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  1. 1.   Activity and structure of human (d)CTP deaminase CDADC1
  2. Slyvka, Anton; Rathore, Ishan; Yang, Renbin; Gewartowska, Olga; Kanai, Tapan; Lountos,George; Skowronek, Krzysztof; Czarnocki-Cieciura, Mariusz; Wlodawer,Alexander; Bochtler, Matthias
  3. Proceedings of the National Academy of Sciences of the United States of America. 2025, May 13; 122(19): e2424245122.
  1. 2.   A Bifunctional Phosphoglucomutase/Phosphomannomutase from Thermococcus kodakarensis: Biophysical Analysis and Cryo-EM Structure
  2. Naz, Zahra; Rathore, Ishan; Saleem, Muhammad; Rahman, Moazur; Wlodawer,Alexander; Rashid, Naeem
  3. Biomolecules. 2025, Feb 21; 15(3):
  1. 3.   Insights into biofilm architecture and maturation enable improved clinical strategies for exopolysaccharide-targeting therapeutics
  2. Temme,Joel; Tan, Zibin; Li,Mi; Yang,Mo; Wlodawer,Alexander; Huang, Xuefei; Schneekloth,Jay; Gildersleeve,Jeffrey
  3. Cell Chemical Biology. 2024, Dec 02;
  1. 4.   Cationic Residues of the HIV-1 Nucleocapsid Protein Enable DNA Condensation to Maintain Viral Core Particle Stability during Reverse Transcription
  2. Gien, Helena; Morse, Michael; McCauley, Micah J; Rouzina, Ioulia; Gorelick,Robert; Williams, Mark C
  3. Viruses. 2024, May 29; 16(6): 872.
  1. 5.   Inhibition of HIV-1 release by ADAM metalloproteinase inhibitors
  2. Ireland, Joanna; Segura, Jason; Shi,Genbin; Buchwald, Julianna; Roth, Gwynne; Shen, Thomas Juncheng; Wang, Ruipeng; Ji,Xinhua; Fischer, Elizabeth R; Moir, Susan; Chun, Tae-Wook; Sun, Peter D
  3. Frontiers in Microbiology. 2024, Mar 20; 15: 1385775.
  1. 6.   Antigen spacing on protein nanoparticles influences antibody responses to vaccination
  2. Ellis, Daniel; Dosey, Annie; Boyoglu-Barnum, Seyhan; Park, Young-Jun; Gillespie, Rebecca; Syeda, Hubza; Hutchinson, Geoffrey B; Tsybovsky,Yaroslav; Murphy, Michael; Pettie, Deleah; Matheson, Nick; Chan, Sidney; Ueda, George; Fallas, Jorge A; Carter, Lauren; Graham, Barney S; Veesler, David; Kanekiyo, Masaru; King, Neil P
  3. Cell Reports. 2023, Dec 13; 42(12): 113552.
  1. 7.   Detection of the DNA binding of transcription factors in situ at the single-cell resolution in cultured cells by proximity ligation assay
  2. Ram,Babul; Dai,Chengkai
  3. STAR Protocols. 2023, Nov 01; 4(4): 102692.
  1. 8.   Delineation of functional subdomains of Huntingtin protein and their interaction with HAP40
  2. Alteen, Matthew G; Deme,Justin; Alvarez, Claudia P; Loppnau, Peter; Hutchinson, Ashley; Seitova, Alma; Chandrasekaran, Renu; Silva Ramos, Eduardo; Secker, Christopher; Alqazzaz, Mona; Wanker, Erich E; Lea, Susan M; Arrowsmith, Cheryl H; Harding, Rachel J
  3. Structure (London, England : 1993). 2023, Sep 7; 31
  1. 9.   SARS-CoV-2 polyprotein substrate regulates the stepwise Mpro cleavage reaction
  2. Narwal, Manju; Armache, Jean-Paul; Edwards,Thomas; Murakami, Katsuhiko S
  3. The Journal of Biological Chemistry. 2023, Apr 10; 299(5): 104697.
  1. 10.   Instance segmentation of mitochondria in electron microscopy images with a generalist deep learning model trained on a diverse dataset
  2. Conrad, Ryan; Narayan,Kedar
  3. Cell Systems. 2023, Jan 18; 14(1): 58-71.e5.
  1. 11.   Double knockin mice show NF-?B trajectories in immune signaling and aging
  2. Rahman, Shah Md Toufiqur; Aqdas, Mohammad; Martin, Erik W; Tomassoni Ardori,Francesco; Songkiatisak, Preeyaporn; Oh, Kyu-Seon; Uderhardt, Stefan; Yun, Sangwon; Claybourne, Quia C; McDevitt, Ross A; Greco, Valentina; Germain, Ronald N; Tessarollo, Lino; Sung, Myong-Hee
  3. Cell Reports. 2022, Nov 22; 41(8): 111682.
  1. 12.   The progressive spectral signal-to-noise ratio of cryo-electron micrograph movies as a tool to assess quality and radiation damage
  2. Heymann,Bernard
  3. Computer Methods and Programs in Biomedicine. 2022, Apr 03; 220: 106799.
  1. 13.   HIV-1 Nucleocapsid Protein Binds Double-Stranded DNA in Multiple Modes to Regulate Compaction and Capsid Uncoating
  2. Gien, Helena; Morse, Michael; McCauley, Micah J; Kitzrow, Jonathan P; Musier-Forsyth, Karin; Gorelick,Robert; Rouzina, Ioulia; Williams, Mark C
  3. Viruses. 2022, Jan 25; 14(2):
  1. 14.   Multiparameter immunohistochemistry analysis of HIV DNA, RNA and immune checkpoints in lymph node tissue
  2. Richardson, Zuwena A; Deleage,Claire; Tutuka, Candani S A; Walkiewicz, Marzena; Del Río-Estrada, Perla M; Pascoe, Rachel D; Evans, Vanessa A; Reyesteran, Gustavo; Gonzales, Michael; Roberts-Thomson, Samuel; González-Navarro, Mauricio; Torres-Ruiz, Fernanda; Estes, Jacob D; Lewin, Sharon R; Cameron, Paul U
