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  1. 1.   Computationally Optimized SARS-CoV-2 MHC Class I and II Vaccine Formulations Predicted to Target Human Haplotype Distributions
  2. Liu, Ge; Carter, Brandon; Bricken, Trenton; Jain, Siddhartha; Viard,Mathias; Carrington,Mary; Gifford, David K
  3. Cell systems. 2020, AUG 26; 11(2): 131-144.e6.
  1. 2.   Distinct genetic architectures and environmental factors associate with host response to the gamma 2-herpesvirus infections
  2. Sallah, Neneh; Miley, Wendell; Labo, Nazzarena; Carstensen, Tommy; Fatumo, Segun; Gurdasani, Deepti; Pollard, Martin O; Dilthey, Alexander T; Mentzer, Alexander J; Marshall, Vickie; Cornejo Castro, Elena M; Pomilla, Cristina; Young, Elizabeth H; Asiki, Gershim; Hibberd, Martin L; Sandhu, Manjinder; Kellam, Paul; Newton, Robert; Whitby, Denise; Barroso, Inês
  3. Nature communications. 2020, Jul 31; 11(1): 3849.
  1. 3.   HLA heterozygote advantage against HIV-1 is driven by quantitative and qualitative differences in HLA allele-specific peptide presentation
  2. Arora, Jatin; Pierini, Federica; McLaren, Paul J; Carrington,Mary; Fellay, Jacques; Lenz, Tobias L
  3. Molecular biology and evolution. 2020, MAR; 37(3): 639-650.
  1. 4.   Diversity and Complexity of the Large Surface Protein Family in the Compacted Genomes of Multiple Pneumocystis Species
  2. Ma, Liang; Chen, Zehua; Huang,Dawei; Cissé, Ousmane H; Rothenburger, Jamie L; Latinne, Alice; Bishop, Lisa; Blair, Robert; Brenchley, Jason M; Chabé, Magali; Deng, Xilong; Hirsch, Vanessa; Keesler, Rebekah; Kutty, Geetha; Liu, Yueqin; Margolis, Daniel; Morand, Serge; Pahar, Bapi; Peng, Li; Van Rompay, Koen K A; Song, Xiaohong; Song, Jun; Sukura, Antti; Thapar, Sabrina; Wang, Honghui; Weissenbacher-Lang, Christiane; Xu, Jie; Lee, Chao-Hung; Jardine, Claire; Lempicki, Richard A; Cushion, Melanie T; Cuomo, Christina A; Kovacs, Joseph A
  3. mBio. 2020, Mar-Apr; 11(2):
  1. 5.   Identification of trophoblast-specific elements in the HLA-C core promoter
  2. Johnson, Jenna K; Wright, Paul; Li, Hongchuan; Anderson, Steve
  3. HLA. 2018, Oct 01; 92(5): 288-297.
  1. 6.   Ultrasensitive single-genome sequencing: accurate, targeted, next generation sequencing of HIV-1 RNA.
  2. Boltz, Valerie; Rausch, Jason; Shao, Wei; Hattori, Takaaki; Luke, Brian; Maldarelli, Frank; Mellors, John W; Kearney, Mary F; Coffin, John
  3. Retrovirology. 2016, Dec 20; 13(1): 87.
  1. 7.   Quantification of irinotecan, SN38, and SN38G in human and porcine plasma by ultra high-performance liquid chromatography-tandem mass spectrometry and its application to hepatic chemoembolization
  2. Chen, X. H.; Peer, C. J.; Alfaro, R.; Tian, T.; Spencer, S. D.; Figg, W. D.
  3. Journal of Pharmaceutical and Biomedical Analysis. 2012, Mar; 62: 140-148.
  1. 8.   Vaccine Protection against Simian Immunodeficiency Virus in Monkeys Using Recombinant Gamma-2 Herpesvirus
  2. Bilello, J. P.; Manrique, J. M.; Shin, Y. C.; Lauer, W.; Li, W. J.; Lifson, J. D.; Mansfield, K. G.; Johnson, R. P.; Desrosiers, R. C.
  3. Journal of Virology. 2011, Dec; 85(23): 12708-12720.
  1. 9.   Characterization and polymorphic analysis of 4.5 kb genomic full-length HLA-C in the Chinese Han population
  2. Xu, Y.; Deng, Z.; O'HUigin, C.; Wang, D.; Gao, S.; Zeng, J.; Yang, B.; Jin, S.; Zou, H.
  3. Tissue Antigens. 2011, Aug; 78(2): 102-114.
  1. 10.   Mechanisms of Allergen-Antibody Interaction of Cockroach Allergen Bla g 2 with Monoclonal Antibodies That Inhibit IgE Antibody Binding
  2. Glesner, J.; Wunschmann, S.; Li, M.; Gustchina, A.; Wlodawer, A.; Himly, M.; Chapman, M. D.; Pomes, A.
  3. Plos One. 2011, Jul; 6(7): 11.
  1. 11.   Spectrum of MHC Class II Variability in Darwin's Finches and Their Close Relatives
  2. Sato, A.; Tichy, H.; Grant, P. R.; Grant, B. R.; Sato, T.; O'HUigin, C.
  3. Molecular Biology and Evolution. 2011, Jun; 28(6): 1943-1956.
  1. 12.   Antiviral activity of alpha-helical stapled peptides designed from the HIV-1 capsid dimerization domain
  2. Zhang, H. T.; Curreli, F.; Zhang, X. H.; Bhattacharya, S.; Waheed, A. A.; Cooper, A.; Cowburn, D.; Freed, E. O.; Debnath, A. K.
