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  1. 1.   The MHC in the era of next-generation sequencing: Implications for bridging structure with function
  2. Petersdorf, Effie W.; Ohuigin,Colm
  3. HUMAN IMMUNOLOGY. 2019, Jan; 80(1): 67-78.
  1. 2.   Genotypic and functional impact of HIV-1 adaptation to its host population during the North American epidemic
  2. Cotton, L. A.; Kuang, X. T.; Le, A. Q.; Carlson, J. M.; Chan, B.; Chopera, D. R.; Brumme, C. J.; Markle, T. J.; Martin, E.; Shahid, A.; Anmole, G.; Mwimanzi, P.; Nassab, P.; Penney, K. A.; Rahman, M. A.; Milloy, M. J.; Schechter, M. T.; Markowitz, M.; Carrington, M.; Walker, B. D.; Wagner, T.; Buchbinder, S.; Fuchs, J.; Koblin, B.; Mayer, K. H.; Harrigan, P. R.; Brockman, M. A.; Poon, A. F.; Brumme, Z. L.
  3. Plos Genetics. 2014, Apr; 10(4): e1004295.
  1. 3.   Taxonomic revision of the genus Galictis (Carnivora: Mustelidae): species delimitation, morphological diagnosis, and refined mapping of geographical distribution
  2. Bornholdt, R.; Helgen, K.; Koepfli, K. P.; Oliveira, L.; Lucherini, M.; Eizirik, E.
  3. Zoological Journal of the Linnean Society. 2013, Mar; 167(3): 449-472.
  1. 4.   Spectrum of MHC Class II Variability in Darwin's Finches and Their Close Relatives
  2. Sato, A.; Tichy, H.; Grant, P. R.; Grant, B. R.; Sato, T.; O'HUigin, C.
  3. Molecular Biology and Evolution. 2011, Jun; 28(6): 1943-1956.
  1. 5.   Genome-wide characterization of centromeric satellites from multiple mammalian genomes
  2. Alkan, C.; Cardone, M. F.; Catacchio, C. R.; Antonacci, F.; O'Brien, S. J.; Ryder, O. A.; Purgato, S.; Zoli, M.; Della Valle, G.; Eichler, E. E.; Ventura, M.
  3. Genome Research. 2011, Jan; 21(1): 137-145.
  1. 6.   Pattern and timing of diversification of the mammalian order Carnivora inferred from multiple nuclear gene sequences
  2. Eizirik, E.; Murphy, W. J.; Koepfli, K. P.; Johnson, W. E.; Dragoo, J. W.; Wayne, R. K.; O'Brien, S. J.
  3. Molecular Phylogenetics and Evolution. 2010, Jul; 56(1): 49-63.
  1. 7.   Identifying and characterizing recently transmitted viruses
  2. Keele, B. F.
  3. Current opinion in HIV and AIDS. 2010, Jul; 5(4): 327-34.
  1. 8.   Euprosterna elaeasa virus genome sequence and evolution of the Tetraviridae family: Emergence of bipartite genomes and conservation of the VPg signal with the dsRNA Birnaviridae family
  2. Zeddam, J. L.; Gordon, K. H. J.; Lauber, C.; Alves, C. A. F.; Luke, B. T.; Hanzlik, T. N.; Ward, V. K.; Gorbalenya, A. E.
  3. Virology. 2010, Feb; 397(1): 145-154.
  1. 9.   Comparative genomics in vertebrates: a role for the platypus. Introduction
  2. O'Brien, S. J.
  3. Reproduction, fertility, and development. 2009 21(8): vii-ix.
  1. 10.   RT-SHIV subpopulation dynamics in infected macaques during anti-HIV therapy
  2. Shao, W.; Kearney, M.; Maldarelli, F.; Mellors, J. W.; Stephens, R. M.; Lifson, J. D.; KewalRamani, V. N.; Ambrose, Z.; Coffin, J. M.; Palmer, S. E.