  3. Journal of Immunological Methods. 2021, Dec 01; 113198.
  1. 15.   The HIV-1 Nucleocapsid Regulates Its Own Condensation by Phase-Separated Activity-Enhancing Sequestration of the Viral Protease during Maturation
  2. Lyonnais, Sébastien; Sadiq, S Kashif; Lorca-Oró, Cristina; Dufau, Laure; Nieto-Marquez, Sara; Escribà, Tuixent; Gabrielli, Natalia; Tan, Xiao; Ouizougun-Oubari, Mohamed; Okoronkwo, Josephine; Reboud-Ravaux, Michèle; Gatell, José Maria; Marquet, Roland; Paillart, Jean-Christophe; Meyerhans, Andreas; Tisné, Carine; Gorelick,Robert; Mirambeau, Gilles
  3. Viruses. 2021, Nov 19; 13(11):
  1. 16.   A combined approach to characterize ligand-induced solid-solid phase transitions in biomacromolecular crystals
  2. Ramakrishnan, Saminathan; Stagno,Jason; Magidson,Valentin; Heinz,Will; Wang,Yun-Xing
  3. Journal of applied crystallography. 2021, Jun 01; 54(Pt 3): 787-796.
  1. 17.   A Workflow for High-pressure Freezing and Freeze Substitution of the Caenorhabditis elegans Embryo for Ultrastructural Analysis by Conventional and Volume Electron Microscopy
  2. Rahman, Mohammad M.; Chang, Irene Y.; Cohen-Fix, Orna; Narayan,Kedar
  3. Bio-Protocol. 2021, Apr 5; 11(7):
  1. 18.   Structural mimicry drives HIV-1 Rev-mediated HERV-K expression
  2. O'Carroll, Ina P; Fan,Lixin; Kroupa,Tomas; McShane, Erin K; Theodore, Christophe; Yates, Elizabeth A; Kondrup, Benjamin; Ding,Jienyu; Martin, Tyler S; Rein,Alan; Wang,Yun-Xing
  3. Journal of molecular biology. 2020, Dec 4; 432(24): pii: S0022-2836(20)30630-6.
  1. 19.   A Deep Learning Pipeline for Nucleus Segmentation
  2. Zaki,George; Gudla, Prabhakar R; Lee, Kyunghun; Kim, Justin; Ozbun, Laurent; Shachar, Sigal; Gadkari, Manasi; Sun, Jing; Fraser, Iain D C; Franco, Luis M; Misteli, Tom; Pegoraro, Gianluca
  3. CYTOMETRY PART A. 2020, NOV 19;
  1. 20.   Protein-Assisted Room-Temperature Assembly of Rigid, Immobile Holliday Junctions and Hierarchical DNA Nanostructures
  2. Ramakrishnan,Saminathan; Subramaniam, Sivaraman; Kielar, Charlotte; Grundmeier, Guido; Stewart, A. Francis; Keller, Adrian
  3. MOLECULES. 2020, NOV; 25(21):
  1. 21.   Biphasic Packing of DNA and Internal Proteins in Bacteriophage T4 Heads Revealed by Bubblegram Imaging
  2. Wu,Weimin; Cheng, Naiqian; Black, Lindsay W.; Dietz, Hendrik; Steven, Alasdair C.
  3. VIRUSES-BASEL. 2020, NOV; 12(11):
  1. 22.   Structure Determination from Lipidic Cubic Phase Embedded Microcrystals by MicroED
  2. Zhu, Lan; Bu, Guanhong; Jing, Liang; Shi,Dan; Lee, Ming-Yue; Gonen, Tamir; Liu, Wei; Nannenga, Brent L
  3. Structure (London, England : 1993). 2020, OCT 6; 28(10): 1149-+.
  1. 23.   The LTB4-BLT1 axis regulates actomyosin and beta(2)-integrin dynamics during neutrophil extravasation
  2. Subramanian, Bhagawat C.; Melis, Nicolas; Chen, Desu; Wang, Weiye; Gallardo,Devorah; Weigert, Roberto; Parent, Carole A.
  3. JOURNAL OF CELL BIOLOGY. 2020, OCT 5; 219(10):
  1. 24.   The Mottled Capsid of the Salmonella Giant Phage SPN3US, a Likely Maturation Intermediate with a Novel Internal Shell
  2. Heymann, J Bernard; Wang, Bing; Newcomb, William W; Wu,Weimin; Winkler, Dennis C; Cheng, Naiqian; Reilly, Erin R; Hsia, Ru-Ching; Thomas, Julie A; Steven, Alasdair C
  3. Viruses. 2020, Aug 19; 12(9): pii: E910..
  1. 25.   Networks of HIV-1 Envelope Glycans Maintain Antibody Epitopes in the Face of Glycan Additions and Deletions
  2. Seabright, Gemma E; Cottrell, Christopher A; van Gils, Marit J; D'addabbo, Alessio; Harvey, David J; Behrens, Anna-Janina; Allen, Joel D; Watanabe, Yasunori; Scaringi, Nicole; Polveroni, Thomas M; Maker, Allison; Vasiljevic, Snezana; De Val Alda,Natalia; Sanders, Rogier W; Ward, Andrew B; Crispin, Max
  3. Structure (London, England : 1993). 2020, AUG 4; 28(8): 897-+.
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