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  1. 1.   Coordinate linkage of HIV evolution reveals regions of immunological vulnerability
  2. Dahirel, V.; Shekhar, K.; Pereyra, F.; Miura, T.; Artyomov, M.; Talsania, S.; Allen, T. M.; Altfeld, M.; Carrington, M.; Irvine, D. J.; Walker, B. D.; Chakraborty, A. K.
  3. Proceedings of the National Academy of Sciences of the United States of America. 2011, Jul; 108(28): 11530-11535.
  1. 2.   Profound early control of highly pathogenic SIV by an effector memory T-cell vaccine
  2. Hansen, S. G.; Ford, J. C.; Lewis, M. S.; Ventura, A. B.; Hughes, C. M.; Coyne-Johnson, L.; Whizin, N.; Oswald, K.; Shoemaker, R.; Swanson, T.; Legasse, A. W.; Chiuchiolo, M. J.; Parks, C. L.; Axthelm, M. K.; Nelson, J. A.; Jarvis, M. A.; Piatak, M.; Lifson, J. D.; Picker, L. J.
  3. Nature. 2011, May; 473(7348): 523-U270.
  1. 3.   Transmission of Single HIV-1 Genomes and Dynamics of Early Immune Escape Revealed by Ultra-Deep Sequencing
  2. Fischer, W.; Ganusov, V. V.; Giorgi, E. E.; Hraber, P. T.; Keele, B. F.; Leitner, T.; Han, C. S.; Gleasner, C. D.; Green, L.; Lo, C. C.; Nag, A.; Wallstrom, T. C.; Wang, S. Y.; McMichael, A. J.; Haynes, B. F.; Hahn, B. H.; Perelson, A. S.; Borrow, P.; Shaw, G. M.; Bhattacharya, T.; Korber, B. T.
  3. Plos One. 2010, Aug; 5(8): 15.
  1. 4.   Mosaic vaccines elicit CD8(+) T lymphocyte responses that confer enhanced immune coverage of diverse HIV strains in monkeys
  2. Santra, S.; Liao, H. X.; Zhang, R. J.; Muldoon, M.; Watson, S.; Fischer, W.; Theiler, J.; Szinger, J.; Balachandran, H.; Buzby, A.; Quinn, D.; Parks, R. J.; Tsao, C. Y.; Carville, A.; Mansfield, K. G.; Pavlakis, G. N.; Felber, B. K.; Haynes, B. F.; Korber, B. T.; Letvin, N. L.
  3. Nature Medicine. 2010, Mar; 16(3): 324-U122.
  1. 5.   Adenovirus type 5 with modified hexons induces robust transgene-specific immune responses in mice with pre-existing immunity against adenovirus type 5
  2. Abe, S.; Okuda, K.; Ura, T.; Kondo, A.; Yoshida, A.; Yoshizaki, S.; Mizuguchi, H.; Klinman, D.; Shimada, M.
  3. Journal of Gene Medicine. 2009 11(7): 570-579.
  1. 6.   Profound CD4(+)/CCR5(+) T cell expansion is induced by CD8(+) lymphocyte depletion but does not account for accelerated SIV pathogenesis
  2. Okoye, A.; Park, H.; Rohankhedkar, M.; Coyne-Johnson, L.; Lum, R.; Walker, J. M.; Planer, S. L.; Legasse, A. W.; Sylwester, A. W.; Piatak, M.; Lifson, J. D.; Sodora, D. L.; Villinger, F.; Axthelm, M. K.; Schmitz, J. E.; Picker, L. J.
  3. Journal of Experimental Medicine. 2009 206(7): 1575-1588.
  1. 7.   Effect of therapeutic immunization using Ad5/35 and MVA vectors on SIV infection of rhesus monkeys undergoing antiretroviral therapy
  2. Shimada, M.; Wang, H. B.; Kondo, A.; Xu, X. P.; Yoshida, A.; Shinoda, K.; Ura, T.; Mizuguchi, H.; Klinman, D.; Luo, J. L.; Bai, H.
  3. Gene Therapy. 2009 16(2): 218-228.
  1. 8.   Protective HLA Class I Alleles That Restrict Acute-Phase CD8(+) T-Cell Responses Are Associated with Viral Escape Mutations Located in Highly Conserved Regions of Human Immunodeficiency Virus Type 1
  2. Wang, Y.; Li, B.; Carlson, J. M.; Streeck, H.; Gladden, A. D.; Goodman, R.; Schneidewind, A.; Power, K. A.; Toth, I.; Frahm, N.; Alter, G.; Brander, C.; Carrington, M.; Walker, B. D.; Altfeld, M.; Heckerman, D.; Allen, T. M.
