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  1. 1.   Highly immunogenic DNA/LION nanocarrier vaccine potently activates lymph nodes inducing long-lasting immunity in macaques
  2. Moussa,Maha; Moussa,Maha; Rosati,Margherita; Devasundaram, Santhi; Sengupta, Soumya; Goldfarbmuren,Katherine; Burns,Robert; Bear,Jenifer; Stellas, Dimitris; Urban,Elizabeth; Deleage,Claire; Khandhar, Amit P; Erasmus, Jesse; Berglund, Peter; Reed, Steven G; Pavlakis,George; Felber,Barbara
  3. iScience. 2025, Apr 18; 28(4): 112232.
  1. 2.   Toehold-Mediated Shape Transition of Nucleic Acid Nanoparticles
  2. Hartung, Jordan; McCann, Nathan; Doe, Erwin; Hayth, Hannah; Benkato, Kheiria; Johnson, M Brittany; Viard,Mathias; Afonin, Kirill A; Khisamutdinov, Emil F
  3. ACS Applied Materials & Interfaces. 2023, May 19; 15(21): 25300-25312.
  1. 3.   Evaluation of Nonmodified Wireframe DNA Origami for Acute Toxicity and Biodistribution in Mice
  2. Wamhoff, Eike-Christian; Knappe, Grant A; Burds, Aurora A; Du, Rebecca R; Neun,Barry; Difilippantonio,Simone; Sanders,Chelsea; Edmondson,Elijah; Matta,Jennifer; Dobrovolskaia,Marina; Bathe, Mark
  3. ACS Applied Bio Materials. 2023, Apr 11;
  1. 4.   Artificial Immune Cell, AI-cell, a New Tool to Predict Interferon Production by Peripheral Blood Monocytes in Response to Nucleic Acid Nanoparticles
  2. Chandler, Morgan; Jain, Sankalp; Halman, Justin; Hong, Enping; Dobrovolskaia,Marina; Zakharov, Alexey V; Afonin, Kirill A
  3. Small (Weinheim an der Bergstrasse, Germany). 2022, Oct 10; e2204941.
  1. 5.   Targetable conformationally restricted cyanines enable photon-count limited applications
  2. Eiring, Patrick; McLaughlin, Ryan; Matikonda,Siddharth; Han, Zhongying; Grabenhorst, Lennart; Helmerich, Dominic A; Meub, Mara; Beliu, Gerti; Luciano,Michael; Bandi, Venu; Zijlstra, Niels; Shi, Zhen-Dan; Tarasov,Sergey; Swenson, Rolf; Tinnefeld, Philip; Glembockyte, Viktorija; Cordes, Thorben; Sauer, Markus; Schnermann,Martin
  3. Angewandte Chemie (International ed. in English). 2021, Oct 04;
  1. 6.   Challenges in the development of nanoparticle-based imaging agents: Characterization and biology
  2. Crist,Rachael; Dasa,Siva Sai Krishna; Liu, Christina H.; Clogston,Jeffrey; Dobrovolskaia,Marina; Stern,Steve
  3. Wiley interdisciplinary reviews. Nanomedicine and nanobiotechnology. 2020, Aug 23;
  1. 7.   A reanalysis of nanoparticle tumor delivery using classical pharmacokinetic metrics
  2. Price, Lauren S. L.; Stern,Steve; Deal, Allison M.; Kabanov, Alexander; Zamboni, William C.
  3. SCIENCE ADVANCES. 2020, JUL; 6(29): eaay9249.
  1. 8.   Characterization of Cationic Bolaamphiphile Vesicles for siRNA Delivery into Tumors and Brain
  2. Kim, Taejin; Viard,Mathias; Afonin, Kirill A; Gupta, Kshitij; Popov, Mary; Salotti,Jacqueline; Johnson,Peter; Linder, Charles; Heldman, Eliahu; Shapiro,Bruce
