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  1. 1.   Computationally Optimized SARS-CoV-2 MHC Class I and II Vaccine Formulations Predicted to Target Human Haplotype Distributions
  2. Liu, Ge; Carter, Brandon; Bricken, Trenton; Jain, Siddhartha; Viard,Mathias; Carrington,Mary; Gifford, David K
  3. Cell systems. 2020, AUG 26; 11(2): 131-144.e6.
  1. 2.   Distinct genetic architectures and environmental factors associate with host response to the gamma 2-herpesvirus infections
  2. Sallah, Neneh; Miley, Wendell; Labo, Nazzarena; Carstensen, Tommy; Fatumo, Segun; Gurdasani, Deepti; Pollard, Martin O; Dilthey, Alexander T; Mentzer, Alexander J; Marshall, Vickie; Cornejo Castro, Elena M; Pomilla, Cristina; Young, Elizabeth H; Asiki, Gershim; Hibberd, Martin L; Sandhu, Manjinder; Kellam, Paul; Newton, Robert; Whitby, Denise; Barroso, Inês
  3. Nature communications. 2020, Jul 31; 11(1): 3849.
  1. 3.   HLA heterozygote advantage against HIV-1 is driven by quantitative and qualitative differences in HLA allele-specific peptide presentation
  2. Arora, Jatin; Pierini, Federica; McLaren, Paul J; Carrington,Mary; Fellay, Jacques; Lenz, Tobias L
  3. Molecular biology and evolution. 2020, MAR; 37(3): 639-650.
  1. 4.   Identification of trophoblast-specific elements in the HLA-C core promoter
  2. Johnson, Jenna K; Wright, Paul; Li, Hongchuan; Anderson, Steve
  3. HLA. 2018, Oct 01; 92(5): 288-297.
  1. 5.   Vaccine Protection against Simian Immunodeficiency Virus in Monkeys Using Recombinant Gamma-2 Herpesvirus
  2. Bilello, J. P.; Manrique, J. M.; Shin, Y. C.; Lauer, W.; Li, W. J.; Lifson, J. D.; Mansfield, K. G.; Johnson, R. P.; Desrosiers, R. C.
  3. Journal of Virology. 2011, Dec; 85(23): 12708-12720.
  1. 6.   Characterization and polymorphic analysis of 4.5 kb genomic full-length HLA-C in the Chinese Han population
  2. Xu, Y.; Deng, Z.; O'HUigin, C.; Wang, D.; Gao, S.; Zeng, J.; Yang, B.; Jin, S.; Zou, H.
  3. Tissue Antigens. 2011, Aug; 78(2): 102-114.
  1. 7.   Spectrum of MHC Class II Variability in Darwin's Finches and Their Close Relatives
  2. Sato, A.; Tichy, H.; Grant, P. R.; Grant, B. R.; Sato, T.; O'HUigin, C.
  3. Molecular Biology and Evolution. 2011, Jun; 28(6): 1943-1956.
  1. 8.   Evolution of ABC transporters by gene duplication and their role in human disease
  2. Moitra, K.; Dean, M.
  3. Biological Chemistry. 2011, Jan; 392(1-2): 29-37.
  1. 9.   Next-generation sequencing for HLA typing of class I loci
  2. Erlich, R. L.; Jia, X. M.; Anderson, S.; Banks, E.; Gao, X. J.; Carrington, M.; Gupta, N.; DePristo, M. A.; Henn, M. R.; Lennon, N. J.; de Bakker, P. I. W.
  3. Bmc Genomics. 2011, Jan; 12: 13.
  1. 10.   Effects of thymic selection of the T-cell repertoire on HLA class I-associated control of HIV infection
  2. Kosmrlj, A.; Read, E. L.; Qi, Y.; Allen, T. M.; Altfeld, M.; Deeks, S. G.; Pereyra, F.; Carrington, M.; Walker, B. D.; Chakraborty, A. K.
