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  1. 1.   Characterization and tissue localization of zebrafish homologs of the human ABCB1 multidrug transporter
  2. Robey, Robert W.; Robinson, Andrea N.; Ali-Rahmani, Fatima; Huff, Lyn M.; Lusvarghi, Sabrina; Vahedi, Shahrooz; Hotz, Jordan M.; Warner,Andrew; Butcher,Donna; Matta,Jennifer; Edmondson,Elijah; Lee, Tobie D.; Roth, Jacob S.; Lee, Olivia W.; Shen, Min; Tanner, Kandice; Hall, Matthew D.; Ambudkar, Suresh; Gottesman, Michael M.
  3. SCIENTIFIC REPORTS. 2021, Dec 17; 11(1):
  1. 2.   RNF219 attenuates global mRNA decay through inhibition of CCR4-NOT complex-mediated deadenylation
  2. Poetz, Fabian; Corbo,Joshua; Levdansky,Yevgen; Spiegelhalter, Alexander; Lindner, Doris; Magg, Vera; Lebedeva, Svetlana; Schweiggert, Jorg; Schott, Johanna; Valkov,Eugene; Stoecklin, Georg
  3. Nature Communications. 2021, Dec 9; 12(1):
  1. 3.   The mechanism of Raf activation through dimerization
  2. Zhang,Mingzhen; Maloney,Ryan; Jang,Hyunbum; Nussinov,Ruth
  3. Chemical Science. 2021, Dec 08; 12(47): 15609-15619.
  1. 4.   Signaling in the crowded cell
  2. Nussinov,Ruth; Tsai,Chung-Jung; Jang,Hyunbum
  3. Current Opinion in Structural Biology. 2021, Dec; 71: 43-50.
  1. 5.   SARS-CoV-2: from its discovery to genome structure, transcription, and replication
  2. Castro Brant,Ayslan; Tian, Wei; Majerciak,Vladimir; Yang, Wei; Zheng,Zhi-Ming
  3. Cell & bioscience. 2021, Jul 19; 11(1):
  1. 6.   Arrow pushing in RNA modification sequencing
  2. Bartee,David; Thalalla Gamage,Supuni; Link,Courtney; Meier,Jordan
  3. Chemical Society reviews. 2021, Jul 14;
  1. 7.   B-Raf autoinhibition in the presence and absence of 14-3-3
  2. Zhang,Mingzhen; Jang,Hyunbum; Li, Zhigang; Sacks, David B.; Nussinov,Ruth
  3. Structure. 2021, Jul 1; 29(7): 768-777.e2.
  1. 8.   Inhibition of the DNA damage response phosphatase PPM1D reprograms neutrophils to enhance anti-tumor immune responses
  2. Uyanik, Burhan; Goloudina, Anastasia R.; Akbarali, Aamir; Grigorash, Bogdan B.; Petukhov, Alexey V.; Singhal, Sunil; Eruslanov, Evgeniy; Chaloyard, Jeanne; Lagorgette, Lisa; Hadi, Tarik; Baidyuk, Ekaterina V.; Sakai, Hiroyasu; Tessarollo,Lino; Ryffel, Bernhard; Mazur, Sharlyn J.; Lirussi, Frederic; Garrido, Carmen; Appella, Ettore; Demidov, Oleg N.
  3. NATURE COMMUNICATIONS. 2021, Jun 15; 12(1):
  1. 9.   The epigenetic regulator LSH maintains fork protection and genomic stability via MacroH2A deposition and RAD51 filament formation
  2. Xu,Xiaoping; Ni, Kai; He,Yafeng; Ren, Jianke; Sun, Chongkui; Liu, Yie; Aladjem, Mirit; Burkett, Sandra; Finney, Richard; Ding, Xia; Sharan,Shyam; Muegge,Kathrin
  3. Nature communications. 2021, Jun 10; 12(1):
  1. 10.   What Markov State Models Can and Cannot Do: Correlation versus Path-Based Observables in Protein-Folding Models