  3. Molecular therapy. Nucleic acids. 2020, JUN 5; 20: 359-372.
  1. 9.   Nucleic Acid Nanoparticles at a Crossroads of Vaccines and Immunotherapies
  2. Dobrovolskaia,Marina
  3. Molecules (Basel, Switzerland). 2019, Dec; 24(24):
  1. 10.   Real-Time Observation of Superstructure-Dependent DNA Origami Digestion by DNase I Using High-Speed Atomic Force Microscopy
  2. Ramakrishnan,Saminathan; Shen, Boxuan; Kostiainen, Mauri A.; Grundmeier, Guido; Keller, Adrian; Linko, Veikko
  3. CHEMBIOCHEM. 2019, OCT 11;
  1. 11.   RNA Fibers as Optimized Nanoscaffolds for siRNA Coordination and Reduced Immunological Recognition
  2. Rackley, Lauren; Stewart, Jaimie Marie; Salotti, Jacqueline; Krokhotin, Andrey; Shah, Ankit; Halman, Justin R.; Juneja, Ridhima; Smollett, Jaclyn; Lee, Lauren; Roark, Kyle; Viard, Mathias; Tarannum, Mubin; Vivero-Escoto, Juan; Johnson, Peter; Dobrovolskaia, Marina; Dokholyan, Nikolay V.; Franco, Elisa; Afonin, Kirill A.
  3. ADVANCED FUNCTIONAL MATERIALS. 2018, Nov 28; 28(48):
  1. 12.   Cholecystokinin Receptor-Targeted Polyplex Nanoparticle Inhibits Growth and Metastasis of Pancreatic Cancer
  2. Burks, Julian; Nadella, Sandeep; Mahmud, Abdullah; Mankongpaisarnrung, Charoen; Wang, Juan; Hahm, Jong-In; Tucker, Robin D; Shivapurkar, Narayan; Stern, Steve; Smith, Jill P
  3. Cellular and Molecular Gastroenterology and Hepatology. 2018, Mar 07; 6(1): 17-32.
  1. 13.   Integration among databases and data sets to support productive nanotechnology: Challenges and recommendations
  2. Karcher, Sandra; Willighagen, Egon L.; Rumble, John; Ehrhart, Friederike; Evelo, Chris T.; Fritts, Martin; Gaheen, Sharon; Harper, Stacey L.; Hoover, Mark D.; Jeliazkova, Nina; Lewinski, Nastassja; Robinson, Richard L. Marchese; Mills, Karmann C.; Mustad, Axel P.; Thomas, Dennis G.; Tsiliki, Georgia; Hendren, Christine Ogilvie
  3. NanoImpact. 2018, Jan; 9: 85-101.
  1. 14.   Programmable Nucleic Acid Based Polygons with Controlled Neuroimmunomodulatory Properties for Predictive QSAR Modeling
  2. Johnson, Morgan Brittany; Halman, Justin R; Satterwhite, Emily; Zakharov, Alexey V; Bui, My N; Benkato, Kheiria; Goldsworthy, Victoria; Kim, Taejin; Hong, Enping; Dobrovolskaia, Marina; Khisamutdinov, Emil F; Marriott, Ian; Afonin, Kirill A
  3. Small. 2017, Nov 13; 13(42): 1701255.
  1. 15.   Functionally-interdependent shape-switching nanoparticles with controllable properties
  2. Halman, Justin R.; Satterwhite, Emily; Roark, Brandon; Chandler, Morgan; Viard, Mathias; Ivanina, Anna; Bindewald, Eckart; Kasprzak, Wojciech; Panigaj, Martin; Bui, My N.; Lu, Jacob S.; Miller, Johann; Khisamutdinov, Emil F.; Shapiro, Bruce; Dobrovolskaia, Marina; Afonin, Kirill A.
  3. NUCLEIC ACIDS RESEARCH. 2017, Feb 28; 45(4): 2210-2220.
  1. 16.   Preparation of a Conditional RNA Switch.
