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  1. 1.   Molecular and genetic characterization of sex-linked orange coat color in the domestic cat
  2. Kaelin, Christopher B; McGowan, Kelly A; Trotman, Joshaya C; Koroma, Donald C; David, Victor A; Menotti-Raymond, Marilyn; Graff, Emily C; Schmidt-Küntzel, Anne; Oancea, Elena; Barsh, Gregory S
  3. Current Biology : CB. 2025, May 12;
  1. 2.   How to recover from a bad start: adaptation of HIV-1 transcription start site mutants during serial passaging in culture
  2. Nikolaitchik,Olga; Chameettachal,Akhil; Islam,Mohammad Saiful; Keele,Brandon; Delviks-Frankenberry, Krista; Pathak,Vinay; Hu,Wei-Shau; Cheng,Zetao
  3. Journal of Virology. 2025, May 07; e0015925.
  1. 3.   Machine learning-augmented molecular dynamics simulations (MD) reveal insights into the disconnect between affinity and activation of ZTP riboswitch ligands
  2. Fullenkamp, Christopher; Mehdi, Shams; Jones, Christopher; Tenney, Logan; Pichling, Patricio; Prestwood, Peri R; Ferré-D'Amaré, Adrian R; Tiwary, Pratyush; Schneekloth,John
  3. Angewandte Chemie (International ed. in English). 2025, May 01; e202505971.
  1. 4.   Development of patient reported outcome measures assessing tumor pain intensity and tumor pain interference for individuals with neurofibromatosis type 1 and plexiform neurofibromas: qualitative findings
  2. Al Ghriwati, Nour; Struemph, Kari; Martin, Staci; Little, Paige; Baker, Melissa; Levine, Jason; MacKenzie, Cynthia; Tonsgard, James; Schorry, Elizabeth K; Walsh, Karin S; Wolters, Pamela L
  3. Journal of Patient-Reported Outcomes. 2025, Apr 30; 9(1): 46.
  1. 5.   A monomeric envelope glycoprotein cytoplasmic tail is sufficient for HIV-1 Gag lattice trapping and incorporation
  2. Groves, Nicholas S; Clark, Austin R; Aguilar, Rebekah S; Hikichi,Yuta; Kostenko, Anastasiia; Bruns, Merissa M; Aron, Alegra T; Freed,Eric; van Engelenburg, Schuyler B
  3. Journal of virology. 2025, Apr 15; e0210524.
  1. 6.   Nanoparticles may influence mast cells gene expression profiles without affecting their degranulation function
  2. Newton,Hannah; Cedrone,Edward; Grunberger, Jason; Xie,Shaojun; Zhao,Yongmei; Tran,Bao; Toms, Bradley; Xu, Weining; Plant-Hately, Alexander; Liptrott, Neill J; Dobrovolskaia,Marina
  3. Nanomedicine : nanotechnology, biology, and medicine. 2025, Apr 02; 102818.
  1. 7.   The human oral microbiome and risk of colorectal cancer within three prospective cohort studies in the United States
  2. Vogtmann, Emily; Yano, Yukiko; Zouiouich, Semi; Hua,Xing; Wan, Yunhu; Purandare, Vaishnavi; Li, Shilan; Dagnall,Casey; Jones, Kristine; Hicks,Belynda; Hutchinson,Amy; Caporaso, J Gregory; Wheeler, William; Huang, Wen-Yi; Freedman, Neal D; Sandler, Dale P; Beane Freeman, Laura E; Liao, Linda M; Gail, Mitchell H; Shi, Jianxin; Abnet, Christian C; Sinha, Rashmi
