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  1. 1.   How to recover from a bad start: adaptation of HIV-1 transcription start site mutants during serial passaging in culture
  2. Nikolaitchik,Olga; Chameettachal,Akhil; Islam,Mohammad Saiful; Keele,Brandon; Delviks-Frankenberry, Krista; Pathak,Vinay; Hu,Wei-Shau; Cheng,Zetao
  3. Journal of Virology. 2025, May 07; e0015925.
  1. 2.   Kaposi Sarcoma-Associated Herpesvirus Risk and Disease in Kidney Donors and Transplant Recipients with HIV in the United States
  2. Nambiar, Puja; Liang, Tao; Labo,Maria Nazzarena; Hand, Jonathan; Blumberg, Emily A; Rana, Meenakshi M; Florman, Sander; Haydel, Brandy; Morris, Michele I; Schaenman, Joanna; Rodrigues, Moreno M S; Werbel, William A; Bowring, Mary G; Friedman-Moraco, Rachel J; Stock, Peter; Stosor, Valentina; Mehta, Shikha; Gilbert, Alexander J; Elias, Nahel; Mehta, Sapna A; Small, Catherine B; Haidar, Ghady; Malinis, Maricar; Pereira, Marcus R; Aslam, Saima; Wojciechowski, David; La Hoz, Ricardo; Santos, Carlos A Q; Apewokin, Senu; Castillo-Lugo, Jose A; Ranganna, Karthik; Morsheimer, Megan; Massie, Allan; Segev, Dorry L; Miley,Wendell; Marshall,Vickie; Whitby,Denise; Tobian, Aaron A A; Durand, Christine M
  3. Clinical Infectious Diseases : an official publication of the Infectious Diseases Society of America. 2025, May 05;
  1. 3.   Effects of high-fiber, high-fruit and high-vegetable, low-fat dietary intervention on the rectal tissue microbiome
  2. Byrd, Doratha A; Gomez, Maria; Hogue, Stephanie; Wan, Yunhu; Ortega-Villa, Ana; Warner,Andrew; Dagnall,Casey; Jones,Kristine; Hicks,Belynda; Albert, Paul; Murphy, Gwen; Sinha, Rashmi; Vogtmann, Emily
  3. Journal of the National Cancer Institute. 2025, Feb 18;
  1. 4.   Genomic insights for personalised care in lung cancer and smoking cessation: motivating at-risk individuals toward evidence-based health practices
  2. Chen, Tony; Pham, Giang; Fox, Louis; Adler, Nina; Wang,Kevin; Zhang, Jingning; Byun, Jinyoung; Han, Younghun; Saunders, Gretchen R B; Liu, Dajiang; Bray, Michael J; Ramsey, Alex T; McKay, James; Bierut, Laura J; Amos, Christopher I; Hung, Rayjean J; Lin, Xihong; Zhang, Haoyu; Chen, Li-Shiun
  3. EBioMedicine. 2024, Nov 08; 110: 105441.
  1. 5.   SARS-CoV-2 seroprevalence in vaccine-naïve participants from the Democratic Republic of Congo, Guinea, Liberia, and Mali
  2. Sylvain, Laverdure; Donatien, Kazadi; Kadidia, Kone; Viviane, Callier; Djeneba, Dabitao; Dehkontee, Dennis; Cherif, Haidara Mory; Sally, Hunsberger; Tshiani Mbaya,Olivier; Renee, Ridzon; Irini, Sereti; Katy, Shaw-Saliba
  3. International Journal of Infectious Diseases : IJID : official publication of the International Society for Infectious Diseases. 2024, Feb 26; 106985.
  1. 6.   Prevalence, Incidence, and Predictors of Kaposi Sarcoma-associated Herpesvirus Infection Among Young Men Who Have Sex with Men in the Southern United States
  2. Salyards, Maverick; Nijhawan, Ank E; Kuo, Jacky; Knights, Sheena M; Lazarte, Susana; Labo,Nazzarena; Miley,Wendell; Whitby,Denise; Hwang, Lu-Yu; Kornberg, Anna-William; Fujimoto, Kayo; Chiao, Elizabeth Y
  3. The Journal of Infectious Diseases. 2023, Sep 15;
  1. 7.   Differential sensitivity of the yeast Lon protease Pim1p to impaired mitochondrial respiration
