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  1. 1.   Harnessing molecular recognition for small molecule-mediated, reversible photochemical control over mRNA translation
  2. Parmar,Shaifaly; Tenney, Logan; Liang, Xiao; Routzahn,John; Sibley, Christopher D; Schneekloth,John
  3. Angewandte Chemie (International ed. in English). 2025, Mar 31; e202503078.
  1. 2.   Two hearts beat as one: the debate over RAS dimers continues
  2. Stephen,Andy
  3. Trends in Biochemical Sciences. 2024, Nov; 49(11): 933-935.
  1. 3.   Toehold-Mediated Shape Transition of Nucleic Acid Nanoparticles
  2. Hartung, Jordan; McCann, Nathan; Doe, Erwin; Hayth, Hannah; Benkato, Kheiria; Johnson, M Brittany; Viard,Mathias; Afonin, Kirill A; Khisamutdinov, Emil F
  3. ACS Applied Materials & Interfaces. 2023, May 19; 15(21): 25300-25312.
  1. 4.   Crystal Structure of an i-Motif from the HRAS Oncogene Promoter
  2. Li, Kevin S; Jordan, Deondre; Lin, Linda Y; McCarthy, Sawyer E; Schneekloth,Jay; Yatsunyk, Liliya A
  3. Angewandte Chemie (International ed. in English). 2023, Mar 30; e202301666.
  1. 5.   The Influence of Preanalytical Biospecimen Handling on the Measurement of B Vitamers, Amino Acids, and Other Metabolites in Blood
  2. Michels, Kara A; Weinstein, Stephanie J; Albert, Paul S; Black, Amanda; Brotzman, Michelle; Diaz-Mayoral,Norma; Gerlanc, Nicole; Huang, Wen-Yi; Sampson, Joshua N; Shreves, Alaina; Ueland, Per Magne; Wyatt, Kathleen; Wentzensen, Nicolas; Abnet, Christian C
  3. Biopreservation and Biobanking. 2023, Jan 09;
  1. 6.   Locking and Unlocking Thrombin Function Using Immunoquiescent Nucleic Acid Nanoparticles with Regulated Retention In Vivo
  2. Ke, Weina; Chandler, Morgan; Cedrone,Edward; Saito, Renata F; Rangel, Maria Cristina; de Souza Junqueira, Mara; Wang, Jian; Shi, Da; Truong, Nguyen; Richardson, Melina; Rolband, Lewis A; Dréau, Didier; Bedocs, Peter; Chammas, Roger; Dokholyan, Nikolay V; Dobrovolskaia,Marina; Afonin, Kirill A
  3. Nano Letters. 2022, Jul 05;
  1. 7.   Structural and functional insights into inhibition of human voltage-gated sodium channels by µ-conotoxin KIIIA disulfide isomers
  2. Tran, Hue N T; McMahon, Kirsten L; Deuis, Jennifer R; Vetter, Irina; Schroeder,Christina
  3. The Journal of Biological Chemistry. 2022, Feb 12; 298(3): 101728.
  1. 8.   A multiclade env-gag VLP mRNA vaccine elicits tier-2 HIV-1-neutralizing antibodies and reduces the risk of heterologous SHIV infection in macaques
  2. Zhang, Peng; Narayanan, Elisabeth; Liu, Qingbo; Tsybovsky, Yaroslav; Boswell, Kristin; Ding, Shilei; Hu, Zonghui; Follmann, Dean; Lin, Yin; Miao, Huiyi; Schmeisser, Hana; Rogers, Denise; Falcone, Samantha; Elbashir, Sayda M.; Presnyak, Vladimir; Bahl, Kapil; Prabhakaran, Madhu; Chen, Xuejun; Sarfo, Edward K.; Ambrozak, David R.; Gautam, Rajeev; Martin, Malcom A.; Swerczek, Joanna; Herbert, Richard; Weiss, Deborah; Misamore, Johnathan; Ciaramella, Giuseppe; Himansu, Sunny; Stewart-Jones, Guillaume; McDermott, Adrian; Koup, Richard A.; Mascola, John R.; Finzi, Andres; Carfi, Andrea; Fauci, Anthony S.; Lusso, Paolo
  3. Nature Medicine. 2021, Dec;
  1. 9.   Defining the Landscape of the Pauling-Corey Rippled Sheet: An Orphaned Motif Finding New Homes