  2. Suarez Alvarez,Ernesto; Wiewiora, Rafal P.; Wehmeyer, Chris; Noe, Frank; Chodera, John D.; Zuckerman, Daniel M.
  3. Journal of chemical theory and computation. 2021, May 11; 17(5): 3119-3133.
  1. 11.   A stable immature lattice packages IP6 for HIV capsid maturation
  2. Mallery, Donna L.; Kleinpeter,Alex; Renner, Nadine; Faysal, K. M. Rifat; Novikova, Mariia; Kiss, Leo; Wilson, Miranda S. C.; Ahsan, Bilal; Ke, Zunlong; Briggs, John A. G.; Saiardi, Adolfo; Bocking, Till; Freed,Eric; James, Leo C.
  3. Science Advances. 2021, Mar 10; 7(11):
  1. 12.   A new precision medicine initiative at the dawn of exascale computing
  2. Nussinov,Ruth; Jang,Hyunbum; Nir, Guy; Tsai,Chung-Jung; Cheng, Feixiong
  3. Signal transduction and targeted therapy. 2021, Jan 6; 6(1):
  1. 13.   The NBDY Microprotein Regulates Cellular RNA Decapping
  2. Na, Zhenkun; Luo, Yang; Schofield, Jeremy A.; Smelyansky, Stephanie; Khitun, Alexandra; Muthukumar, Sowndarya; Valkov,Eugene; Simon, Matthew D.; Slavoff, Sarah A.
  3. BIOCHEMISTRY. 2020, OCT 27; 59(42): 4131-4142.
  1. 14.   An optimized protocol for retina single-cell RNA sequencing
  2. Fadl, Benjamin R.; Brodie,Seth; Malasky,Michael; Boland,Joseph; Kelly,Michael; Kelley, Matthew W.; Boger, Erich; Fariss, Robert; Swaroop, Anand; Campello, Laura
  3. MOLECULAR VISION. 2020, OCT 10; 26: 705-717.
  1. 15.   Structural Insights into the SPRED1-Neurofibromin-KRAS Complex and Disruption of SPRED1-Neurofibromin Interaction by Oncogenic EGFR
  2. Yan,Wupeng; Markegard, Evan; Dharmaiah, Srisathiyanarayanan; Urisman, Anatoly; Drew, Matthew; Esposito,Dom; Scheffzek, Klaus; Nissley,Dwight; McCormick, Frank; Simanshu,Dhirendra
  3. Cell reports. 2020, Jul 21; 32(3): 107909.
  1. 16.   HEM1 deficiency disrupts mTORC2 and F-actin control in inherited immunodysregulatory disease
  2. Cook, Sarah A; Comrie, William A; Poli, M Cecilia; Similuk, Morgan; Oler, Andrew J; Faruqi, Aiman J; Kuhns,Doug; Yang, Sheng; Vargas-Hernández, Alexander; Carisey, Alexandre F; Fournier, Benjamin; Anderson, D Eric; Price, Susan; Smelkinson, Margery; Abou Chahla, Wadih; Forbes, Lisa R; Mace, Emily M; Cao, Tram N; Coban-Akdemir, Zeynep H; Jhangiani, Shalini N; Muzny, Donna M; Gibbs, Richard A; Lupski, James R; Orange, Jordan S; Cuvelier, Geoffrey D E; Al Hassani, Moza; Al Kaabi, Nawal; Al Yafei, Zain; Jyonouchi, Soma; Raje, Nikita; Caldwell, Jason W; Huang, Yanping; Burkhardt, Janis K; Latour, Sylvain; Chen, Baoyu; ElGhazali, Gehad; Rao, V Koneti; Chinn, Ivan K; Lenardo, Michael J
  3. Science (New York, N.Y.). 2020, Jul 10; 369(6500): 202-207.
  1. 17.   A Systems Chemoproteomic Analysis of Acyl-CoA/Protein Interaction Networks
  2. Levy, Michaella J; Montgomery, David C; Sardiu, Mihaela E; Montano,Jose; Bergholtz, Sarah E; Nance,Kellie; Thorpe,Abbey; Fox,Stephen; Lin, Qishan; Andresson,Thorkell; Florens, Laurence; Washburn, Michael P; Meier,Jordan