  3. Retrovirology. 2009 6: 101.
  1. 11.   Analyses of Sweet Receptor Gene (Tas1r2) and Preference for Sweet Stimuli in Species of Carnivora
  2. Li, X.; Glaser, D.; Li, W. H.; Johnson, W. E.; O'Brien, S. J.; Beauchamp, G. K.; Br, J. G.
  3. Journal of Heredity. 2009 100: S90-S100.
  1. 12.   HIV-1 recombination: an experimental assay and a phylogenetic approach
  2. Moore, M. D.; Chin, M. P.; Hu, W. S.
  3. Methods in molecular biology (Clifton, N.J.). 2009 485: 87-105.
  1. 13.   Genetic characterization of feline leukemia virus from Florida panthers
  2. Brown, M. A.; Cunningham, M. W.; Roca, A. L.; Troyer, J. L.; Johnson, W. E.; O'Brien, S. J.
  3. Emerging Infectious Diseases. 2008 14(2): 252-259.
  1. 14.   A family matter: Conclusive resolution of the taxonomic position of the long-fingered bats, Miniopterus
  2. Miller-Butterworth, C. M.; Murphy, W. J.; O'Brien, S. J.; Jacobs, D. S.; Springer, M. S.; Teeling, E. C.
  3. Molecular Biology and Evolution. 2007, Jul; 24(7): 1553-1561.
  1. 15.   The adequacy of morphology for reconstructing the early history of placental mammals
  2. Springer, M. S.; Burk-Herrick, A.; Meredith, R.; Eizirik, E.; Teeling, E.; O'Brien, S. J.; Murphy, W. J.
  3. Systematic Biology. 2007 56(4): 673-684.
  1. 16.   Phylogenomics of species from four genera of New World monkeys by flow sorting and reciprocal chromosome painting
  2. Dumas, F.; Stanyon, R.; Sineo, L.; Stone, G.; Bigoni, F.
  3. Bmc Evolutionary Biology. 2007 7
  1. 17.   Chromosome painting in the manatee supports Afrotheria and Paenungulata
  2. Kellogg, M. E.; Burkett, S.; Dennis, T. R.; Stone, G.; Gray, B. A.; McGuire, P. M.; Zori, R. T.; Stanyon, R.
  3. Bmc Evolutionary Biology. 2007, Jan; 7
  1. 18.   Multidirectional chromosome painting reveals a remarkable syntenic homology between the greater galagos and the slow loris
  2. Stanyon, R.; Dumas, F.; Stone, G.; Bigoni, F.
  3. American Journal of Primatology. 2006, Apr; 68(4): 349-359.
  1. 19.   Identification and characterization of potent small molecule inhibitor of hemorrhagic fever New World arenaviruses
  2. Bolken, T. C.; Laquerre, S.; Zhang, Y. M.; Bailey, T. R.; Pevear, D. C.; Kickner, S. S.; Sperzel, L. E.; Jones, K. F.; Warren, T. K.; Lund, S. A.; Kirkwood-Watts, D. L.; King, D. S.; Shurtleff, A. C.; Guttieri, M. C.; Deng, Y. J.; Bleam, M.; Hruby, D. E.
  3. Antiviral Research. 2006, Feb; 69(2): 86-97.
  1. 20.   The Late Miocene radiation of modern Felidae: A genetic assessment
  2. Johnson, W. E.; Eizirik, E.; Pecon-Slattery, J.; Murphy, W. J.; Antunes, A.; Teeling, E.; O'Brien, S. J.
  3. Science. 2006, JAN 6; 311(5757): 73-77.
  1. 21.   A molecular phylogeny for bats illuminates biogeography and the fossil record
  2. Teeling, E. C.; Springer, M. S.; Madsen, O.; Bates, P.; O'Brien, S. J.; Murphy, W. J.
  3. Science. 2005, JAN 28; 307(5709): 580-584.
  1. 22.   Mapping genomic rearrangements in titi monkeys by chromosome flow sorting and multidirectional in-situ hybridization
  2. Dumas, F.; Bigoni, F.; Stone, G.; Sineo, L.; Stanyon, R.
  3. Chromosome Research. 2005 13(1): 85-96.
  1. 23.   Evolution of the ATP-binding cassette (ABC) transporter superfamily in vertebrates
  2. Dean, M.; Annilo, T.
  3. Annual review of genomics and human genetics. 2005 6: 123-142.
  1. 24.   Reciprocal painting between humans, De Brazza's and patas monkeys reveals a major bifurcation in the Cercopithecini phylogenetic tree
  2. Stanyon, R.; Bruening, R.; Stone, G.; Shearin, A.; Bigoni, F.
  3. Cytogenetic and Genome Research. 2005 108(1-3): 175-182.
  1. 25.   Phylogenetic assessment of introns and SINEs within the Y chromosome using the cat family Felidae as a species tree
  2. Pecon-Slattery, J.; Wilkerson, A. J. P.; Murphy, W. J.; O'Brien, S. J.
  3. Molecular Biology and Evolution. 2004, DEC; 21(12): 2299-2309.
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