  3. Cancer. 2025, Mar 15; 131(6): e35802.
  1. 8.   Data imbalance in drug response prediction: multi-objective optimization approach in deep learning setting
  2. Narykov, Oleksandr; Zhu, Yitan; Brettin, Thomas; Evrard,Yvonne; Partin, Alexander; Xia, Fangfang; Shukla, Maulik; Vasanthakumari, Priyanka; Doroshow, James H; Stevens, Rick L
  3. Briefings in Bioinformatics. 2025, Mar 04; 26(2):
  1. 9.   Prior SARS-Cov-2 infection affects adaptive immune responses to Omicron BA.4/BA.5 mRNA booster
  2. Wachter, Brianna T; Xu, Qin; Shi, Lihong; Burbelo, Peter D; Myint-Hpu, Kathy; Schwartzberg, Pamela L; Rehman,Tauseef; Dewar,Robin; Boswell, Kristin L; Koup, Richard A; Oguz, Cihan; Imberti, Luisa; Bellusci, Lorenza; Pourhashemi, Sara; Khurana, Surender; Manthiram, Kalpana; Notarangelo, Luigi D; Delmonte, Ottavia M
  3. The journal of Allergy and Clinical Immunology. . 2025, Mar 03;
  1. 10.   A robust fluorogenic substrate for chikungunya virus protease (nsP2) activity
  2. Makhaik, Sparsh; Rut, Wioletta; Choudhary, Shruti; Upadhyay, Tulsi; Hao, Chenzhou; Westberg, Michael; Bobst, Cedric; Yoo,Euna; Fejzo, Jasna; Lin, Michael Z; Bogyo, Matthew; Thompson, Paul; Drag, Marcin; Hardy, Jeanne A
  3. Protein Science : a publication of the Protein Society. 2025, Mar; 34(3): e70069.
  1. 11.   Early influenza virus exposure shapes the B cell response to influenza vaccination in individuals 50 years later
  2. Spangler, Abby; Shimberg, Geoffrey D; Mantus, Grace E; Malek, Rory; Cominsky, Lauren Y; Tsybovsky,Yaroslav; Li,Ning; Gillespie, Rebecca A; Ravichandran, Michelle; Creanga, Adrian; Raab, Julie E; Gajjala, Suprabhath R; Mendoza, Floreliz; Houser, Katherine V; Dropulic, Lesia; McDermott, Adrian B; Kanekiyo, Masaru; Andrews, Sarah F
  3. Immunity. 2025, Feb 25;
  1. 12.   TRa1 mutant suppresses KLF9 to cause endometrial metaplasia with ectopic IL-33 expression leading to uterine fibrosis and infertility
  2. Edmondson,Elijah; Kimura, Takahito; Hwang, Eunmi; Kim, Minjun; Warner,Andrew; Zhu, Yuelin; Zhao, Li; Yu, Yanlin; Zhu, Xuguang; Hernandez, Maria; Kedei, Noemi; Cheng, Sheue-Yann
  3. Scientific Reports. 2025, Jan 31; 15(1): 3892.
  1. 13.   Use of mobile phones to collect data on COVID-19: phone access and participation rates, in Rakai, Uganda
  2. Ssekubugu, Robert; Ndyanabo, Anthony; Makumbi, Fredrick; Ekström, Anna Mia; Beres, Laura; Nalwoga Kigozi, Grace; Nakawooya, Hadijja; Ssekasanvu, Joseph; Wawer, Maria J; Nalugoda, Fred; Sewankambo, Nelson; Ssempijja,Victor; Nantume, Betty; Serwadda, David; Kigozi, Godfrey; Gray, Ronald H; Chang, Larry W; Grabowski, M Kate; Nordenstedt, Helena; Kagaayi, Joseph
  3. Global Health Action. 2024, Dec 31; 17(1): 2419160.
  1. 14.   SNARE mimicry by the CD225 domain of IFITM3 enables regulation of homotypic late endosome fusion
  2. Rahman, Kazi; Wilt,Isaiah; Jolley, Abigail A; Chowdhury,Bhabadeb; Datta, Siddhartha A K; Compton,Alex
  3. The EMBO Journal. 2024, Dec 09;
  1. 15.   Aberrant Wnt/ß-catenin signaling in the mesenchymal stem cells of LZTFL1-depleted mice leads to increased adipogenesis, with implications for obesity
  2. Badralmaa,Yunden; Natarajan,Ven
  3. The Journal of Biological Chemistry. 2024, Dec 09; 108057.
  1. 16.   Association of changes in expression of HDAC and SIRT genes after drug treatment with cancer cell line sensitivity to kinase inhibitors
  2. Krushkal, Julia; Zhao, Yingdong; Roney, Kyle; Zhu, Weimin; Brooks,Alan; Wilsker,Deborah; Parchment, Ralph E; McShane, Lisa M; Doroshow, James H