  2. Metzger,Meredith; Scales, Jessica L; Grant, Garis A; Molnar,Abby; Loncarek,Jadranka; Weissman,Allan
  3. The Journal of Biological Chemistry. 2023, Aug; 299(8): 104937.
  1. 8.   Concordance of SARS-CoV-2 Antibody Results during a Period of Low Prevalence
  2. Miller, Cheryl N; Althoff, Keri N; Schlueter, David J; Anton-Culver, Hoda; Chen, Qingxia; Garbett, Shawn; Ratsimbazafy, Francis; Thomsen, Isaac; Karlson, Elizabeth W; Cicek, Mine; Pinto,Ligia; Malin, Bradley A; Ohno-Machado, Lucila; Williams, Carolyn; Goldstein, David; Kouame, Aymone; Ramirez, Andrea; Gebo, Kelly A; Schully, Sheri D
  3. mSphere. 2022, Sep 29; e0025722.
  1. 9.   Scaffolding viral protein NC nucleates phase separation of the HIV-1 biomolecular condensate
  2. Monette, Anne; Niu, Meijuan; Nijhoff Asser, Maya; Gorelick,Robert; Mouland, Andrew J
  3. Cell Reports. 2022, Aug 23; 40(8): 111251.
  1. 10.   Relative domain orientation of the L289K HIV-1 reverse transcriptase monomer
  2. Xi, Zhaoyong; Ilina, Tatiana V; Guerrero, Michel; Fan,Lixin; Sluis-Cremer, Nicolas; Wang,Yun-Xing; Ishima, Rieko
  3. Protein Science : a publication of the Protein Society. 2022, May; 31(5): e4307.
  1. 11.   Exploration of Ultralarge Compound Collections for Drug Discovery
  2. Warr, Wendy A; Nicklaus,Marc; Nicolaou, Christos A; Rarey, Matthias
  3. Journal of Chemical Information and Modeling. 2022, Apr 14;
  1. 12.   APOL1 Renal Risk Variants and Sickle Cell Trait Associations With Reduced Kidney Function in a Large Congolese Population-Based Study
  2. Masimango, Mannix Imani; Jadoul, Michel; Binns-Roemer,Elizabeth; David,Victor; Sumaili, Ernest Kiswaya; Winkler,Cheryl; Limou, Sophie
  3. Kidney International Reports. 2022, Mar; 7(3): 474-482.
  1. 13.   Characterization and tissue localization of zebrafish homologs of the human ABCB1 multidrug transporter
  2. Robey, Robert W.; Robinson, Andrea N.; Ali-Rahmani, Fatima; Huff, Lyn M.; Lusvarghi, Sabrina; Vahedi, Shahrooz; Hotz, Jordan M.; Warner,Andrew; Butcher,Donna; Matta,Jennifer; Edmondson,Elijah; Lee, Tobie D.; Roth, Jacob S.; Lee, Olivia W.; Shen, Min; Tanner, Kandice; Hall, Matthew D.; Ambudkar, Suresh; Gottesman, Michael M.
  3. SCIENTIFIC REPORTS. 2021, Dec 17; 11(1):
  1. 14.   RNF219 attenuates global mRNA decay through inhibition of CCR4-NOT complex-mediated deadenylation
  2. Poetz, Fabian; Corbo,Joshua; Levdansky,Yevgen; Spiegelhalter, Alexander; Lindner, Doris; Magg, Vera; Lebedeva, Svetlana; Schweiggert, Jorg; Schott, Johanna; Valkov,Eugene; Stoecklin, Georg
  3. Nature Communications. 2021, Dec 9; 12(1):
  1. 15.   The mechanism of Raf activation through dimerization
  2. Zhang,Mingzhen; Maloney,Ryan; Jang,Hyunbum; Nussinov,Ruth
  3. Chemical Science. 2021, Dec 08; 12(47): 15609-15619.
  1. 16.   Signaling in the crowded cell
  2. Nussinov,Ruth; Tsai,Chung-Jung; Jang,Hyunbum
  3. Current Opinion in Structural Biology. 2021, Dec; 71: 43-50.
  1. 17.   ATR inhibition reverses the resistance of homologous recombination deficient MGMTlow/MMRproficient cancer cells to temozolomide
  2. El Touny,Lara; Hose,Curtis; Connelly,John; Harris, Erik; Monks, Anne; Dull,Angie; Wilsker,Deborah; Hollingshead,Melinda; Gottholm-Ahalt, Michelle; Alcoser,Sergio; Mullendore,Michael; Parchment,Ralph; Doroshow, James H; Teicher, Beverly A; Rapisarda,Annamaria
