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  1. 1.   Deletion of a single CTCF motif at the boundary of a chromatin domain with three FGF genes disrupts gene expression and embryonic development
  2. Chakraborty, Shreeta; Wenzlitschke, Nina; Anderson,Matthew; Eraso, Ariel; Baudic, Manon; Thompson, Joyce J; Evans, Alicia A; Shatford-Adams, Lilly M; Chari,Raj; Awasthi,Roackie; Dale, Ryan K; Lewandoski,Mark; Petros, Timothy J; Rocha, Pedro P
  3. Developmental Cell. 2025, Feb 24;
  1. 2.   Self-extinguishing relay waves enable homeostatic control of human neutrophil swarming
  2. Strickland, Evelyn; Pan, Deng; Godfrey, Christian; Kim, Julia S; Hopke, Alex; Ji, Wencheng; Degrange,Maureen; Villavicencio, Bryant; Mansour, Michael K; Zerbe, Christa S; Irimia, Daniel; Amir, Ariel; Weiner, Orion D
  3. Developmental Cell. 2024, Oct 7; 59(19): 2659-2671.
  1. 3.   Stability and gene strand bias of lambda prophages and chromosome organization in Escherichia coli
  2. Li, Xintian; Gallardo, Oscar; August, Elias; Dassa, Bareket; Court,Don; Stavans, Joel; Arbel-Goren, Rinat
  3. mBio. 2024, Jun 18; e0207823.
  1. 4.   Endogenous EWSR1 Exists in Two Visual Modalities That Reflect Its Associations with Nucleic Acids and Concentration at Sites of Active Transcription
  2. Sundara Rajan, Soumya; Ebegboni, Vernon J; Pichling, Patricio; Ludwig, Katelyn R; Jones, Tamara L; Chari,Raj; Tran, Andy; Kruhlak, Michael J; Loncarek,Jadranka; Caplen, Natasha J
  3. Molecular and Cellular Biology. 2024, Mar 20; 44(3): 103-122.
  1. 5.   Signaling in the crowded cell
  2. Nussinov,Ruth; Tsai,Chung-Jung; Jang,Hyunbum
  3. Current Opinion in Structural Biology. 2021, Dec; 71: 43-50.
  1. 6.   Controlled Organization of Inorganic Materials Using Biological Molecules for Activating Therapeutic Functionalities
  2. Chandler, Morgan; Minevich, Brian; Roark, Brandon; Viard,Mathias; Johnson, M Brittany; Rizvi, Mehedi H; Deaton, Thomas A; Kozlov, Seraphim; Panigaj, Martin; Tracy, Joseph B; Yingling, Yaroslava G; Gang, Oleg; Afonin, Kirill A
  3. ACS applied materials & interfaces. 2021, Aug 25; 13(33): 39030-39041.
  1. 7.   An optimized protocol for retina single-cell RNA sequencing
  2. Fadl, Benjamin R.; Brodie,Seth; Malasky,Michael; Boland,Joseph; Kelly,Michael; Kelley, Matthew W.; Boger, Erich; Fariss, Robert; Swaroop, Anand; Campello, Laura
  3. MOLECULAR VISION. 2020, OCT 10; 26: 705-717.
  1. 8.   Translating Embryogenesis to Generate Organoids: Novel Approaches to Personalized Medicine
  2. Sahu,Sounak; Sharan,Shyam
  3. iScience. 2020, SEP 25; 23(9):
  1. 9.   Phase separation of Polo-like kinase 4 by autoactivation and clustering drives centriole biogenesis
  2. Park, Jung-Eun; Zhang, Liang; Bang, Jeong Kyu; Andresson,Thorkell; DiMaio, Frank; Lee, Kyung S
  3. Nature communications. 2019, Oct 31; 10(1): 4959.
  1. 10.   Clathrin light chain A drives selective myosin VI recruitment to clathrin-coated pits under membrane tension
  2. Biancospino, Matteo; Buel,Gwen; Niño, Carlos A; Maspero, Elena; di Perrotolo, Rossella Scotto; Raimondi, Andrea; Redlingshöfer, Lisa; Weber, Janine; Brodsky, Frances M; Walters,Kylie; Polo, Simona
  3. Nature communications. 2019, Oct 31; 10(1): 4974.
  1. 11.   Spatial organization of RNA polymerase and its relationship with transcription in Escherichia coli
  2. Weng, Xiaoli; Bohrer, Christopher H; Bettridge, Kelsey; Lagda, Arvin Cesar; Cagliero, Cedric; Jin, Ding Jun; Xiao, Jie