  3. Journal of Virology. 2009 83(4): 1845-1855.
  1. 9.   Vaccine-Induced Cellular Responses Control Simian Immunodeficiency Virus Replication after Heterologous Challenge
  2. Wilson, N. A.; Keele, B. F.; Reed, J. S.; Piaskowski, S. M.; MacNair, C. E.; Bett, A. J.; Liang, X. P.; Wang, F. B.; Thoryk, E.; Heidecker, G. J.; Citron, M. P.; Huang, L. Y.; Lin, J.; Vitelli, S.; Ahn, C. D.; Kaizu, M.; Maness, N. J.; Reynolds, M. R.
  3. Journal of Virology. 2009 83(13): 6508-6521.
  1. 10.   The Mamu B*17-restricted SIV NefIW9 to TW9 mutation abrogates correct epitope processing and presentation without loss of replicative fitness
  2. Minang, J. T.; Trivett, M. T.; Coren, L. V.; Barsov, E. V.; Piatak, M.; Chertov, O.; Chertova, E.; Ott, D. E.; Ohlen, C.
  3. Virology. 2008 375(1): 307-314.
  1. 11.   Potent antibody-mediated neutralization and evolution of antigenic escape variants of simian immunodeficiency virus strain SIVmac239 in vivo
  2. Sato, S.; Yuste, E.; Lauer, W. A.; Chang, E. H.; Morgan, J. S.; Bixby, J. G.; Lifson, J. D.; Desrosiers, R. C.; Johnson, W. E.
  3. Journal of Virology. 2008 82(19): 9739-9752.
  1. 12.   CD4(+) T-cell loss and delayed expression of modulators of immune responses at mucosal sites of vaccinated macaques following SIVmac251 infection
  2. Vaccari, M.; Boasso, A.; Ma, Z. M.; Cecchinato, V.; Venzon, D.; Doster, M. N.; Tsai, W. P.; Shearer, G. M.; Fuchs, D.; Felber, B. K.; Pavlakis, G. N.; Miller, C. J.; Franchini, G.
  3. Mucosal Immunology. 2008 1(6): 497-507 DI 10.1038/mi.20.
  1. 13.   Longitudinal in vivo positron emission tomography imaging of infected and activated brain macrophages in a macaque model of human immunodeficiency virus encephalitis correlates with central and peripheral markers of encephalitis and areas of synaptic
  2. Venneti, S.; Bonneh-Barkay, D.; Lopresti, B. J.; Bissel, S. J.; Wang, G.; Mathis, C. A.; Piatak, M.; Lifson, J. D.; Nyaundi, J. O.; Murphey-Corb, M.; Wiley, C. A.
  3. American Journal of Pathology. 2008 172(6): 1603-1616.
  1. 14.   Human immunodeficiency virus type 1 derivative with 7% simian immunodeficiency virus genetic content is able to establish infections in pig-tailed macaques
  2. Igarashi, T.; Iyengar, R.; Byrum, R. A.; Buckler-White, A.; Dewar, R. L.; Buckler, C. E.; Lane, H. C.; Kamada, K.; Adachi, A.; Martin, M. A.
  3. Journal of Virology. 2007, Oct; 81(20): 11549-11552.
  1. 15.   Recombinant modified vaccinia virus Ankara provides durable protection against disease caused by an immunodeficiency virus as well as long-term immunity to an orthopoxvirus in a non-human primate
  2. Earl, P. L.; Americo, J. L.; Wyatt, L. S.; Eller, L. A.; Montefiori, D. C.; Byrum, R.; Piatak, M.; Lifson, J. D.; Amara, R. R.; Robinson, H. L.; Huggins, J. W.; Moss, B.
  3. Virology. 2007, Sep; 366(1): 84-97.
  1. 16.   Macaques co-immunized with SIVgag/pol-HIVenv and IL-12 plasmid have increased cellular responses
  2. Robinson, T. M.; Sidhui, M. K.; Pavlakis, G. N.; Felber, B. K.; Silvera, P.; Lewis, M. G.; Eldridge, J.; Weiner, D. B.; Boyer, J. D.