  3. Nature. 2010, May; 465(7296): 350-U107.
  1. 11.   The macrophage in HIV-1 infection: From activation to deactivation?
  2. Herbein, G.; Varin, A.
  3. Retrovirology. 2010, Apr; 7: 15.
  1. 12.   MHC Heterozygote Advantage in Simian Immunodeficiency Virus-Infected Mauritian Cynomolgus Macaques
  2. O'Connor, S. L.; Lhost, J. J.; Becker, E. A.; Detmer, A. M.; Johnson, R. C.; MacNair, C. E.; Wiseman, R. W.; Karl, J. A.; Greene, J. M.; Burwitz, B. J.; Bimber, B. N.; Lank, S. M.; Tuscher, J. J.; Mee, E. T.; Rose, N. J.; Desrosiers, R. C.; Hughes, A. L.; Friedrich, T. C.; Carrington, M.; O'Connor, D. H.
  3. Science Translational Medicine. 2010, Mar; 2(22): 9.
  1. 13.   In situ detection of Gag-specific CD8(+) cells in the GI tract of SIV infected Rhesus macaques
  2. Tjernlund, A.; Zhu, J.; Laing, K.; Diem, K.; McDonald, D.; Vazquez, J.; Cao, J. H.; Ohlen, C.; McElrath, M. J.; Picker, L. J.; Corey, L.
  3. Retrovirology. 2010, Feb; 7: 14.
  1. 14.   A Novel System of Polymorphic and Diverse NK Cell Receptors in Primates
  2. Averdam, A.; Petersen, B.; Rosner, C.; Neff, J.; Roos, C.; Eberle, M.; Aujard, F.; Munich, C.; Schempp, W.; Carrington, M.; Shiina, T.; Inoko, H.; Knaust, F.; Coggill, P.; Sehra, H.; Beck, S.; Abi-Rached, L.; Reinhardt, R.; Walter, L.
  3. Plos Genetics. 2009 5(10):
  1. 15.   Immunization with Single-Cycle SIV Significantly Reduces Viral Loads After an Intravenous Challenge with SIV(mac)239
  2. Jia, B.; Ng, S. K.; DeGottardi, M. Q.; Piatak, M.; Yuste, E.; Carville, A.; Mansfield, K. G.; Li, W. J.; Richardson, B. A.; Lifson, J. D.; Evans, D. T.
  3. Plos Pathogens. 2009 5(1): 1-19.
  1. 16.   Accelerated thymic atrophy as a result of elevated homeostatic expression of the genes encoded by the TNF/lymphotoxin cytokine locus
  2. Liepinsh, D. J.; Kruglov, A. A.; Galimov, A. R.; Shakhov, A. N.; Shebzukhov, Y. V.; Kuchmiy, A. A.; Grivennikov, S. I.; Tumanov, A. V.; Drutskaya, M. S.; Feigenbaum, L.; Kuprash, D. V.; Nedospasov, S. A.
  3. European Journal of Immunology. 2009 39(10): 2906-2915.
  1. 17.   Chromosomal localization and molecular organization of the human genomic fragment containing the TNF/LT locus in transgenic mice
  2. Galimov, A. R.; Kruglov, A. A.; Bolsheva, N. L.; Yurkevich, O. Y.; Liepinsh, D. J.; Mufazalov, I. A.; Kuprash, D. V.; Nedospasov, S. A.
  3. Molecular Biology. 2008 42(4): 558-566.
  1. 18.   Contribution of CD8(+) T cells to containment of viral replication and emergence of mutations in Mamu-A*01-restricted epitopes in simian immunodeficiency virus-infected rhesus monkeys
  2. Kim, E. Y.; Veazey, R. S.; Zahn, R.; McEvers, K. J.; Baumeister, S.; Foster, G. J.; Rett, M. D.; Newberg, M. H.; Kuroda, M. J.; Rieber, E. P.; Piatak, M.; Lifson, J. D.; Letvin, N. L.; Wolinsky, S. M.; Schmitz, J. E.