  2. Zakrevsky, Paul; Parlea, Lorena; Viard, Mathias; Bindewald, Eckart; Afonin, Kirill A; Shapiro, Bruce
  3. Methods in molecular biology (Clifton, N.J.). 2017 1632: 303-324.
  1. 17.   Configuration-dependent Presentation of Multivalent IL-15:IL-15Ralpha Enhances the Antigen-specific T Cell Response and Anti-tumor Immunity
  2. Hong, E.; Usiskin, I. M.; Bergamaschi, C.; Hanlon, D. J.; Edelson, R. L.; Justesen, S.; Pavlakis, G. N.; Flavell, R. A.; Fahmy, T. M.
  3. The Journal of biological chemistry. 2016, 22-Apr; 291(17): 8931-50.
  1. 18.   Design and self-assembly of siRNA-functionalized RNA nanoparticles for use in automated nanomedicine
  2. Afonin, K. A.; Grabow, W. W.; Walker, F. M.; Bindewald, E.; Dobrovolskaia, M. A.; Shapiro, B. A.; Jaeger, L.
  3. Nature Protocols. 2011, Dec; 6(12): 2022-2034.
  1. 19.   Structural plasticity of a transmembrane peptide allows self-assembly into biologically active nanoparticles
  2. Tarasov, S. G.; Gaponenko, V.; Howard, O. M. Z.; Chen, Y. H.; Oppenheim, J. J.; Dyba, M. A.; Subramaniam, S.; Lee, Y.; Michejda, C.; Tarasova, N. I.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2011, Jun; 108(24): 9798-9803.
  1. 20.   Use of RNA structure flexibility data in nanostructure modeling
  2. Kasprzak, W.; Bindewald, E.; Kim, T. J.; Jaeger, L.; Shapiro, B. A.
  3. Methods. 2011, Jun; 54(2): 239-250.
  1. 21.   Self-Assembling RNA Nanorings Based on RNAI/II Inverse Kissing Complexes
  2. Grabow, W. W.; Zakrevsky, P.; Afonin, K. A.; Chworos, A.; Shapiro, B. A.; Jaeger, L.
  3. Nano Letters. 2011, Feb; 11(2): 878-887.
  1. 22.   Informatics and standards for nanomedicine technology
  2. Thomas, D. G.; Klaessig, F.; Harper, S. L.; Fritts, M.; Hoover, M. D.; Gaheen, S.; Stokes, T. H.; Reznik-Zellen, R.; Freund, E. T.; Klemm, J. D.; Paik, D. S.; Baker, N. A.
  3. Wiley Interdisciplinary Reviews-Nanomedicine and Nanobiotechnology. 2011, Sep-Oct; 3(5): 511-532.
  1. 23.   Translational considerations for cancer nanomedicine
  2. Stern, S. T.; Hall, J. B.; Yu, L. L.; Wood, L. J.; Paciotti, G. F.; Tamarkin, L.; Long, S. E.; McNeil, S. E.
  3. Journal of Controlled Release. 2010, Sep; 146(2): 164-174.
  1. 24.   In vitro assembly of cubic RNA-based scaffolds designed in silico
  2. Afonin, K. A.; Bindewald, E.; Yaghoubian, A. J.; Voss, N.; Jacovetty, E.; Shapiro, B. A.; Jaeger, L.
  3. Nature Nanotechnology. 2010, Sep; 5(9): 676-682.
  1. 25.   Radioactive gold nanoparticles in cancer therapy: therapeutic efficacy studies of GA-(AuNP)-Au-198 nanoconstruct in prostate tumor-bearing mice
  2. Chanda, N.; Kan, P.; Watkinson, L. D.; Shukla, R.; Zambre, A.; Carmack, T. L.; Engelbrecht, H.; Lever, J. R.; Katti, K.; Fent, G. M.; Casteel, S. W.; Smith, C. J.; Miller, W. H.; Jurisson, S.; Boote, E.; Robertson, J. D.; Cutler, C.; Dobrovolskaia, M.; Kannan, R.; Katti, K. V.
  3. Nanomedicine-Nanotechnology Biology and Medicine. 2010, Apr; 6(2): 201-209.
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