  2. Raskatov, Jevgenij A.; Schneider,Joel; Nilsson, Bradley L.
  3. Accounts of chemical research. 2021, MAY 18; 54: 2488-2501.
  1. 10.   RAS Nanoclusters: Dynamic Signaling Platforms Amenable to Therapeutic Intervention
  2. Van,Que; Prakash, Priyanka; Shrestha,Rebika; Balius,Trent; Turbyville,Tommy; Stephen,Andy
  3. Biomolecules. 2021, Mar 3; 11(3):
  1. 11.   Stimuli-responsive In situ gelling system for nose-to-brain drug delivery
  2. Agrawal, Mukta; Saraf, Shailendra; Saraf, Swarnlata; Dubey, Sunil K.; Puri,Anu; Gupta, Umesh; Kesharwani, Prashant; Kumar, Pramod; Naidu, V. G. M.; Murty, Upadhyayula Suryanarayana; Alexander, Amit
  3. Journal of controlled release : official journal of the Controlled Release Society. 2020, NOV 10; 327: 235-265.
  1. 12.   HSF1 physically neutralizes amyloid oligomers to empower overgrowth and bestow neuroprotection
  2. Tang,Zijian; Su,Kuo-Hui; Xu, Meng; Dai,Chengkai
  3. Science advances. 2020, Nov; 6(46): pii: eabc6871.
  1. 13.   Animal models for COVID-19
  2. Munoz-Fontela, Cesar; Dowling, William E.; Funnell, Simon G. P.; Gsell, Pierre-S.; Riveros-Balta, A. Ximena; Albrecht, Randy A.; Andersen, Hanne; Baric, Ralph S.; Carroll, Miles W.; Cavaleri, Marco; Qin, Chuan; Crozier,Ian; Dallmeier, Kai; de Waal, Leon; de Wit, Emmie; Delang, Leen; Dohm, Erik; Duprex, W. Paul; Falzarano, Darryl; Finch, Courtney L.; Frieman, Matthew B.; Graham, Barney S.; Gralinski, Lisa E.; Guilfoyle, Kate; Haagmans, Bart L.; Hamilton, Geraldine A.; Hartman, Amy L.; Herfst, Sander; Kaptein, Suzanne J. F.; Klimstra, William B.; Knezevic, Ivana; Krause, Philip R.; Kuhn, Jens H.; Le Grand, Roger; Lewis, Mark G.; Liu, Wen-Chun; Maisonnasse, Pauline; McElroy, Anita K.; Munster, Vincent; Oreshkova, Nadia; Rasmussen, Angela L.; Rocha-Pereira, Joana; Rockx, Barry; Rodriguez, Estefania; Rogers, Thomas F.; Salguero, Francisco J.; Schotsaert, Michael; Stittelaar, Koert J.; Jan Thibaut, Hendrik; Tseng, Chien-Te; Vergara-Alert, Julia; Beer, Martin; Brasel, Trevor; Chan, Jasper F. W.; Garcia-Sastre, Adolfo; Neyts, Johan; Perlman, Stanley; Reed, Douglas S.; Richt, Juergen A.; Roy, Chad J.; Segales, Joaquim; Vasan, Seshadri S.; Henao-Restrepo, Ana Maria; Barouch, Dan H.
  3. Nature. 2020, OCT 22; 586(7830): 509-515.
  1. 14.   Tailored design of protein nanoparticle scaffolds for multivalent presentation of viral glycoprotein antigens
  2. Ueda, George; Antanasijevic, Aleksandar; Fallas, Jorge A; Sheffler, William; Copps, Jeffrey; Ellis, Daniel; Hutchinson, Geoffrey B; Moyer, Adam; Yasmeen, Anila; Tsybovsky,Yaroslav; Park, Young-Jun; Bick, Matthew J; Sankaran, Banumathi; Gillespie, Rebecca A; Brouwer, Philip Jm; Zwart, Peter H; Veesler, David; Kanekiyo, Masaru; Graham, Barney S; Sanders, Rogier W; Moore, John P; Klasse, Per Johan; Ward, Andrew B; King, Neil P; Baker, David
  3. eLife. 2020, Aug 04; 9: pii: 9:e57659.