  3. Retrovirology. 2011, May; 8: 18.
  1. 13.   Evolution of ABC transporters by gene duplication and their role in human disease
  2. Moitra, K.; Dean, M.
  3. Biological Chemistry. 2011, Jan; 392(1-2): 29-37.
  1. 14.   Next-generation sequencing for HLA typing of class I loci
  2. Erlich, R. L.; Jia, X. M.; Anderson, S.; Banks, E.; Gao, X. J.; Carrington, M.; Gupta, N.; DePristo, M. A.; Henn, M. R.; Lennon, N. J.; de Bakker, P. I. W.
  3. Bmc Genomics. 2011, Jan; 12: 13.
  1. 15.   Characterization of the Meiosis-Specific Recombinase Dmc1 of Pneumocystis
  2. Kutty, G.; Achaz, G.; Maldarelli, F.; Varma, A.; Shroff, R.; Becker, S.; Fantoni, G.; Kovacs, J. A.
  3. Journal of Infectious Diseases. 2010, Dec; 202(12): 1920-1929.
  1. 16.   Proteomic Analysis of Nuclei Isolated from Cancer Cell Lines Treated with Indenoisoquinoline NSC 724998, a Novel Topoisomerase I Inhibitor
  2. Han, B. N.; Stockwin, L. H.; Hancock, C.; Yu, S. X.; Hollingshead, M. G.; Newton, D. L.
  3. Journal of Proteome Research. 2010, Aug 6; 9(8): 4016-4027.
  1. 17.   Effects of thymic selection of the T-cell repertoire on HLA class I-associated control of HIV infection
  2. Kosmrlj, A.; Read, E. L.; Qi, Y.; Allen, T. M.; Altfeld, M.; Deeks, S. G.; Pereyra, F.; Carrington, M.; Walker, B. D.; Chakraborty, A. K.
  3. Nature. 2010, May; 465(7296): 350-U107.
  1. 18.   The macrophage in HIV-1 infection: From activation to deactivation?
  2. Herbein, G.; Varin, A.
  3. Retrovirology. 2010, Apr; 7: 15.
  1. 19.   MHC Heterozygote Advantage in Simian Immunodeficiency Virus-Infected Mauritian Cynomolgus Macaques
  2. O'Connor, S. L.; Lhost, J. J.; Becker, E. A.; Detmer, A. M.; Johnson, R. C.; MacNair, C. E.; Wiseman, R. W.; Karl, J. A.; Greene, J. M.; Burwitz, B. J.; Bimber, B. N.; Lank, S. M.; Tuscher, J. J.; Mee, E. T.; Rose, N. J.; Desrosiers, R. C.; Hughes, A. L.; Friedrich, T. C.; Carrington, M.; O'Connor, D. H.
  3. Science Translational Medicine. 2010, Mar; 2(22): 9.
  1. 20.   In situ detection of Gag-specific CD8(+) cells in the GI tract of SIV infected Rhesus macaques
  2. Tjernlund, A.; Zhu, J.; Laing, K.; Diem, K.; McDonald, D.; Vazquez, J.; Cao, J. H.; Ohlen, C.; McElrath, M. J.; Picker, L. J.; Corey, L.
  3. Retrovirology. 2010, Feb; 7: 14.
  1. 21.   Processing and presentation of antigens derived from intracellular protozoan parasites
  2. Goldszmid, R. S.; Sher, A.
  3. Current Opinion in Immunology. 2010, Feb; 22(1): 118-123.
  1. 22.   Inhibitory TCR Coreceptor PD-1 Is a Sensitive Indicator of Low-Level Replication of SIV and HIV-1
  2. Salisch, N. C.; Kaufmann, D. E.; Awad, A. S.; Reeves, R. K.; Tighe, D. P.; Li, Y.; Piatak, M.; Lifson, J. D.; Evans, D. T.; Pereyra, F.; Freeman, G. J.; Johnson, R. P.
  3. Journal of Immunology. 2010, Jan; 184(1): 476-487.
  1. 23.   A Novel System of Polymorphic and Diverse NK Cell Receptors in Primates
  2. Averdam, A.; Petersen, B.; Rosner, C.; Neff, J.; Roos, C.; Eberle, M.; Aujard, F.; Munich, C.; Schempp, W.; Carrington, M.; Shiina, T.; Inoko, H.; Knaust, F.; Coggill, P.; Sehra, H.; Beck, S.; Abi-Rached, L.; Reinhardt, R.; Walter, L.
  3. Plos Genetics. 2009 5(10):
  1. 24.   Immunization with Single-Cycle SIV Significantly Reduces Viral Loads After an Intravenous Challenge with SIV(mac)239
  2. Jia, B.; Ng, S. K.; DeGottardi, M. Q.; Piatak, M.; Yuste, E.; Carville, A.; Mansfield, K. G.; Li, W. J.; Richardson, B. A.; Lifson, J. D.; Evans, D. T.
  3. Plos Pathogens. 2009 5(1): 1-19.
  1. 25.   Accelerated thymic atrophy as a result of elevated homeostatic expression of the genes encoded by the TNF/lymphotoxin cytokine locus
  2. Liepinsh, D. J.; Kruglov, A. A.; Galimov, A. R.; Shakhov, A. N.; Shebzukhov, Y. V.; Kuchmiy, A. A.; Grivennikov, S. I.; Tumanov, A. V.; Drutskaya, M. S.; Feigenbaum, L.; Kuprash, D. V.; Nedospasov, S. A.
  3. European Journal of Immunology. 2009 39(10): 2906-2915.
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