  3. Cell chemical biology. 2020, MAR 19; 27(3): 322-+.
  1. 18.   The outcome of TGFß antagonism in metastatic breast cancer models in vivo reflects a complex balance between tumor-suppressive and pro-progression activities of TGFß
  2. Yang, Yuan; Yang, Howard; Tang, Binwu; Wu, Alex Man Lai; Flanders, Kathleen C; Moshkovich, Nellie; Weinberg, Douglas S; Welsh, Michael A; Weng, Jia; Ochoa, Humberto J; Hu, Tiffany Y; Herrmann, Michelle A; Chen, Jinqiu; Edmondson,Elijah; Simpson, R Mark; Liu, Fang; Liu, Huaitian; Lee, Maxwell; Wakefield, Lalage M
  3. Clinical cancer research : an official journal of the American Association for Cancer Research. 2020, FEB; 26(3): 643-656.
  1. 19.   Transcriptome-based molecular staging of human stem cell-derived retinal organoids uncovers accelerated photoreceptor differentiation by 9-cis retinal
  2. Kaya, Koray D.; Chen, Holly Y.; Brooks, Matthew J.; Kelley, Ryan A.; Shimada, Hiroko; Nagashima,Kunio; De Val Alda,Natalia; Drinnan, Charles T.; Gieser, Linn; Kruczek, Kamil; Erceg, Slaven; Li, Tiansen; Lukovic, Dunja; Adlakha, Yogita K.; Welby, Emily; Swaroop, Anand
  3. MOLECULAR VISION. 2019, Nov 11; 25: 663-678.
  1. 20.   Cryo-EM structure of the bacterial Ton motor subcomplex ExbB-ExbD provides information on structure and stoichiometry
  2. Celia, Herve; Botos, Istvan; Ni, Xiaodan; Fox,Tara; De Val Alda,Natalia; Lloubes, Roland; Jiang, Jiansen; Buchanan, Susan K
  3. Communications biology. 2019, OCT 4; 2(1): 358.
  1. 21.   KSHV RNA-binding protein ORF57 inhibits P-body formation to promote viral multiplication by interaction with Ago2 and GW182
  2. Sharma, Nishi R; Majerciak,Vladimir; Kruhlak, Michael J; Yu,Lulu; Kang, Jeong Gu; Yang,Acong; Gu,Shuo; Fritzler, Marvin J; Zheng,Zhi-Ming
  3. Nucleic acids research. 2019, SEP 26; 47(17): 9368-9385.
  1. 22.   Epigenetic regulation by endogenous metabolite pharmacology
  2. Kulkarni, Rhushikesh A.; Montgomery,David; Meier,Jordan
  3. Current opinion in chemical biology. 2019, Aug; 51: 30-39.
  1. 23.   The mechanism of RNA duplex recognition and unwinding by DEAD-box helicase DDX3X
  2. Song, He; Ji,Xinhua
  3. NATURE COMMUNICATIONS. 2019, Jul 12; 10(1):
  1. 24.   Single Chromosome Aneuploidy Induces Genome-Wide Perturbation of Nuclear Organization and Gene Expression
  2. Braun, Rudiger; Ronquist, Scott; Wangsa, Darawalee; Chen, Haiming; Anthuber, Lena; Gemoll, Timo; Wangsa, Danny; Koparde,Vishal; Hunn, Cynthia; Habermann, Jens K.; Heselmeyer-Haddad, Kerstin; Rajapakse, Indika; Ried, Thomas
  3. Neoplasia (New York, N.Y.). 2019, Apr; 21(4): 401-412.
  1. 25.   High-resolution characterization of centriole distal appendage morphology and dynamics by correlative STORM and electron microscopy
  2. Bowler, Mathew; Kong, Dong; Sun, Shufeng; Nanjundappa, Rashmi; Evans, Lauren; Farmer, Veronica; Holland, Andrew; Mahjoub, Moe R.; Sui, Haixin; Loncarek, Jadranka
  3. Nature communications. 2019, Mar 1; 10(1): 993.
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