  1. 15.   Medin Oligomer Membrane Pore Formation: A Potential Mechanism of Vascular Dysfunction
  2. Younger, Scott; Jang,Hyunbum; Davies, Hannah A; Niemiec, Martin J; Garcia, Joe G N; Nussinov,Ruth; Migrino, Raymond Q; Madine, Jillian; Arce, Fernando T
  3. Biophysical journal. 2020, JUN 2; 118(11): 2769-2782.
  1. 16.   Estimating associations between antidepressant use and incident mild cognitive impairment in older adults with depression
  2. Han, Fang; Bonnett,Tyler; Brenowitz, Willa D; Teylan, Merilee A; Besser, Lilah M; Chen, Yen-Chi; Chan, Gary; Cao, Ke-Gang; Gao, Ying; Zhou, Xiao-Hua
  3. PloS one. 2020, JAN 17; 15(1): e0227924.
  1. 17.   Adaptive in vivo device for theranostics of inflammation: real-time monitoring of interferon-? and aspirin
  2. Cao, Chaomin; Jin, Ronghua; Wei, Hui; Liu, Zhongning; Ni, Shengnan; Liu, Guo-Jun; Young,Howard; Chen, Xin; Liu, Guozhen
  3. Acta biomaterialia. 2020, Jan 1; 101: 372-383.
  1. 18.   deepDR: A network-based deep learning approach to in silico drug repositioning
  2. Zeng, Xiangxiang; Zhu, Siyi; Liu, Xiangrong; Zhou, Yadi; Nussinov,Ruth; Cheng, Feixiong
  3. Bioinformatics (Oxford, England). 2019, DEC 15; 35(24): 5191-5198.
  1. 19.   Co-crystal structure of the iMango-III fluorescent RNA aptamer using an X-ray free-electron laser
  2. Trachman, Robert J; Stagno,Jason; Conrad, Chelsie; Jones, Christopher P; Fischer, Pontus; Meents, Alke; Wang, Yun Xing; Ferré-D'Amaré, Adrian R
  3. Acta crystallographica. Section F, Structural biology communications. 2019, Aug 01; 75(Pt 8): 547-551.
  1. 20.   Viral coinfection analysis using a MinHash toolkit
  2. Dawson, Eric T; Wagner,Sarah; Roberson, David; Yeager,Meredith; Boland,Joseph; Garrison, Erik; Chanock, Stephen; Schiffman, Mark; Raine-Bennett, Tina; Lorey, Thomas; Castle, Phillip E; Mirabello, Lisa; Durbin, Richard
  3. BMC bioinformatics. 2019, Jul 12; 20(1): 389.
  1. 21.   The Human Sodium Iodide Symporter as a Reporter Gene for Studying Middle East Respiratory Syndrome Coronavirus Pathogenesis
  2. Chefer, Svetlana; Seidel, Jurgen; Cockrell, Adam S; Yount, Boyd; Solomon,Jeffrey; Hagen, Katie R; Liu, David X; Huzella, Louis M; Kumar, Mia R; Postnikova, Elena; Bohannon, J Kyle; Lackemeyer, Matthew G; Cooper, Kurt; Endlich-Frazier, Ariel; Sharma, Heema; Thomasson, David; Bartos, Christopher; Sayre, Philip J; Sims, Amy; Dyall, Julie; Holbrook, Michael R; Jahrling, Peter B; Baric, Ralph S; Johnson, Reed F
  3. mSphere. 2018, Dec 12; 3(6): pii: e00540-18.
  1. 22.   Allosteric activation of RAF in the MAPK signaling pathway
  2. Tsai,Chung-Jung; Nussinov,Ruth
  3. CURRENT OPINION IN STRUCTURAL BIOLOGY. 2018, Dec; 53: 100-106.
  1. 23.   Human monoclonal antibodies as candidate therapeutics against emerging viruses
  2. Jin, Yujia; Lei, Cheng; Hu, Dan; Dimitrov, Dimiter S; Ying, Tianlei
  3. Frontiers of medicine. 2017, Nov 20;
  1. 24.   Graphite-Templated Amyloid Nanostructures Formed by a Potential Pentapeptide Inhibitor for Alzheimer's Disease: A Combined Study of Real-Time Atomic Force Microscopy and Molecular Dynamics Simulations
  2. Li, Na; Jang, Hyunbum; Yuan, Ming; Li, Wanrong; Yun, Xiaolin; Lee, Joon; Du, Qiqige; Nussinov, Ruth; Hou, Jiahua; Lal, Ratnesh; Zhang, Feng
  3. Langmuir. 2017, Jul 11; 33(27): 6647-6656.
  1. 25.   Efficacy of antibody-based therapies against Middle East respiratory syndrome coronavirus (MERS-CoV) in common marmosets
  2. van Doremalen, Neeltje; Falzarano, Darryl; Ying, Tianlei; de Wit, Emmie; Bushmaker, Trenton; Feldmann, Friederike; Okumura, Atsushi; Wang, Yanping; Scott, Dana P; Hanley, Patrick W; Feldmann, Heinz; Dimitrov, Dimiter; Munster, Vincent J
  3. Antiviral Research. 2017, Jul; 143: 30-37.
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