  3. Journal of Medical Primatology. 2007, Aug; 36(4-5): 276-284.
  1. 17.   Loss of naive cells accompanies memory CD4(+) T-cell depletion during long-term progression to AIDS in simian immunodeficiency virus-infected macaques
  2. Nishimura, Y.; Igarashi, T.; Buckler-White, A.; Buckler, C.; Imamichi, H.; Goeken, R. M.; Lee, W. R.; Lafont, B. A. P.; Byrum, R.; Lane, H. C.; Hirsch, V. M.; Martin, M. A.
  3. Journal of Virology. 2007, Jan; 81(2): 893-902.
  1. 18.   Macaque multimeric soluble CD40 ligand and GITR ligand constructs are immunostimulatory molecules in vitro
  2. Stone, G. W.; Barzee, S.; Snarsky, V.; Spina, C. A.; Lifson, J. D.; Pillai, V. K. B.; Amara, R. R.; Villinger, F.; Kornbluth, R. S.
  3. Clinical and Vaccine Immunology. 2006, Nov; 13(11): 1223-1230.
  1. 19.   DNA vaccines expressing different forms of simian immunodeficiency virus antigens decrease viremia upon SIVmac251 challenge
  2. Rosati, M.; von Gegerfelt, A.; Roth, P.; Alicea, C.; Valentin, A.; Robert-Guroff, M.; Venzon, D.; Montefiori, D. C.; Markham, P.; Felber, B. K.; Pavlakis, G. N.
  3. Journal of Virology. 2005, JUL; 79(13): 8480-8492.
  1. 20.   Immunization of macaques with single-cycle simian immunodeficiency virus (SIV) stimulates diverse virus-specific immune responses and reduces viral loads after challenge with SIV(mac)239
  2. Evans, D. T.; Bricker, J. E.; Sanford, H. B.; Lang, S.; Carville, A.; Richardson, B. A.; Piatak, M.; Lifson, J. D.; Mansfield, K. G.; Desrosiers, R. C.
  3. Journal of Virology. 2005, JUN; 79(12): 7707-7720.
  1. 21.   Single haplotype analysis demonstrates rapid evolution of the killer immunoglobulin-like receptor (KIR) loci in primates
  2. Sambrook, J. G.; Bashirova, A.; Palmer, S.; Sims, S.; Trowsdale, J.; bi-Rached, L.; Parham, P.; Carrington, M.; Beck, S.
  3. Genome Research. 2005, JAN; 15(1): 25-35.
  1. 22.   Impact of nef-mediated downregulation of major histocompatibility complex class I on immune response to simian immunodeficiency virus
  2. Swigut, T.; Alexander, L.; Morgan, J.; Lifson, J.; Mansfield, K. G.; Lang, S.; Johnson, R. P.; Skowronski, J.; Desrosiers, R.
  3. Journal of Virology. 2004, DEC; 78(23): 13335-13344.
  1. 23.   Macaque dendritic cells infected with SIV-recombinant canarypox ex vivo induce SIV-specific immune responses in vivo
  2. Villamide-Herrera, L.; Ignatius, R.; Eller, M. A.; Wilkinson, K.; Griffin, C.; Mehlhop, E.; Jones, J.; Han, S. Y.; Lewis, M. G.; Parrish, S.; Vancott, T. C.; Lifson, J. D.; Schlesinger, S.; Mascola, J. R.; Pope, M.
  3. Aids Research and Human Retroviruses. 2004, AUG; 20(8): 871-884.
  1. 24.   Cyanovirin-N inhibits AIDS virus infections in vaginal transmission models
  2. Tsai, C. C.; Emau, P.; Jiang, Y. H.; Agy, M. B.; Shattock, R. J.; Schmidt, A.; Morton, W. R.; Gustafson, K. R.; Boyd, M. R.
  3. Aids Research and Human Retroviruses. 2004 20(1): 11-18.
  1. 25.   A simian replication-defective vaccine to HIV-1 gag
  2. Fitzgerald, J. C.; Gao, G. P.; Reyes-Sandoval, A.; Pavlakis, G. N.; Xiang, Z. Q.; Wlazlo, A. P.; Giles-Davis, W.; Wilson, J. M.; Ertl, H. C. J.
  3. Journal of Immunology. 2003 170(3): 1416-1422.
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