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  1. 1.   deepDR: A network-based deep learning approach to in silico drug repositioning
  2. Zeng, Xiangxiang; Zhu, Siyi; Liu, Xiangrong; Zhou, Yadi; Nussinov,Ruth; Cheng, Feixiong
  3. Bioinformatics (Oxford, England). 2019, DEC 15; 35(24): 5191-5198.
  1. 2.   Structural host- microbiota interaction networks
  2. Guven-Maiorov, Emine; Tsai, Chung-Jung; Nussinov, Ruth
  3. PLOS COMPUTATIONAL BIOLOGY. 2017, OCT; 13(10):
  1. 3.   How can computation advance microbiome research?
  2. Nussinov, Ruth; Papin, Jason A.
  3. PLOS COMPUTATIONAL BIOLOGY. 2017, Sep; 13(9):
  1. 4.   Autophagy down regulates pro-inflammatory mediators in BV2 microglial cells and rescues both LPS and alpha-synuclein induced neuronal cell death
  2. Bussi, Claudio; Peralta Ramos, Javier Maria; Arroyo, Daniela S.; Gaviglio, Emilia A.; Ignacio Gallea, Jose; Wang, Jiming; Soledad Celej, Maria; Iribarren, Pablo
  3. SCIENTIFIC REPORTS. 2017, 2017-03-03; 7
  1. 5.   Dopaminergic Neuronal Loss, Reduced Neurite Complexity and Autophagic Abnormalities in Transgenic Mice Expressing G2019S Mutant LRRK2
  2. Ramonet, D.; Daher, J. P. L.; Lin, B. M.; Stafa, K.; Kim, J.; Banerjee, R.; Westerlund, M.; Pletnikova, O.; Glauser, L.; Yang, L. C.; Liu, Y.; Swing, D. A.; Beal, M. F.; Troncoso, J. C.; McCaffery, J. M.; Jenkins, N. A.; Copeland, N. G.; Galter, D.; Thomas, B.; Lee, M. K.; Dawson, T. M.; Dawson, V. L.; Moore, D. J.
  3. Plos One. 2011, Apr; 6(4):
  1. 6.   Synphilin-1 attenuates neuronal degeneration in the A53T alpha-synuclein transgenic mouse model
  2. Smith, W. W.; Liu, Z. H.; Liang, Y. D.; Masuda, N.; Swing, D. A.; Jenkins, N. A.; Copeland, N. G.; Troncoso, J. C.; Pletnikov, M.; Dawson, T. M.; Martin, L. J.; Moran, T. H.; Lee, M. K.; Borchelt, D. R.; Ross, C. A.
  3. Human Molecular Genetics. 2010, Jun; 19(11): 2087-2098.
  1. 7.   Potential Role of alpha-Synuclein and Metallothionein in Lead-Induced Inclusion Body Formation
  2. Zuo, P. J.; Qu, W.; Cooper, R. N.; Goyer, R. A.; Diwan, B. A.; Waalkes, M. P.
  3. Toxicological Sciences. 2009 111(1): 100-108.
  1. 8.   New structures help the modeling of toxic amyloid beta ion channels
  2. Jang, H. B.; Zheng, J.; Lal, R.; Nussinov, R.
  3. Trends in Biochemical Sciences. 2008 33(2): 91-100.
  1. 9.   The role of electrophoresis in disease biomarker discovery
  2. Issaq, H. J.; Veenstra, T. D.
  3. Electrophoresis. 2007, Jun; 28(12): 1980-1988.
  1. 10.   A glutathione S-transferase pi-activated prodrug causes kinase activation concurrent with S-glutathionylation of proteins
  2. Townsend, D. M.; Findlay, V. J.; Fazilev, F.; Ogle, M.; Fraser, J.; Saavedra, J. E.; Ji, X. H.; Keefer, L. K.; Tew, K. D.
  3. Molecular Pharmacology. 2006, FEB; 69(2): 501-508.
  1. 11.   Proteome analysis of DNA damage-induced neuronal death using high throughput mass spectrometry
  2. Johnson, M. D.; Yu, L. R.; Conrads, T. P.; Kinoshita, Y.; Uo, T.; Matthews, J. D.; Lee, S. W.; Smith, R. D.; Veenstra, T. D.; Morrison, R. S.
  3. Journal of Biological Chemistry. 2004 279(25): 26685-26697.
  1. 12.   Human neurodegenerative disease modeling using Drosophila
  2. Bonini, N. M.; Fortini, M. E.
  3. Annual Review of Neuroscience. 2003 26: 627-656.
  1. 13.   Constitutive expression and localization of the major drug metabolizing enzyme, cytochrome P4502D in human brain
  2. Chinta, S. J.; Pai, H. V.; Upadhya, S. C.; Boyd, M. R.; Ravindranath, V.
  3. Molecular Brain Research. 2002 103(1-2): 49-61.
  1. 14.   Protein thiol oxidation by haloperidol results in inhibition of mitochondrial complex I in brain regions: comparison with atypical antipsychotics
  2. Balijepalli, S.; Kenchappa, R. S.; Boyd, M. R.; Ravindranath, V.
  3. Neurochemistry International. 2001 38(5): 425-435.
  1. 15.   Effect of thiol modification on brain mitochondrial complex I activity
  2. Balijepalli, S.; Annepu, J.; Boyd, M. R.; Ravindranath, V.
  3. Neuroscience Letters. 1999 272(3): 203-206.
  1. 16.   Inhibition of mitochondrial complex I by haloperidol: the role of thiol oxidation
  2. Balijepalli, S.; Boyd, M. R.; Ravindranath, V.
  3. Neuropharmacology. 1999 38(4): 567-577.
  1. 17.   Thiol oxidation and loss of mitochondrial complex I precede excitatory amino acid-mediated neurodegeneration
  2. Sriram, K.; Shankar, S. K.; Boyd, M. R.; Ravindranath, V.
  3. Journal of Neuroscience. 1998 18(24): 10287-10296.
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