  3. Epigenetics. 2024, Dec; 19(1): 2309824.
  1. 17.   Modulating the immunodominance hierarchy of immunoglobulin germline-encoded structural motifs targeting the influenza hemagglutinin stem
  2. Ataca, Sila; Sangesland, Maya; de Paiva Fróes Rocha, Rebeca; Torrents de la Peña, Alba; Ronsard, Larance; Boyoglu-Barnum, Seyhan; Gillespie, Rebecca A; Tsybovsky,Yaroslav; Stephens,Tyler; Moin, Syed M; Lederhofer, Julia; Creanga, Adrian; Andrews, Sarah F; Barnes, Ralston M; Rohrer, Daniel; Lonberg, Nils; Graham, Barney S; Ward, Andrew B; Lingwood, Daniel; Kanekiyo, Masaru
  3. Cell Reports. 2024, Nov 22; 43(12): 114990.
  1. 18.   Associations Between Mosaic Loss of Sex Chromosomes and Incident Hospitalization for Atrial Fibrillation in the United Kingdom
  2. Lim, Jungeun; Hubbard, Aubrey K; Blechter, Batel; Shi, Jianxin; Zhou,Weiyin; Loftfield, Erikka; Machiela, Mitchell J; Wong, Jason Y Y
  3. Journal of the American Heart Association. 2024, Nov 19; 13(22): e036984.
  1. 19.   Extracellular Matrix Limits Nanoparticle Diffusion and Cellular Uptake in a Tissue-Specific Manner
  2. Cahn,Devorah; Stern, Alexa; Buckenmeyer,Michael; Wolf,Matthew; Duncan, Gregg A
  3. ACS Nano. 2024, Nov 05;
  1. 20.   Role of physicochemical properties in silica nanoparticle-mediated immunostimulation
  2. Grunberger, Jason William; Newton,Hannah; Donohue,Duncan; Dobrovolskaia,Marina; Ghandehari, Hamidreza
  3. Nanotoxicology. 2024, Oct 26; 1-19.
  1. 21.   Practical application of good participatory practices for trials of emerging pathogens: Developing materials for use in ACTIV-3, -3b, and ACTIV-associated COVID-19 trials
  2. Guerra-de-Blas, Paola Del Carmen; Marines-Price, Rubria; Milman, Olga; Deal,Danae; Marchand,Jon; Linton,Jessica; Meger, Sue; Rule, John; Holland, Thomas L; Kitonsa, Jonathan; Delph, Yvette
  3. Journal of Clinical and Translational Science. 2024, Oct 15; 8(1): e157.
  1. 22.   ERK signaling promotes resistance to TRK kinase inhibition in NTRK fusion-driven glioma mouse models
  2. Schmid, Sebastian; Russell, Zachary R; Shimura Yamashita,Alex; West, Madeline E; Parrish, Abigail G; Walker, Julia; Rudoy, Dmytro; Yan, James Z; Quist, David C; Gessesse, Betemariyam N; Alvinez, Neriah; Hill, Kimberly D; Anderson,Larry; Cimino, Patrick J; Kumasaka, Debra K; Parchment,Ralph; Holland, Eric C; Szulzewsky, Frank
  3. Cell Reports. 2024, Oct 03; 43(10): 114829.
  1. 23.   Factors affecting Kaposi's sarcoma-associated herpesvirus transmission in rural Ugandan households, a longitudinal study
  2. Sabourin, Katherine R; Marshall, Vickie A; Eaton, Will; Kimono, Beatrice; Mugisha, Joseph; Miley, Wendell J; Labo, Nazzarena; Samayoa-Reyes, Gabriela; Whitby, Denise; Rochford, Rosemary; Newton, Robert
  3. Infectious Agents and Cancer. 2024, Oct 03; 19(1): 49.
  1. 24.   Chlorophyll Derivatives Exert Greater Potency Over Progesterone in the Prevention of Infection-Induced Preterm Birth in Murine Models
  2. Uchendu, Adaeze P; Omogbai, Eric K; Obarisiagbon, Philip A; Omogiade, Uyi G; Bafor,Enitome
  3. American Journal of Reproductive Immunology (New York, N.Y. : 1989). 2024, Oct; 92(4): e70000.
  1. 25.   Translation of HIV-1 unspliced RNA is regulated by 5' untranslated region structure
  2. Cheng,Zetao; Islam,Mohammad Saiful; Kanlong, Joseph G; Sheppard, Madeline; Seo, Heewon; Nikolaitchik,Olga; Kearse, Michael G; Pathak,Vinay; Musier-Forsyth, Karin; Hu,Wei-Shau
  3. Journal of Virology. 2024, Sep 24; e0116024.
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