design principles and future considerations for biological applications
  2. Yavlovich, A.; Smith, B.; Gupta, K.; Blumenthal, R.; Puri, A.
  3. Molecular Membrane Biology. 2010, Oct; 27(7): 364-381.
  1. 21.   Targeting botulinum neurotoxin persistence by the ubiquitin-proteasome system
  2. Tsai, Y. C.; Maditz, R.; Kuo, C. L.; Fishman, P. S.; Shoemaker, C. B.; Oyler, G. A.; Weissman, A. M.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2010, Sep; 107(38): 16554-16559.
  1. 22.   The arylstibonic acid compound NSC13746 disrupts B-ZIP binding to DNA in living cells
  2. Heyerdahl, S. L.; Rozenberg, J.; Jamtgaard, L.; Rishi, V.; Varticovski, L.; Akah, K.; Scudiero, D.; Shoemaker, R. H.; Karpova, T. S.; Day, R. N.; McNally, J. G.; Vinson, C.
  3. European Journal of Cell Biology. 2010, Jul; 89(7): 564-573.
  1. 23.   Probing Binding Modes of Small Molecule Inhibitors to the Polo-Box Domain of Human Polo-like Kinase 1
  2. Liao, C. Z.; Park, J. E.; Bang, J. K.; Nicklaus, M. C.; Lee, K. S.
  3. Acs Medicinal Chemistry Letters. 2010, Jun; 1(3): 110-114.
  1. 24.   Polo-box domain: a versatile mediator of polo-like kinase function
  2. Park, J. E.; Soung, N. K.; Johmura, Y.; Kang, Y. H.; Liao, C.; Lee, K. H.; Park, C. H.; Nicklaus, M. C.; Lee, K. S.
  3. Cellular and Molecular Life Sciences. 2010, Jun; 67(12): 1957-1970.
  1. 25.   Schizosaccharomyces pombe Dss1p Is a DNA Damage Checkpoint Protein That Recruits Rad24p, Cdc25p, and Rae1p to DNA Double-strand Breaks
  2. Selvanathan, S. P.; Thakurta, A. G.; Dhakshnamoorthy, J.; Zhou, M.; Veenstra, T. D.; Dhar, R.
  3. Journal of Biological Chemistry. 2010, May; 285(19): 14122-14133.
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