  3. Oncotarget. 2021, Oct 12; 12(21): 2114-2130.
  1. 18.   Recurrent Frameshift Neoantigen Vaccine Elicits Protective Immunity With Reduced Tumor Burden and Improved Overall Survival in a Lynch Syndrome Mouse Model
  2. Gebert, J; Gelincik, O; Oezcan-Wahlbrink, M; Marshall,Jason; Hernandez-Sanchez, A; Urban, K; Long, M; Cortes, E; Tosti, E; Katzenmaier, E M; Song,Yurong; Elsaadi, A; Deng, N; Vilar, E; Fuchs, V; Nelius, N; Yuan,; Ahadova, A; Sei, S; Shoemaker, R H; Umar, A; Wei, L; Liu, S; Bork, P; Edelmann, W; von Knebel Doeberitz, M; Lipkin, S M; Kloor, M
  3. Gastroenterology. 2021, Oct; 161(4): 1288-1302.e13.
  1. 19.   Stable Latent HIV Infection and Low-Level Viremia Despite Treatment with the Broadly Neutralizing Antibody VRC07-523LS and the Latency Reversal Agent Vorinostat
  2. Gay, C L; James, K S; Tuyishime, M; Falcinelli, S D; Joseph, S B; Moeser, M J; Allard, B; Kirchherr, J L; Clohosey, M; Raines, S L M; Montefiori, D C; Shen, X; Gorelick,Robert; Gama, L; McDermott, A B; Koup, R A; Mascola, J R; Floris-Moore, M; Kuruc, J D; Ferrari, G; Eron, J J; Archin, N M; Margolis, D M
  3. The Journal of Infectious Diseases. 2021, Sep 25;
  1. 20.   Prevalence and risk of residual viremia after ART in low- and middle-income countries A cross-sectional study
  2. Gatechompol, Sivaporn; Zheng, Lu; Bao, Yajing; Avihingsanon, Anchalee; Kerr, Stephen J.; Kumarasamy, Nagalingeswaran; Hakim, James G.; Maldarelli,Frank; Gorelick,Robert; Welker,Jorden; Lifson,Jeffrey; Hosseinipour, Mina C.; Eron, Joseph J.; Ruxrungtham, Kiat
  3. Medicine (Baltimore). 2021, Sep 3; 100(35):
  1. 21.   In-utero exposure to zidovudine-containing antiretroviral therapy and clonal hematopoiesis in HIV-exposed uninfected newborns
  2. Lin, Shu-Hong; Wang, Youjin; Hartley, Stephen W.; Karyadi, Danielle M.; Lee, Olivia W.; Zhu, Bin; Zhou,Weiyin; Brown, Derek W.; Beilstein-Wedel, Erin; Hazra, Rohan; Kacanek, Deborah; Chadwick, Ellen G.; Marsit, Carmen J.; Poirier, Miriam C.; Brummel, Sean S.; Chanock, Stephen J.; Engels, Eric A.; Machiela, Mitchell J.
  3. AIDS. 2021, Aug 1; 35(10): 1525-1535.
  1. 22.   Crystal Structure of a Retroviral Polyprotein: Prototype Foamy Virus Protease-Reverse Transcriptase (PR-RT)
  2. Harrison, Jerry Joe E K; Tuske, Steve; Das, Kalyan; Ruiz, Francesc X; Bauman, Joseph D; Boyer,Paul; DeStefano, Jeffrey J; Hughes,Stephen; Arnold, Eddy
  3. Viruses. 2021, Aug; 13(8):
  1. 23.   SARS-CoV-2: from its discovery to genome structure, transcription, and replication
  2. Castro Brant,Ayslan; Tian, Wei; Majerciak,Vladimir; Yang, Wei; Zheng,Zhi-Ming
  3. Cell & bioscience. 2021, Jul 19; 11(1):
  1. 24.   Arrow pushing in RNA modification sequencing
  2. Bartee,David; Thalalla Gamage,Supuni; Link,Courtney; Meier,Jordan
  3. Chemical Society reviews. 2021, Jul 14;
  1. 25.   B-Raf autoinhibition in the presence and absence of 14-3-3
  2. Zhang,Mingzhen; Jang,Hyunbum; Li, Zhigang; Sacks, David B.; Nussinov,Ruth
  3. Structure. 2021, Jul 1; 29(7): 768-777.e2.
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