  3. Proceedings of the National Academy of Sciences of the United States of America. 2019, OCT 1; 116(40): 20115-20123.
  1. 12.   Nucleolus-like compartmentalization of the transcription machinery in fast-growing bacterial cells
  2. Jin, Ding; Mata Martin, Carmen; Sun, Zhe; Cagliero, Cedric; Zhou, Yan
  3. Critical reviews in biochemistry and molecular biology. 2017, Feb; 52(1): 96-106.
  1. 13.   Systemic flaws cannot be fixed with minor tweaks
  2. Cuss, S. M.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2014, 1-Jul; 111(26): E2635.
  1. 14.   Gene-specific transcription activation via long-range allosteric shape-shifting
  2. Tsai, C. J.; Nussinov, R.
  3. Biochemical Journal. 2011, Oct; 439: 15-25.
  1. 15.   Enhanced Mechanical Rigidity of Hydrogels Formed from Enantiomeric Peptide Assemblies
  2. Nagy, K. J.; Giano, M. C.; Jin, A.; Pochan, D. J.; Schneider, J. P.
  3. Journal of the American Chemical Society. 2011, Sep; 133(38): 14975-14977.
  1. 16.   The Cytoskeletal Adaptor Protein Band 4.1B Is Required for the Maintenance of Paranodal Axoglial Septate Junctions in Myelinated Axons
  2. Buttermore, E. D.; Dupree, J. L.; Cheng, J.; An, X. L.; Tessarollo, L.; Bhat, M. A.
  3. Journal of Neuroscience. 2011, Jun; 31(22): 8013-8024.
  1. 17.   Impact of chromatin structure on sequence variability in the human genome
  2. Tolstorukov, M. Y.; Volfovsky, N.; Stephens, R. M.; Park, P. J.
  3. Nature Structural & Molecular Biology. 2011, Apr; 18(4): 510-U152.
  1. 18.   Evolution of domain promiscuity in eukaryotic genomes-a perspective from the inferred ancestral domain architectures
  2. Cohen-Gihon, I.; Fong, J. H.; Sharan, R.; Nussinov, R.; Przytycka, T. M.; Panchenko, A. R.
  3. Molecular Biosystems. 2011, Mar 1; 7(3): 784-792.
  1. 19.   Screening Low-Frequency SNPS From Genome-Wide Association Study Reveals a New Risk Allele for Progression to AIDS
  2. Le Clerc, S.; Coulonges, C.; Delaneau, O.; Van Manen, D.; Herbeck, J. T.; Limou, S.; An, P.; Martinson, J. J.; Spadoni, J. L.; Therwath, A.; Veldink, J. H.; van den Berg, L. H.; Taing, L.; Labib, T.; Mellak, S.; Montes, M.; Delfraissy, J. F.; Schachter, F.; Winkler, C.; Froguel, P.; Mullins, J. I.; Schuitemaker, H.; Zagury, J. F.
  3. Jaids-Journal of Acquired Immune Deficiency Syndromes. 2011, Mar; 56(3): 279-284.
  1. 20.   Genome-wide characterization of centromeric satellites from multiple mammalian genomes
  2. Alkan, C.; Cardone, M. F.; Catacchio, C. R.; Antonacci, F.; O'Brien, S. J.; Ryder, O. A.; Purgato, S.; Zoli, M.; Della Valle, G.; Eichler, E. E.; Ventura, M.
  3. Genome Research. 2011, Jan; 21(1): 137-145.
  1. 21.   Structural Model of the Pre-pore Ring-like Structure of Panton-Valentine Leukocidin: Providing Dimensionality to Biophysical and Mutational Data
  2. Aman, M. J.; Karauzum, H.; Bowden, M. G.; Nguyen, T. L.
  3. Journal of Biomolecular Structure & Dynamics. 2010, Aug; 28(1): 1-12.
  1. 22.   Ultrastructural localization of extracellular matrix proteins of the lymph node cortex: evidence supporting the reticular network as a pathway for lymphocyte migration
  2. Sobocinski, G. P.; Toy, K.; Bobrowski, W. F.; Shaw, S.; Anderson, A. O.; Kaldjian, E. P.
  3. Bmc Immunology. 2010, Aug; 11: 11.
  1. 23.   Evaluation of a library outreach program to research labs
  2. Brandenburg, M. D.; Doss, A.; Frederick, T. E.
  3. Medical reference services quarterly. 2010, Jul; 29(3): 249-59.
  1. 24.   Feline immunodeficiency virus (FIV) in wild Pallas' cats
  2. Brown, M. A.; Munkhtsog, B.; Troyer, J. L.; Ross, S.; Sellers, R.; Fine, A. E.; Swanson, W. F.; Roelke, M. E.; O'Brien, S. J.
  3. Veterinary Immunology and Immunopathology. 2010, Mar; 134(1-2): 90-95.
  1. 25.   Anti-HIV-1 therapeutics: from FDA-approved drugs to hypothetical future targets
  2. Adamson, C. S.; Freed, E. O.
  3. Molecular Interventions. 2009, Apr; 9(2): 70-4.
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