  3. Journal of Virology. 2008 82(11): 5631-5635.
  1. 19.   State of cat genomics
  2. O'Brien, S. J.; Johnson, W.; Driscoll, C.; Pontius, J.; Pecon-Slattery, J.; Menotti-Raymond, M.
  3. Trends in Genetics. 2008 24(6): 268-279.
  1. 20.   CD4(+) T-cell loss and delayed expression of modulators of immune responses at mucosal sites of vaccinated macaques following SIVmac251 infection
  2. Vaccari, M.; Boasso, A.; Ma, Z. M.; Cecchinato, V.; Venzon, D.; Doster, M. N.; Tsai, W. P.; Shearer, G. M.; Fuchs, D.; Felber, B. K.; Pavlakis, G. N.; Miller, C. J.; Franchini, G.
  3. Mucosal Immunology. 2008 1(6): 497-507 DI 10.1038/mi.20.
  1. 21.   Initial sequence and comparative analysis of the cat genome
  2. Pontius, J. U.; Mullikin, J. C.; Smith, D. R.; Lindblad-Toh, K.; Gnerre, S.; Clamp, M.; Chang, J.; Stephens, R.; Neelam, B.; Volfovsky, N.; Schaffer, A. A.; Agarwala, R.; Narfstrom, K.; Murphy, W. J.; Giger, U.; Roca, A. L.; Antunes, A.; Menotti-Raymond, M.; Yuhki, N.; Pecon-Slattery, J.; Johnson, W. E.; Bourque, G.; Tesler, G.; O'Brien, S. J.; NISC Comparative Sequencing Program
  3. Genome Research. 2007, Nov; 17(11): 1675-1689.
  1. 22.   Global diversity and evidence for coevolution of KIR and HLA
  2. Single, R. M.; Martin, M. P.; Gao, X. J.; Meyer, D. G.; Yeager, M.; Kidd, J. R.; Kidd, K. K.; Carrington, M.
  3. Nature Genetics. 2007, Sep; 39(9): 1114-1119.
  1. 23.   Innate partnership of HLA-B and KIR3DL1 subtypes against HIV-1
  2. Martin, M. P.; Qi, Y.; Gao, X. J.; Yamada, E.; Martin, J. N.; Pereyra, F.; Colombo, S.; Brown, E. E.; Shupert, W. L.; Phair, J.; Goedert, J. J.; Buchbinder, S.; Kirk, G. D.; Telenti, A.; Connors, M.; O'Brien, S. J.; Walker, B. D.; Parham, P.; Deeks, S. G.; McVicar, D. W.; Carrington, M.
  3. Nature Genetics. 2007, Jun; 39(6): 733-740.
  1. 24.   Comparative genomic structure of human, dog, and cat MHC: HLA, DLA, and FLA
  2. Yuhki, N.; Beck, T.; Stephens, R.; Neelam, B.; O'Brien, S. J.
  3. Journal of Heredity. 2007 98(5): 390-399.
  1. 25.   A high-resolution HLA and SNP haplotype map for disease association studies in the extended human MHC
  2. de Bakker, P. I. W.; McVean, G.; Sabeti, P. C.; Miretti, M. M.; Green, T.; Marchini, J.; Ke, X. Y.; Monsuur, A. J.; Whittaker, P.; Delgado, M.; Morrison, J.; Richardson, A.; Walsh, E. C.; Gao, X. J.; Galver, L.; Hart, J.; Hafler, D. A.; Pericak-Vance, M.; Todd, J. A.; Daly, M. J.; Trowsdale, J.; Wijmenga, C.; Vyse, T. J.; Beck, S.; Murray, S. S.; Carrington, M.; Gregory, S.; Deloukas, P.; Rioux, J. D.
  3. Nature Genetics. 2006, Oct; 38(10): 1166-1172.
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